Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1373
(677 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 161 5e-40
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 159 1e-39
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 159 1e-39
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 159 1e-39
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 156 1e-38
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 156 1e-38
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 155 3e-38
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 155 3e-38
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 142 2e-34
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 135 2e-32
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 120 7e-28
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 113 1e-25
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 89 3e-18
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 79 2e-15
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 65 5e-11
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 59 3e-09
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 49 3e-06
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 47 1e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 2e-04
At5g43500.2 68418.m05318 expressed protein 31 0.53
At5g43500.1 68418.m05319 expressed protein 31 0.53
At4g30340.1 68417.m04312 diacylglycerol kinase family protein co... 31 0.53
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 30 1.2
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 30 1.2
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 29 2.1
At2g18730.1 68415.m02181 diacylglycerol kinase, putative contain... 29 2.1
At4g10290.1 68417.m01692 hypothetical protein 29 2.8
At4g00750.1 68417.m00102 dehydration-responsive family protein s... 29 3.7
At2g39440.1 68415.m04841 expressed protein 29 3.7
At2g42760.1 68415.m05295 expressed protein 28 4.9
At2g07240.1 68415.m00831 Ulp1 protease family protein contains P... 27 8.6
At1g64960.1 68414.m07363 expressed protein 27 8.6
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 161 bits (390), Expect = 5e-40
Identities = 84/141 (59%), Positives = 98/141 (69%), Gaps = 3/141 (2%)
Frame = -1
Query: 677 KSYELPDGSGHHYRKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRGHP*---GLD 507
K+YELPDG + P ++G + P H ++ + + L
Sbjct: 240 KNYELPDGQVITIGAERFRCPEVLFQPSLIG---MEAPGIHETTYNSIMKCDVDIRKDLY 296
Query: 506 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ 327
N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQ
Sbjct: 297 GNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 356
Query: 326 MWISKQEYDESGPSIVHRKCF 264
MWISK EYDESGPSIVHRKCF
Sbjct: 357 MWISKSEYDESGPSIVHRKCF 377
Score = 99 bits (238), Expect = 1e-21
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = -2
Query: 661 PTGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDL 509
P GQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDL
Sbjct: 245 PDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDL 295
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 159 bits (387), Expect = 1e-39
Identities = 73/83 (87%), Positives = 78/83 (93%)
Frame = -1
Query: 512 LDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 333
L N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 332 QQMWISKQEYDESGPSIVHRKCF 264
QQMWI+K EYDESGPSIVHRKCF
Sbjct: 355 QQMWIAKAEYDESGPSIVHRKCF 377
Score = 98.7 bits (235), Expect = 3e-21
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = -2
Query: 661 PTGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDL 509
P GQVITIG+ERFRCPE L+QPS +GME GIHETTYNSIMKCDVDIRKDL
Sbjct: 245 PDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDL 295
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 159 bits (387), Expect = 1e-39
Identities = 73/83 (87%), Positives = 78/83 (93%)
Frame = -1
Query: 512 LDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 333
L N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 332 QQMWISKQEYDESGPSIVHRKCF 264
QQMWI+K EYDESGPSIVHRKCF
Sbjct: 355 QQMWIAKAEYDESGPSIVHRKCF 377
Score = 101 bits (242), Expect = 4e-22
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = -2
Query: 661 PTGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDL 509
P GQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDL
Sbjct: 245 PDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDL 295
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 159 bits (387), Expect = 1e-39
Identities = 73/83 (87%), Positives = 78/83 (93%)
Frame = -1
Query: 512 LDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 333
L N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 332 QQMWISKQEYDESGPSIVHRKCF 264
QQMWI+K EYDESGPSIVHRKCF
Sbjct: 355 QQMWIAKAEYDESGPSIVHRKCF 377
