Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1374
         (590 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M61157-1|AAA28495.1| 1174|Drosophila melanogaster potassium chan...    94   1e-19
AE014298-2086|AAF48410.1| 1174|Drosophila melanogaster CG10952-P...    94   1e-19
AE014298-2085|ABI30980.1| 1270|Drosophila melanogaster CG10952-P...    94   1e-19
U04246-1|AAA62472.1| 1284|Drosophila melanogaster putative potas...    49   4e-06
AE013599-2592|AAF57772.2| 1284|Drosophila melanogaster CG5076-PA...    49   4e-06
U42204-1|AAB50956.1|  855|Drosophila melanogaster putative potas...    43   4e-04
U36925-1|AAB50936.1|  855|Drosophila melanogaster seizure potass...    43   4e-04
AY058350-1|AAL13579.1|  855|Drosophila melanogaster GH12235p pro...    43   4e-04
AE013599-3790|AAF47148.1|  855|Drosophila melanogaster CG3182-PB...    43   4e-04
AE013599-3789|AAM68296.1|  855|Drosophila melanogaster CG3182-PA...    43   4e-04
AY119080-1|AAM50940.1|  207|Drosophila melanogaster LP09874p pro...    29   4.7  
AE013599-3920|AAF47243.1|  207|Drosophila melanogaster CG4741-PA...    29   4.7  
AY192578-1|AAO39845.1|  600|Drosophila melanogaster neuropeptide...    28   8.2  
AY051588-1|AAK93012.1|  600|Drosophila melanogaster GH23382p pro...    28   8.2  
AE014296-3273|AAF49074.2|  600|Drosophila melanogaster CG7395-PA...    28   8.2  

>M61157-1|AAA28495.1| 1174|Drosophila melanogaster potassium channel
           protein protein.
          Length = 1174

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +3

Query: 3   HFQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVAILGE 137
           HF MSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVAILG+
Sbjct: 586 HFMMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVAILGK 630


>AE014298-2086|AAF48410.1| 1174|Drosophila melanogaster CG10952-PA,
           isoform A protein.
          Length = 1174

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +3

Query: 3   HFQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVAILGE 137
           HF MSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVAILG+
Sbjct: 586 HFMMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVAILGK 630


>AE014298-2085|ABI30980.1| 1270|Drosophila melanogaster CG10952-PB,
           isoform B protein.
          Length = 1270

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +3

Query: 3   HFQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVAILGE 137
           HF MSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVAILG+
Sbjct: 586 HFMMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVAILGK 630


>U04246-1|AAA62472.1| 1284|Drosophila melanogaster putative
           potassium channel subunit protein.
          Length = 1284

 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 20/45 (44%), Positives = 33/45 (73%)
 Frame = +3

Query: 3   HFQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVAILGE 137
           H + +  APG+ L H G++++ + ++  GS+EVI+DD VVAILG+
Sbjct: 601 HIKTNFCAPGEYLIHKGDALNYIYYLCNGSMEVIKDDMVVAILGK 645


>AE013599-2592|AAF57772.2| 1284|Drosophila melanogaster CG5076-PA
           protein.
          Length = 1284

 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 20/45 (44%), Positives = 33/45 (73%)
 Frame = +3

Query: 3   HFQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVAILGE 137
           H + +  APG+ L H G++++ + ++  GS+EVI+DD VVAILG+
Sbjct: 601 HIKTNFCAPGEYLIHKGDALNYIYYLCNGSMEVIKDDMVVAILGK 645


>U42204-1|AAB50956.1|  855|Drosophila melanogaster putative
           potassium channel subunithomolog protein.
          Length = 855

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVA-----ILGEYVGIFPVTVHR 170
           F+ +H+ PGD+L H G+ + SL FI  GS+E+ +   +V      I GE   I+P TV +
Sbjct: 673 FKTTHAPPGDILVHRGDVLTSLYFIARGSIEIQRAGNIVVLGKNDIFGENPCIYP-TVGK 731

Query: 171 LEGL 182
             G+
Sbjct: 732 SNGV 735


>U36925-1|AAB50936.1|  855|Drosophila melanogaster seizure potassium
           channel protein.
          Length = 855

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVA-----ILGEYVGIFPVTVHR 170
           F+ +H+ PGD+L H G+ + SL FI  GS+E+ +   +V      I GE   I+P TV +
Sbjct: 673 FKTTHAPPGDILVHRGDVLTSLYFIARGSIEIQRAGNIVVLGKNDIFGENPCIYP-TVGK 731

