Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1374
         (590 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    25   1.8  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   7.4  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   7.4  

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +3

Query: 9   QMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVAILG 134
           ++SH AP D + H G+ + ++     G  +    D VV++ G
Sbjct: 87  KVSHGAPNDQVRHVGD-LGNIAADENGIAKTSYSDTVVSLYG 127


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -2

Query: 289 VELDKEFAVQPNHESAR*VSRRIFSAGCVCGLIRSSRPSRRWTVTG 152
           ++ D+  A    H+  R +S+R   AG          PSRRWT +G
Sbjct: 85  LQRDELAAKMGKHDMKRGISQRSSDAG--------GEPSRRWTRSG 122


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -2

Query: 289 VELDKEFAVQPNHESAR*VSRRIFSAGCVCGLIRSSRPSRRWTVTG 152
           ++ D+  A    H+  R +S+R   AG          PSRRWT +G
Sbjct: 85  LQRDELAAKMGKHDMKRGISQRSSDAG--------GEPSRRWTRSG 122


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,967
Number of Sequences: 2352
Number of extensions: 9643
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)