Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1373
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 177 8e-45
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 177 8e-45
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 177 8e-45
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 176 1e-44
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 176 1e-44
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 176 1e-44
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 176 1e-44
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 176 1e-44
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 176 1e-44
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 171 5e-43
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 167 8e-42
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 96 2e-20
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 93 2e-19
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 71 1e-12
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 61 8e-10
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 42 5e-04
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.57
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.57
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.57
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 4.0
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 4.0
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 4.0
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 177 bits (430), Expect = 8e-45
Identities = 96/142 (67%), Positives = 102/142 (71%), Gaps = 4/142 (2%)
Frame = -1
Query: 677 KSYELPDGSGHHYRKRKIPLPRGSLPTLVLGYGSLR-HPRDHI*LHH---EVRRGHP*GL 510
KSYELPDG + P LG S H + + ++R+ L
Sbjct: 239 KSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----L 294
Query: 509 DANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 330
ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 295 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 354
Query: 329 QMWISKQEYDESGPSIVHRKCF 264
QMWISKQEYDESGPSIVHRKCF
Sbjct: 355 QMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 177 bits (430), Expect = 8e-45
Identities = 96/142 (67%), Positives = 102/142 (71%), Gaps = 4/142 (2%)
Frame = -1
Query: 677 KSYELPDGSGHHYRKRKIPLPRGSLPTLVLGYGSLR-HPRDHI*LHH---EVRRGHP*GL 510
KSYELPDG + P LG S H + + ++R+ L
Sbjct: 239 KSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----L 294
Query: 509 DANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 330
ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 295 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 354
Query: 329 QMWISKQEYDESGPSIVHRKCF 264
QMWISKQEYDESGPSIVHRKCF
Sbjct: 355 QMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 177 bits (430), Expect = 8e-45
Identities = 96/142 (67%), Positives = 102/142 (71%), Gaps = 4/142 (2%)
Frame = -1
Query: 677 KSYELPDGSGHHYRKRKIPLPRGSLPTLVLGYGSLR-HPRDHI*LHH---EVRRGHP*GL 510
KSYELPDG + P LG S H + + ++R+ L
Sbjct: 239 KSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----L 294
Query: 509 DANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 330
ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 295 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 354
Query: 329 QMWISKQEYDESGPSIVHRKCF 264
QMWISKQEYDESGPSIVHRKCF
Sbjct: 355 QMWISKQEYDESGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 176 bits (429), Expect = 1e-44
Identities = 96/142 (67%), Positives = 102/142 (71%), Gaps = 4/142 (2%)
Frame = -1
Query: 677 KSYELPDGSGHHYRKRKIPLPRGSLPTLVLGYGSLR-HPRDHI*LHH---EVRRGHP*GL 510
KSYELPDG + P LG S H + + ++R+ L
Sbjct: 239 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----L 294
Query: 509 DANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 330
ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 295 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 354
Query: 329 QMWISKQEYDESGPSIVHRKCF 264
QMWISKQEYDESGPSIVHRKCF
Sbjct: 355 QMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 176 bits (429), Expect = 1e-44
Identities = 96/142 (67%), Positives = 102/142 (71%), Gaps = 4/142 (2%)
Frame = -1
Query: 677 KSYELPDGSGHHYRKRKIPLPRGSLPTLVLGYGSLR-HPRDHI*LHH---EVRRGHP*GL 510
KSYELPDG + P LG S H + + ++R+ L
Sbjct: 239 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----L 294
Query: 509 DANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 330
ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 295 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 354
Query: 329 QMWISKQEYDESGPSIVHRKCF 264
QMWISKQEYDESGPSIVHRKCF
Sbjct: 355 QMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 176 bits (429), Expect = 1e-44
Identities = 96/142 (67%), Positives = 102/142 (71%), Gaps = 4/142 (2%)
Frame = -1
Query: 677 KSYELPDGSGHHYRKRKIPLPRGSLPTLVLGYGSLR-HPRDHI*LHH---EVRRGHP*GL 510
KSYELPDG + P LG S H + + ++R+ L
Sbjct: 239 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----L 294