Score = 98.7 bits (235), Expect = 3e-21
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = -2
Query: 661 PTGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDL 509
P GQVITIG+ERFRCPE L+QPS +GME GIHETTYNSIMKCDVDIRKDL
Sbjct: 245 PDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDL 295
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 156 bits (379), Expect = 1e-38
Identities = 82/141 (58%), Positives = 97/141 (68%), Gaps = 3/141 (2%)
Frame = -1
Query: 677 KSYELPDGSGHHYRKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRGHP*---GLD 507
KS+ELPDG + P ++G + +P H ++ + + L
Sbjct: 240 KSFELPDGQVITIGAERFRCPEVLFQPSMIG---MENPGIHETTYNSIMKCDVDIRKDLY 296
Query: 506 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ 327
N VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQ
Sbjct: 297 GNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 356
Query: 326 MWISKQEYDESGPSIVHRKCF 264
MWI+K EYDESGPSIVHRKCF
Sbjct: 357 MWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 156 bits (379), Expect = 1e-38
Identities = 82/141 (58%), Positives = 97/141 (68%), Gaps = 3/141 (2%)
Frame = -1
Query: 677 KSYELPDGSGHHYRKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRGHP*---GLD 507
KS+ELPDG + P ++G + +P H ++ + + L
Sbjct: 240 KSFELPDGQVITIGAERFRCPEVLFQPSMIG---MENPGIHETTYNSIMKCDVDIRKDLY 296
Query: 506 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ 327
N VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQ
Sbjct: 297 GNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 356
Query: 326 MWISKQEYDESGPSIVHRKCF 264
MWI+K EYDESGPSIVHRKCF
Sbjct: 357 MWIAKAEYDESGPSIVHRKCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 155 bits (375), Expect = 3e-38
Identities = 71/83 (85%), Positives = 76/83 (91%)
Frame = -1
Query: 512 LDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 333
L N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 332 QQMWISKQEYDESGPSIVHRKCF 264
QQMWISK EYDE+GP IVHRKCF
Sbjct: 355 QQMWISKAEYDEAGPGIVHRKCF 377
Score = 103 bits (246), Expect = 1e-22
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = -2
Query: 661 PTGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDL 509
P GQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDL
Sbjct: 245 PDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDL 295
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 155 bits (375), Expect = 3e-38
Identities = 71/83 (85%), Positives = 76/83 (91%)
Frame = -1
Query: 512 LDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 333
L N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 332 QQMWISKQEYDESGPSIVHRKCF 264
QQMWISK EYDE+GP IVHRKCF
Sbjct: 355 QQMWISKAEYDEAGPGIVHRKCF 377
Score = 103 bits (246), Expect = 1e-22
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = -2
Query: 661 PTGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDL 509
P GQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDL
Sbjct: 245 PDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDL 295
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 142 bits (344), Expect = 2e-34
Identities = 64/83 (77%), Positives = 72/83 (86%)
Frame = -1
Query: 512 LDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 333
L N VLSGGTTM+PGIADRM KEI ALAP +MKIK++APPERKYSVW+GGSILASLS+F
Sbjct: 296 LYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSF 355
Query: 332 QQMWISKQEYDESGPSIVHRKCF 264
MWI+K EYDE G +IVHRKCF
Sbjct: 356 APMWITKAEYDEQGGAIVHRKCF 378
Score = 95.9 bits (228), Expect = 2e-20
Identities = 43/51 (84%), Positives = 44/51 (86%)
Frame = -2
Query: 661 PTGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDL 509
P GQVITIG ERFRCPE LFQ S +GME GIHETTYNSIMKCDVDIRKDL
Sbjct: 246 PDGQVITIGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRKDL 296
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 135 bits (327), Expect = 2e-32
Identities = 61/83 (73%), Positives = 72/83 (86%)
Frame = -1
Query: 512 LDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 333
L N VLSGGTTM+ GI +RM KEI ALA + M+IKI+APPERKYSVWIGGSILASLST+
Sbjct: 247 LYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTY 306
Query: 332 QQMWISKQEYDESGPSIVHRKCF 264
+QMWI+K EY+E+GP+IVH KCF
Sbjct: 307 EQMWITKAEYEENGPAIVHTKCF 329
Score = 93.9 bits (223), Expect = 9e-20
Identities = 42/51 (82%), Positives = 43/51 (84%)
Frame = -2
Query: 661 PTGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDL 509
P GQVITIG ERFRCPE LFQPS +GME GIHE TYNSIMKCD DIRKDL
Sbjct: 197 PDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDL 247
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 120 bits (290), Expect = 7e-28
Identities = 52/79 (65%), Positives = 65/79 (82%)
Frame = -1
Query: 503 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 324
