Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1374
         (590 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF130443-1|AAD28468.1|  956|Caenorhabditis elegans EAG K+ channe...    77   7e-15
AF036695-1|AAB88348.2|  956|Caenorhabditis elegans Egg laying de...    77   7e-15
Z46787-22|CAO78708.1|  666|Caenorhabditis elegans Hypothetical p...    47   1e-05
Z46787-21|CAO78707.1|  714|Caenorhabditis elegans Hypothetical p...    47   1e-05
Z46787-20|CAC42257.1|  791|Caenorhabditis elegans Hypothetical p...    47   1e-05
Z46787-19|CAO78706.1|  801|Caenorhabditis elegans Hypothetical p...    47   1e-05
Z46787-18|CAO78705.1|  805|Caenorhabditis elegans Hypothetical p...    47   1e-05
Z46787-17|CAO78704.1|  863|Caenorhabditis elegans Hypothetical p...    47   1e-05
Z46787-16|CAO78703.1|  821|Caenorhabditis elegans Hypothetical p...    47   1e-05
Z46787-15|CAO78702.1|  829|Caenorhabditis elegans Hypothetical p...    47   1e-05
Z35596-8|CAO78718.1|  666|Caenorhabditis elegans Hypothetical pr...    47   1e-05
Z35596-7|CAO78717.1|  714|Caenorhabditis elegans Hypothetical pr...    47   1e-05
Z35596-6|CAA84644.2|  791|Caenorhabditis elegans Hypothetical pr...    47   1e-05
Z35596-5|CAO78716.1|  801|Caenorhabditis elegans Hypothetical pr...    47   1e-05
Z35596-4|CAO78715.1|  805|Caenorhabditis elegans Hypothetical pr...    47   1e-05
Z35596-3|CAO78714.1|  863|Caenorhabditis elegans Hypothetical pr...    47   1e-05
Z35596-2|CAO78713.1|  821|Caenorhabditis elegans Hypothetical pr...    47   1e-05
Z35596-1|CAO78712.1|  829|Caenorhabditis elegans Hypothetical pr...    47   1e-05
AF257518-1|AAF68999.1|  791|Caenorhabditis elegans HERG-like pot...    47   1e-05
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z77133-4|CAB00867.3|  232|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AY205144-1|AAO46042.2|  201|Caenorhabditis elegans NK-2 family h...    28   5.7  
Z82282-5|CAB05270.1|  555|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr...    27   7.5  
U41027-4|AAC48196.2|  455|Caenorhabditis elegans Hypothetical pr...    27   7.5  
U41027-3|AAQ82846.1|  516|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z81537-3|CAB04374.1|  348|Caenorhabditis elegans Hypothetical pr...    27   10.0 

>AF130443-1|AAD28468.1|  956|Caenorhabditis elegans EAG K+ channel
           EGL-2 protein.
          Length = 956

 Score = 77.4 bits (182), Expect = 7e-15
 Identities = 33/43 (76%), Positives = 42/43 (97%)
 Frame = +3

Query: 9   QMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVAILGE 137
           +++H+APGDLLYHTGES+D+L F+V+GSLEVIQDDEVVAILG+
Sbjct: 584 ELNHAAPGDLLYHTGESVDALWFVVSGSLEVIQDDEVVAILGK 626


>AF036695-1|AAB88348.2|  956|Caenorhabditis elegans Egg laying
           defective protein 2 protein.
          Length = 956

 Score = 77.4 bits (182), Expect = 7e-15
 Identities = 33/43 (76%), Positives = 42/43 (97%)
 Frame = +3

Query: 9   QMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVAILGE 137
           +++H+APGDLLYHTGES+D+L F+V+GSLEVIQDDEVVAILG+
Sbjct: 584 ELNHAAPGDLLYHTGESVDALWFVVSGSLEVIQDDEVVAILGK 626


>Z46787-22|CAO78708.1|  666|Caenorhabditis elegans Hypothetical
           protein C30D11.1h protein.
          Length = 666

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDE-VVAILGE 137
           F+ +HS PGD L H G+ +  L FI  GS+E++ DD  V+ ILG+
Sbjct: 436 FRTTHSPPGDTLVHRGDILTGLYFIARGSVEILNDDNTVMGILGK 480


>Z46787-21|CAO78707.1|  714|Caenorhabditis elegans Hypothetical
           protein C30D11.1g protein.
          Length = 714

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDE-VVAILGE 137
           F+ +HS PGD L H G+ +  L FI  GS+E++ DD  V+ ILG+
Sbjct: 436 FRTTHSPPGDTLVHRGDILTGLYFIARGSVEILNDDNTVMGILGK 480


>Z46787-20|CAC42257.1|  791|Caenorhabditis elegans Hypothetical
           protein C30D11.1f protein.
          Length = 791