Query: 509 DANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 330
ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 295 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 354
Query: 329 QMWISKQEYDESGPSIVHRKCF 264
QMWISKQEYDESGPSIVHRKCF
Sbjct: 355 QMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 176 bits (429), Expect = 1e-44
Identities = 96/142 (67%), Positives = 102/142 (71%), Gaps = 4/142 (2%)
Frame = -1
Query: 677 KSYELPDGSGHHYRKRKIPLPRGSLPTLVLGYGSLR-HPRDHI*LHH---EVRRGHP*GL 510
KSYELPDG + P LG S H + + ++R+ L
Sbjct: 195 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----L 250
Query: 509 DANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 330
ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 251 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 310
Query: 329 QMWISKQEYDESGPSIVHRKCF 264
QMWISKQEYDESGPSIVHRKCF
Sbjct: 311 QMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 176 bits (429), Expect = 1e-44
Identities = 96/142 (67%), Positives = 102/142 (71%), Gaps = 4/142 (2%)
Frame = -1
Query: 677 KSYELPDGSGHHYRKRKIPLPRGSLPTLVLGYGSLR-HPRDHI*LHH---EVRRGHP*GL 510
KSYELPDG + P LG S H + + ++R+ L
Sbjct: 225 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----L 280
Query: 509 DANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 330
ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 281 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 340
Query: 329 QMWISKQEYDESGPSIVHRKCF 264
QMWISKQEYDESGPSIVHRKCF
Sbjct: 341 QMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 176 bits (429), Expect = 1e-44
Identities = 96/142 (67%), Positives = 102/142 (71%), Gaps = 4/142 (2%)
Frame = -1
Query: 677 KSYELPDGSGHHYRKRKIPLPRGSLPTLVLGYGSLR-HPRDHI*LHH---EVRRGHP*GL 510
KSYELPDG + P LG S H + + ++R+ L
Sbjct: 239 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----L 294
Query: 509 DANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 330
ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 295 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 354
Query: 329 QMWISKQEYDESGPSIVHRKCF 264
QMWISKQEYDESGPSIVHRKCF
Sbjct: 355 QMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 171 bits (415), Expect = 5e-43
Identities = 95/142 (66%), Positives = 101/142 (71%), Gaps = 4/142 (2%)
Frame = -1
Query: 677 KSYELPDGSGHHYRKRKIPLPRGSLPTLVLGYGSLR-HPRDHI*LHH---EVRRGHP*GL 510
KSYELPDG + P LG S H + + ++R+ L
Sbjct: 239 KSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----L 294
Query: 509 DANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 330
ANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 295 YANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQ 353
Query: 329 QMWISKQEYDESGPSIVHRKCF 264
QMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 167 bits (405), Expect = 8e-42
Identities = 91/142 (64%), Positives = 101/142 (71%), Gaps = 4/142 (2%)
Frame = -1
Query: 677 KSYELPDGSGHHYRKRKIPLPRGSLPTLVLGY-GSLRHPRDHI*LHH---EVRRGHP*GL 510
KSYELPDG + P +G G+ H + + ++R+ L
Sbjct: 238 KSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKD----L 293
Query: 509 DANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 330
ANTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 294 YANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 353
Query: 329 QMWISKQEYDESGPSIVHRKCF 264
QMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QMWISKQEYDESGPSIVHRKCF 375
Score = 101 bits (242), Expect = 5e-22
Identities = 44/51 (86%), Positives = 46/51 (90%)
Frame = -2
Query: 661 PTGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDL 509
P GQVITIGNERFRCPE LFQP+F+GME GIHETTY SIMKCDVDIRKDL
Sbjct: 243 PDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDL 293
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/85 (50%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Frame = -1
Query: 512 LDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASL 342
L +N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL
Sbjct: 351 LFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSL 410
Query: 341 STFQQMWISKQEYDESGPSIVHRKC 267
TFQQMW+SK EYDESG SIV +KC
Sbjct: 411 GTFQQMWVSKAEYDESGKSIVEKKC 435
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
Frame = -2
Query: 664 FPTGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDL 509
FP G G ER + PE LF +L E + + S D+DIR L
Sbjct: 295 FPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTL 351
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/83 (49%), Positives = 59/83 (71%)
Frame = -1
Query: 512 LDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 333
L +N VLSGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF
Sbjct: 292 LYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTF 351
Query: 332 QQMWISKQEYDESGPSIVHRKCF 264
++MW+ K+EY++ G S +H++ F
Sbjct: 352 RKMWLGKKEYEDMGASAMHKRFF 374
Score = 50.8 bits (116), Expect = 9e-07
Identities = 24/51 (47%), Positives = 29/51 (56%)
Frame = -2