N +++GGTTM GI +RM KE+ AL PS+MK+K++ PPE + SVWIGGSILASLSTF QM
Sbjct: 287 NILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQM 346
Query: 323 WISKQEYDESGPSIVHRKC 267
WI+K EY+E G +IVHRKC
Sbjct: 347 WITKDEYEEHGAAIVHRKC 365
Score = 74.9 bits (176), Expect = 4e-14
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = -2
Query: 661 PTGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDL 509
P GQ ITI ERF CPE LFQPS +G E+ GIHE T NSI+KC VD R+D+
Sbjct: 234 PDGQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRDM 284
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 113 bits (272), Expect = 1e-25
Identities = 54/67 (80%), Positives = 60/67 (89%)
Frame = -1
Query: 512 LDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 333
L N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 332 QQMWISK 312
QQ+ I +
Sbjct: 355 QQVKIDQ 361
Score = 103 bits (246), Expect = 1e-22
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = -2
Query: 661 PTGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDL 509
P GQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDL
Sbjct: 245 PDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDL 295
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 88.6 bits (210), Expect = 3e-18
Identities = 39/85 (45%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Frame = -1
Query: 512 LDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP---PERKYSVWIGGSILASL 342
L ++ +L+GGT+ + +R++K++ +P + ++K++A ER++SVWIGGSILASL
Sbjct: 356 LYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASL 415
Query: 341 STFQQMWISKQEYDESGPSIVHRKC 267
+FQQMW SK EY+E G S + RKC
Sbjct: 416 GSFQQMWFSKSEYEEHGASYIQRKC 440
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 12/63 (19%)
Frame = -2
Query: 661 PTGQVITIGNERFRCPEALFQPSFL----GME--------ACGIHETTYNSIMKCDVDIR 518
P GQ + IG +RF+ P+ +F PS + GME G+ SI KCDVDIR
Sbjct: 294 PDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCDVDIR 353
Query: 517 KDL 509
++L
Sbjct: 354 REL 356
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 79.4 bits (187), Expect = 2e-15
Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Frame = -1
Query: 503 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASL 342
NTVL GGTT G R QKE L S ++ ++ PPE YS W+GG+ILA +
Sbjct: 279 NTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKV 337
Query: 341 STFQQMWISKQEYDESGPSIVHRKCF 264
Q ++K +YDE+GPS+VHRKCF
Sbjct: 338 VFPQNQHVTKADYDETGPSVVHRKCF 363
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = -2
Query: 661 PTGQVITIGNERFRCPEALFQPSFLGMEACGIHE 560
P GQVI+IG ER+ EALFQPS LG+E GI E
Sbjct: 226 PDGQVISIGRERYSVGEALFQPSILGLEEHGIVE 259
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 64.9 bits (151), Expect = 5e-11
Identities = 28/78 (35%), Positives = 47/78 (60%)
Frame = -1
Query: 497 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 318
+L+GG+T++P + +R++ E+ L P +KI + VW GGS+LAS F+ M +
Sbjct: 343 ILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCV 402
Query: 317 SKQEYDESGPSIVHRKCF 264
+K EY+E G + R+ F
Sbjct: 403 TKAEYEELGSARCRRRFF 420
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = -2
Query: 646 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 533
I + NERF PE LFQP+ LGM G+ E +I C
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSC 330
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 58.8 bits (136), Expect = 3e-09
Identities = 31/87 (35%), Positives = 55/87 (63%), Gaps = 12/87 (13%)
Frame = -1
Query: 497 VLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPERKYSVWIGGSIL 351
VLSGG+TMYPG+ R++KEI T L + ++++I PP RK+ V++GG++L
Sbjct: 299 VLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVL 358
Query: 350 AS-LSTFQQMWISKQEYDESGPSIVHR 273
A + + WI++++Y E G + +++
Sbjct: 359 AGIMKDAPEFWINREDYMEEGINCLNK 385
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = -2
Query: 661 PTGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIR 518
P G+VI +G ERF+ PEALF P + +E G+ + + I + D+D R
Sbjct: 244 PDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNR 291
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 16/90 (17%)
Frame = -1
Query: 503 NTVLSGGTTMYPGIADRMQKEITALAPSTM----------------KIKIIAPPERKYSV 372
N VLSGG+TM+ R+Q+++ + + + ++ +++ P ++++V
Sbjct: 327 NIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAV 386
Query: 371 WIGGSILASLSTFQQMWISKQEYDESGPSI 282
W GGS+L+S F +K+EY+E G SI
Sbjct: 387 WFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/68 (30%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Frame = -1
Query: 497 VLSGGTTMYPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLSTFQQM 324
VL+GG+ PG+++R+++E+ PS++ I++I PP + W G ++++LS F
Sbjct: 396 VLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGP 455
Query: 323 W-ISKQEY 303
W I+++++
Sbjct: 456 WCITRKQF 463
Score = 35.1 bits (77), Expect = 0.043