Query: 171 LEGL 182
             G+
Sbjct: 732 SNGV 735


>AY058350-1|AAL13579.1|  855|Drosophila melanogaster GH12235p
           protein.
          Length = 855

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVA-----ILGEYVGIFPVTVHR 170
           F+ +H+ PGD+L H G+ + SL FI  GS+E+ +   +V      I GE   I+P TV +
Sbjct: 673 FKTTHAPPGDILVHRGDVLTSLYFIARGSIEIQRAGNIVVLGKNDIFGENPCIYP-TVGK 731

Query: 171 LEGL 182
             G+
Sbjct: 732 SNGV 735


>AE013599-3790|AAF47148.1|  855|Drosophila melanogaster CG3182-PB,
           isoform B protein.
          Length = 855

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVA-----ILGEYVGIFPVTVHR 170
           F+ +H+ PGD+L H G+ + SL FI  GS+E+ +   +V      I GE   I+P TV +
Sbjct: 673 FKTTHAPPGDILVHRGDVLTSLYFIARGSIEIQRAGNIVVLGKNDIFGENPCIYP-TVGK 731

Query: 171 LEGL 182
             G+
Sbjct: 732 SNGV 735


>AE013599-3789|AAM68296.1|  855|Drosophila melanogaster CG3182-PA,
           isoform A protein.
          Length = 855

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVA-----ILGEYVGIFPVTVHR 170
           F+ +H+ PGD+L H G+ + SL FI  GS+E+ +   +V      I GE   I+P TV +
Sbjct: 673 FKTTHAPPGDILVHRGDVLTSLYFIARGSIEIQRAGNIVVLGKNDIFGENPCIYP-TVGK 731

Query: 171 LEGL 182
             G+
Sbjct: 732 SNGV 735


>AY119080-1|AAM50940.1|  207|Drosophila melanogaster LP09874p
           protein.
          Length = 207

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 16/63 (25%), Positives = 30/63 (47%)
 Frame = -2

Query: 283 LDKEFAVQPNHESAR*VSRRIFSAGCVCGLIRSSRPSRRWTVTGNIPTYSPNIATTSSSC 104
           L K   + P+++ A    R+  S   +   + +S P+    +    P Y  N+ATT++S 
Sbjct: 134 LPKTLDLPPSYDEAAFSERKQDSTLTIATSLEASNPNLAVGINEPPPVYEANVATTTTST 193

Query: 103 ITS 95
            T+
Sbjct: 194 TTT 196


>AE013599-3920|AAF47243.1|  207|Drosophila melanogaster CG4741-PA
           protein.
          Length = 207

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 16/63 (25%), Positives = 30/63 (47%)
 Frame = -2

Query: 283 LDKEFAVQPNHESAR*VSRRIFSAGCVCGLIRSSRPSRRWTVTGNIPTYSPNIATTSSSC 104
           L K   + P+++ A    R+  S   +   + +S P+    +    P Y  N+ATT++S 
Sbjct: 134 LPKTLDLPPSYDEAAFSERKQDSTLTIATSLEASNPNLAVGINEPPPVYEANVATTTTST 193

Query: 103 ITS 95
            T+
Sbjct: 194 TTT 196


>AY192578-1|AAO39845.1|  600|Drosophila melanogaster neuropeptide
           F-like receptor protein.
          Length = 600

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -2

Query: 127 IATTSSSCITSRLPVTMKHNESIDSP 50
           I TTSSS  TS+LP+    N S+ SP
Sbjct: 10  ITTTSSSISTSQLPLVSTTNWSLTSP 35


>AY051588-1|AAK93012.1|  600|Drosophila melanogaster GH23382p
           protein.
          Length = 600

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -2

Query: 127 IATTSSSCITSRLPVTMKHNESIDSP 50
           I TTSSS  TS+LP+    N S+ SP
Sbjct: 10  ITTTSSSISTSQLPLVSTTNWSLTSP 35


>AE014296-3273|AAF49074.2|  600|Drosophila melanogaster CG7395-PA
           protein.
          Length = 600

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -2

Query: 127 IATTSSSCITSRLPVTMKHNESIDSP 50
           I TTSSS  TS+LP+    N S+ SP
Sbjct: 10  ITTTSSSISTSQLPLVSTTNWSLTSP 35


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,165,094
Number of Sequences: 53049
Number of extensions: 397686
Number of successful extensions: 1290
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)