Query: 661 PTGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDL 509
P I I N FR PE LF+P +G E G+ SIMKCDVD+R+ L
Sbjct: 242 PDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTL 292
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 70.5 bits (165), Expect = 1e-12
Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 13/82 (15%)
Frame = -1
Query: 497 VLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSIL 351
VLSGGTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++L
Sbjct: 302 VLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVL 361
Query: 350 ASL--STFQQMWISKQEYDESG 291
A+L Q W+SK+EY+E G
Sbjct: 362 ANLMKDRDQDFWVSKKEYEEGG 383
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = -2
Query: 661 PTGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKD 512
P G+VI +G ERF PE LFQP + +E G+ E + I D+D R D
Sbjct: 247 PDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLD 296
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 60.9 bits (141), Expect = 8e-10
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 16/94 (17%)
Frame = -1
Query: 515 GLDANTVLSGGTTMYPGIADRMQKEITALA----------------PSTMKIKIIAPPER 384
GL N VLSGG+TM+ A ++Q+++ L+ P + +++I+ +
Sbjct: 321 GLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQ 380
Query: 383 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 282
+Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 381 RYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
Score = 35.1 bits (77), Expect = 0.046
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -2
Query: 646 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDL 509
+ +G ERF PE F P F E I +T I +C +D+R+ L
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGL 322
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/66 (34%), Positives = 44/66 (66%)
Frame = -1
Query: 503 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 324
N L+GG ++ PGIA+++++E++ + P+T+ ++ P R + ++G I+AS STF+
Sbjct: 474 NIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDS 533
Query: 323 WISKQE 306
IS Q+
Sbjct: 534 CISLQQ 539
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = -2
Query: 640 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDL 509
I N RF C E LF+P G++ G+H+ + +I++C +D R+ L
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTL 471
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = -2
Query: 646 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDL 509
I +G ERF PE LF PS + ++ CG+ E SI +C +R L
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPAL 308
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = -1
Query: 512 LDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASL 342
L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--L 363
Query: 341 STFQQMWISKQEYDESGPSIVHRKCF*T 258
+ + WI+++++DE G S+ F T
Sbjct: 364 TASKVPWINRKDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = -2
Query: 646 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDL 509
I +G ERF PE LF PS + ++ CG+ E SI +C +R L
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPAL 308
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = -1
Query: 512 LDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASL 342
L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--L 363
Query: 341 STFQQMWISKQEYDESGPSIVHRKCF*T 258
+ + WI+++++DE G S+ F T
Sbjct: 364 TASKVPWINRKDWDERGDSLEFSNFFQT 391
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 369 PYGVLPLWRSNDLNLHCRWGESCD 440
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 369 PYGVLPLWRSNDLNLHCRWGESCD 440
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 369 PYGVLPLWRSNDLNLHCRWGESCD 440
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 31.1 bits (67), Expect = 0.76
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Frame = -1
Query: 503 NTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK----YSVWIGGSIL 351
N +L+GG + PG+ R+++EI + + KI +I E K + W+G S+L
Sbjct: 212 NILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWLGASLL 271
Query: 350 ASL-STFQQMWISKQEY 303
SL T ++ ++ +E+
Sbjct: 272 GSLRETIERKSLTLEEW 288
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 638 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 525
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 638 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 525
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 638 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 525
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 638 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 525
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 638 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 525
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,701,949
Number of Sequences: 27780
Number of extensions: 342125
Number of successful extensions: 921
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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