Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1373
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          26   0.25 
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   3.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.0  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   9.3  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.3  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.3  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -2

Query: 382 STPYGSVDRSSPPSLPSNRCGSRNRS--TTSLAPPLYTGSASKR 257
           S  Y S++ ++PP  P  R  S   +  T S  PPLY    +KR
Sbjct: 720 SISYLSMENNAPPPPPPPRVESFAETVRTVSKIPPLYKDLVAKR 763


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 360 STDPYGVLPLWRSNDLN 410
           + DPYG++  W ++ LN
Sbjct: 141 AVDPYGLVAQWATDALN 157


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 340 LPSNRCGSRNRSTTSLAPPLYTGSA 266
           LP++RC SR  S + + P   +G +
Sbjct: 79  LPNSRCNSRESSDSLVQPRCPSGES 103


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 597 PRSWVWKLAASTRPHITPS*SATWTSV 517
           PRS++  L+ S R H+    SA  T++
Sbjct: 196 PRSYIPPLSTSMRSHLCNWGSANSTNI 222


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 597 PRSWVWKLAASTRPHITPS*SATWTSV 517
           PRS++  L+ S R H+    SA  T++
Sbjct: 356 PRSYIPPLSTSMRSHLCNWGSANSTNI 382


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 597 PRSWVWKLAASTRPHITPS*SATWTSV 517
           PRS++  L+ S R H+    SA  T++
Sbjct: 356 PRSYIPPLSTSMRSHLCNWGSANSTNI 382


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,128
Number of Sequences: 336
Number of extensions: 3734
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)