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 643 TIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCD 530
T+ ERF+ E LFQP GM A +H+ + CD
Sbjct: 344 TLSKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCD 381
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = -2
Query: 646 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVD 524
I IG ERFRCPE LF P+ +G++ G+ E SI + D
Sbjct: 589 IVIGIERFRCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHD 629
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = -1
Query: 512 LDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 333
L ++ +++GG ++ PG+ +R++ I + P I ++ + W G S A+ F
Sbjct: 637 LTSSILMTGGCSLLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNF 696
Query: 332 QQMWISKQEYDESG 291
+K +YDE G
Sbjct: 697 LGNAFTKMDYDEKG 710
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -1
Query: 494 LSGGTTMYPGIADRMQKEITALAPSTMKIKII----APPERKYSVWIGGSILASLSTFQQ 327
L GG + G+ +++ + P T I + + E ++ W GG+IL L ++
Sbjct: 488 LIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGRE 547
Query: 326 MWISKQEYDESG 291
WI + ++ +G
Sbjct: 548 AWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -1
Query: 494 LSGGTTMYPGIADRMQKEITALAPSTMKIKII----APPERKYSVWIGGSILASLSTFQQ 327
L GG + G+ +++ + P T I + + E ++ W GG+IL L ++
Sbjct: 500 LIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGRE 559
Query: 326 MWISKQEYDESG 291
WI + ++ +G
Sbjct: 560 AWIERHQWMVNG 571
>At4g30340.1 68417.m04312 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 374
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 369 PYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVHGGTTG 491
P GV+PL NDL+ WG S F + +H T G
Sbjct: 192 PVGVIPLGTGNDLSRSFSWGGSFPFAWRSAMKRTLHRATLG 232
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +3
Query: 360 STDPYGVLPLWRSNDLNLHCRW-GESCDFLLHTVGDSRVHGGTTGQYGVGVKSL 518
S DP GVL W HC W G +CD H V S + G + +L
Sbjct: 42 SNDPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVSLLEKQLEGVLSPAIANL 95
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 366 DPYGVLPLWRSNDLNLHCRW-GESCD 440
DP GVL W S+ + HC W G SC+
Sbjct: 45 DPNGVLSSWVSDSSSNHCSWYGVSCN 70
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = -1
Query: 548 LHHEVRRGHP*GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 375
++ E+ HP L G + +YP ++K+ L ++ K + PP+RK++
Sbjct: 340 IYREILEYHPQLLKDYMNSEGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPPDRKHA 397
>At2g18730.1 68415.m02181 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 488
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 369 PYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVHGGTTG 491
P GV+PL NDL+ WG S F + +H + G
Sbjct: 189 PVGVIPLGTGNDLSRSFGWGGSFPFAWRSAVKRTLHRASMG 229
>At4g10290.1 68417.m01692 hypothetical protein
Length = 120
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 504 GVKSLRMSTSHFMMELYVVSWMPQASIPKNEGWK 605
GVK +R ++ + EL V SW S+P+ WK
Sbjct: 19 GVKVMRQTSDAKLAELGVTSWQLWESMPRKFPWK 52
>At4g00750.1 68417.m00102 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -3
Query: 405 DHCSSREEVLRMDRWIDPRLPLYLPTDVDLETGVRRV 295
D C + +L MDR + P+ + + D+D+ T V+++
Sbjct: 555 DRCDMEDILLEMDRILRPKGSVIIRDDIDVLTKVKKI 591
>At2g39440.1 68415.m04841 expressed protein
Length = 773
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 315 RDP-HLLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCD 440
R+P G E GEDR DP + + R NDL + + + D
Sbjct: 39 REPGEFAAGMEEGEDRPIDPISDIDITRINDLMFNSNFRAAAD 81
>At2g42760.1 68415.m05295 expressed protein
Length = 267
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 444 GNHSSRPIDNED*DHCSSREEVLRMDRWIDPRLPL-YLPTDVDLETGVRRVW 292
GN ++RP +E DHC R+ ++ I R+P ++VDL+ + R+W
Sbjct: 207 GNRAARPYLSEAWDHCGGRKGKKQITPEIKWRVPAPAAASEVDLKDNL-RLW 257
>At2g07240.1 68415.m00831 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 928
Score = 27.5 bits (58), Expect = 8.6
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +3
Query: 159 VNYNNILRTIKLTEITSL--N*AAGRGLLEAATRVRLEALPVYNGGARLVVLLFRDPHLL 332
+++ ++ +IK E+ L A +GLL A V LEA+P G ++ ++ D
Sbjct: 111 LSFEMMMTSIKEREVEQLATTCVAVQGLLYALQLVVLEAVPAIQEGPQIDEVVLSD---- 166
Query: 333 EGREGGEDRSTDPYGVLPLWRSNDLNLHC 419
E D +T P L L + +++ +C
Sbjct: 167 SDAEAAADVATRPGVALKLGNAKNVDSNC 195
>At1g64960.1 68414.m07363 expressed protein
Length = 1168
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 497 RCWRQVLTDVHVALHDGVICGLVDAASFHTQERGLEESL 613
R W++V D+ + DG + G++D+A H SL
Sbjct: 284 RAWKEVELDLKGEIEDGFLQGIIDSA-IHASSSAFAASL 321
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,096,408
Number of Sequences: 28952
Number of extensions: 333427
Number of successful extensions: 970
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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