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDE-VVAILGE 137
           F+ +HS PGD L H G+ +  L FI  GS+E++ DD  V+ ILG+
Sbjct: 436 FRTTHSPPGDTLVHRGDILTGLYFIARGSVEILNDDNTVMGILGK 480


>Z46787-19|CAO78706.1|  801|Caenorhabditis elegans Hypothetical
           protein C30D11.1e protein.
          Length = 801

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDE-VVAILGE 137
           F+ +HS PGD L H G+ +  L FI  GS+E++ DD  V+ ILG+
Sbjct: 446 FRTTHSPPGDTLVHRGDILTGLYFIARGSVEILNDDNTVMGILGK 490


>Z46787-18|CAO78705.1|  805|Caenorhabditis elegans Hypothetical
           protein C30D11.1d protein.
          Length = 805

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDE-VVAILGE 137
           F+ +HS PGD L H G+ +  L FI  GS+E++ DD  V+ ILG+
Sbjct: 450 FRTTHSPPGDTLVHRGDILTGLYFIARGSVEILNDDNTVMGILGK 494


>Z46787-17|CAO78704.1|  863|Caenorhabditis elegans Hypothetical
           protein C30D11.1c protein.
          Length = 863

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDE-VVAILGE 137
           F+ +HS PGD L H G+ +  L FI  GS+E++ DD  V+ ILG+
Sbjct: 508 FRTTHSPPGDTLVHRGDILTGLYFIARGSVEILNDDNTVMGILGK 552


>Z46787-16|CAO78703.1|  821|Caenorhabditis elegans Hypothetical
           protein C30D11.1b protein.
          Length = 821

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDE-VVAILGE 137
           F+ +HS PGD L H G+ +  L FI  GS+E++ DD  V+ ILG+
Sbjct: 466 FRTTHSPPGDTLVHRGDILTGLYFIARGSVEILNDDNTVMGILGK 510


>Z46787-15|CAO78702.1|  829|Caenorhabditis elegans Hypothetical
           protein C30D11.1a protein.
          Length = 829

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDE-VVAILGE 137
           F+ +HS PGD L H G+ +  L FI  GS+E++ DD  V+ ILG+
Sbjct: 474 FRTTHSPPGDTLVHRGDILTGLYFIARGSVEILNDDNTVMGILGK 518


>Z35596-8|CAO78718.1|  666|Caenorhabditis elegans Hypothetical
           protein C30D11.1h protein.
          Length = 666

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDE-VVAILGE 137
           F+ +HS PGD L H G+ +  L FI  GS+E++ DD  V+ ILG+
Sbjct: 436 FRTTHSPPGDTLVHRGDILTGLYFIARGSVEILNDDNTVMGILGK 480


>Z35596-7|CAO78717.1|  714|Caenorhabditis elegans Hypothetical
           protein C30D11.1g protein.
          Length = 714

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDE-VVAILGE 137
           F+ +HS PGD L H G+ +  L FI  GS+E++ DD  V+ ILG+
Sbjct: 436 FRTTHSPPGDTLVHRGDILTGLYFIARGSVEILNDDNTVMGILGK 480


>Z35596-6|CAA84644.2|  791|Caenorhabditis elegans Hypothetical
           protein C30D11.1f protein.
          Length = 791

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDE-VVAILGE 137
           F+ +HS PGD L H G+ +  L FI  GS+E++ DD  V+ ILG+
Sbjct: 436 FRTTHSPPGDTLVHRGDILTGLYFIARGSVEILNDDNTVMGILGK 480


>Z35596-5|CAO78716.1|  801|Caenorhabditis elegans Hypothetical
           protein C30D11.1e protein.
          Length = 801

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDE-VVAILGE 137
           F+ +HS PGD L H G+ +  L FI  GS+E++ DD  V+ ILG+
Sbjct: 446 FRTTHSPPGDTLVHRGDILTGLYFIARGSVEILNDDNTVMGILGK 490


>Z35596-4|CAO78715.1|  805|Caenorhabditis elegans Hypothetical
           protein C30D11.1d protein.
          Length = 805

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDE-VVAILGE 137
           F+ +HS PGD L H G+ +  L FI  GS+E++ DD  V+ ILG+
Sbjct: 450 FRTTHSPPGDTLVHRGDILTGLYFIARGSVEILNDDNTVMGILGK 494


>Z35596-3|CAO78714.1|  863|Caenorhabditis elegans Hypothetical
           protein C30D11.1c protein.
          Length = 863

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDE-VVAILGE 137
           F+ +HS PGD L H G+ +  L FI  GS+E++ DD  V+ ILG+
Sbjct: 508 FRTTHSPPGDTLVHRGDILTGLYFIARGSVEILNDDNTVMGILGK 552


>Z35596-2|CAO78713.1|  821|Caenorhabditis elegans Hypothetical
           protein C30D11.1b protein.
          Length = 821

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDE-VVAILGE 137
           F+ +HS PGD L H G+ +  L FI  GS+E++ DD  V+ ILG+
Sbjct: 466 FRTTHSPPGDTLVHRGDILTGLYFIARGSVEILNDDNTVMGILGK 510


>Z35596-1|CAO78712.1|  829|Caenorhabditis elegans Hypothetical
           protein C30D11.1a protein.
          Length = 829

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDE-VVAILGE 137
           F+ +HS PGD L H G+ +  L FI  GS+E++ DD  V+ ILG+
Sbjct: 474 FRTTHSPPGDTLVHRGDILTGLYFIARGSVEILNDDNTVMGILGK 518


>AF257518-1|AAF68999.1|  791|Caenorhabditis elegans HERG-like
           potassium channel protein.
          Length = 791

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   FQMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDE-VVAILGE 137
           F+ +HS PGD L H G+ +  L FI  GS+E++ DD  V+ ILG+
Sbjct: 436 FRTTHSPPGDTLVHRGDILTGLYFIARGSVEILNDDNTVMGILGK 480


>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical
           protein F20C5.2b protein.
          Length = 1130

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +1

Query: 124 LYWVSMWEYFRSPSIVSKVSKSELTHRHSPLRRSGEKLSEL 246
           L +V +W Y    S++ K  K     RH+   R  EK  EL
Sbjct: 744 LKYVFLWNYCHEYSVLIKFKKRSSPQRHNATERFDEKKPEL 784


>Z77133-4|CAB00867.3|  232|Caenorhabditis elegans Hypothetical
           protein K03A11.3 protein.
          Length = 232

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +3

Query: 96  EVIQDDEVVAILGEYVGIFPVTVHRLEGLEERINPQTQPAEKIRRETQRADSWLGCTA 269
           EVIQ  +  A+  E+    P  ++  EG ++  +  T P + +    QR +S LG ++
Sbjct: 47  EVIQPPQQSAVPSEFKNTLPSRLNLFEGFDQSFSELTNPYQPVIPLMQR-ESLLGASS 103


>AY205144-1|AAO46042.2|  201|Caenorhabditis elegans NK-2 family
           homeodomain proteinCEH-28 protein.
          Length = 201

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +3

Query: 96  EVIQDDEVVAILGEYVGIFPVTVHRLEGLEERINPQTQPAEKIRRETQRADSWLGCTA 269
           EVIQ  +  A+  E+    P  ++  EG ++  +  T P + +    QR +S LG ++
Sbjct: 16  EVIQPPQQSAVPSEFKNTLPSRLNLFEGFDQSFSELTNPYQPVIPLMQR-ESLLGASS 72


>Z82282-5|CAB05270.1|  555|Caenorhabditis elegans Hypothetical
           protein T07G12.5 protein.
          Length = 555

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 166 WTVTGNIPTYSPNIATTSSSCITSRLPVTM 77
           W V   + TY+ NIA  S + +TSR+ + M
Sbjct: 331 WGVGTGVTTYAENIAIMSVTKVTSRITMQM 360


>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
           protein F07A11.4 protein.
          Length = 1095

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = -2

Query: 202 CGLIRSSRPSRRWTVTGNIPTYSPNIATTSSSCITSRLPVTMKHNESIDSPVWYSRS 32
           C  IRSS  SR +T + N   YSP+  T +   I+  L  T   + + D+P   S S
Sbjct: 17  CSSIRSSNYSRSYTPSFNTFKYSPSSYTPN---ISRNLNTTSTGSTTSDTPKLSSSS 70


>U41027-4|AAC48196.2|  455|Caenorhabditis elegans Hypothetical
           protein R08E3.3a protein.
          Length = 455

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 171 LEGLEERINPQTQPAEKIRRETQRAD 248
           LEG++ERI      AEK+R++  + D
Sbjct: 340 LEGVDERIESNVMLAEKLRKKLSKID 365


>U41027-3|AAQ82846.1|  516|Caenorhabditis elegans Hypothetical
           protein R08E3.3b protein.
          Length = 516

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 171 LEGLEERINPQTQPAEKIRRETQRAD 248
           LEG++ERI      AEK+R++  + D
Sbjct: 340 LEGVDERIESNVMLAEKLRKKLSKID 365


>Z81537-3|CAB04374.1|  348|Caenorhabditis elegans Hypothetical
           protein F41D3.3 protein.
          Length = 348

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
 Frame = +1

Query: 130 WV-SMWEYFRSPSIVSKVSKSELTHRHS--PLRRSGEKLSELI 249
           W+ S WE+ +SP ++  + +S L + +S   +  + ++LSE I
Sbjct: 205 WLDSAWEFSKSPELLFALGRSNLNNLNSLNNMNNTNQELSEFI 247


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,321,305
Number of Sequences: 27780
Number of extensions: 201421
Number of successful extensions: 669
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)