Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1372
(676 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 27 0.16
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 25 0.66
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 25 0.66
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 25 0.66
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 24 1.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 24 1.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 24 1.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 24 1.5
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 3.5
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 4.7
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 4.7
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 4.7
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 4.7
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 4.7
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 4.7
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 4.7
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 4.7
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 4.7
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 4.7
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 4.7
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 4.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 6.1
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 6.1
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 27.1 bits (57), Expect = 0.16
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 551 KYRHSNNRLTKKLLYLNSVGLTDRIP 628
KY ++NN KKL Y N + ++IP
Sbjct: 103 KYNYNNNNYNKKLYYKNYIINIEQIP 128
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 25.0 bits (52), Expect = 0.66
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 542 LKIKYRHSNNRLTKKLLYLNSVGLTDRIPKHXSGHW 649
L+ ++ ++N+L KL + +RI + +GHW
Sbjct: 44 LQALFQPTDNKLAMKLFGSKKALMKERIRQKAAGHW 79
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 25.0 bits (52), Expect = 0.66
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 542 LKIKYRHSNNRLTKKLLYLNSVGLTDRIPKHXSGHW 649
L+ ++ ++N+L KL + +RI + +GHW
Sbjct: 44 LQALFQPTDNKLAMKLFGSKKALMKERIRQKAAGHW 79
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 25.0 bits (52), Expect = 0.66
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 542 LKIKYRHSNNRLTKKLLYLNSVGLTDRIPKHXSGHW 649
L+ ++ ++N+L KL + +RI + +GHW
Sbjct: 44 LQALFQPTDNKLAMKLFGSKKALMKERIRQKAAGHW 79
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 551 KYRHSNNRLTKKLLYLNSVGLTDRIP 628
KY ++NN KKL Y ++ ++IP
Sbjct: 96 KYNYNNNNYNKKLYY--NINYIEQIP 119
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 551 KYRHSNNRLTKKLLYLNSVGLTDRIP 628
KY ++NN KKL Y ++ ++IP
Sbjct: 96 KYNYNNNNYNKKLYY--NINYIEQIP 119
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 551 KYRHSNNRLTKKLLYLNSVGLTDRIP 628
KY ++NN KKL Y ++ ++IP
Sbjct: 96 KYNYNNNNYNKKLYY--NINYIEQIP 119
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 551 KYRHSNNRLTKKLLYLNSVGLTDRIP 628
KY ++NN KKL Y ++ ++IP
Sbjct: 96 KYNYNNNNYNKKLYY--NINYIEQIP 119
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 554 YRHSNNRLTKKLLYLNSVGLTDRIP 628
Y+++ N KKL Y N + ++IP
Sbjct: 329 YKYNYNNYNKKLYYKNYIINIEQIP 353
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 437 TEKKKCFVIXILFKXMTILKFSRYYNQTSKSSHELLKIKY 556
TE+++C I+ K+S Y N + + K++Y
Sbjct: 71 TERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQY 110
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 437 TEKKKCFVIXILFKXMTILKFSRYYNQTSKSSHELLKIKY 556
TE+++C I+ K+S Y N + + K++Y
Sbjct: 71 TERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQY 110
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 437 TEKKKCFVIXILFKXMTILKFSRYYNQTSKSSHELLKIKY 556
TE+++C I+ K+S Y N + + K++Y
Sbjct: 71 TERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQY 110
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 437 TEKKKCFVIXILFKXMTILKFSRYYNQTSKSSHELLKIKY 556
TE+++C I+ K+S Y N + + K++Y
Sbjct: 71 TERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQY 110
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 437 TEKKKCFVIXILFKXMTILKFSRYYNQTSKSSHELLKIKY 556
TE+++C I+ K+S Y N + + K++Y
Sbjct: 71 TERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQY 110
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 437 TEKKKCFVIXILFKXMTILKFSRYYNQTSKSSHELLKIKY 556
TE+++C I+ K+S Y N + + K++Y
Sbjct: 71 TERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQY 110
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 437 TEKKKCFVIXILFKXMTILKFSRYYNQTSKSSHELLKIKY 556
TE+++C I+ K+S Y N + + K++Y
Sbjct: 71 TERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQY 110
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 542 LKIKYRHSNNRLTKKLLYLNSVGLTDRIP 628
L K H+NN KKL Y N + ++IP
Sbjct: 85 LSNKTIHNNNNNYKKLQYYN-INYIEQIP 112
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 542 LKIKYRHSNNRLTKKLLYLNSVGLTDRIP 628
L K H+NN KKL Y N + ++IP
Sbjct: 85 LSNKTIHNNNNNYKKLQYYN-INYIEQIP 112
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 542 LKIKYRHSNNRLTKKLLYLNSVGLTDRIP 628
L K H+NN KKL Y N + ++IP
Sbjct: 85 LSNKTIHNNNNNYKKLQYYN-INYIEQIP 112
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 542 LKIKYRHSNNRLTKKLLYLNSVGLTDRIP 628
L K H+NN KKL Y N + ++IP
Sbjct: 85 LSNKTIHNNNNNYKKLQYYN-INYIEQIP 112
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 542 LKIKYRHSNNRLTKKLLYLNSVGLTDRIP 628
L K H+NN KKL Y N + ++IP
Sbjct: 318 LSNKTIHNNNNNYKKLQYYN-INYIEQIP 345
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 554 YRHSNNRLTKKLLYLNSVGLTDRIP 628
Y++ NN K LY N + + ++IP
Sbjct: 311 YKNYNNNYNSKKLYYNIINI-EQIP 334
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 554 YRHSNNRLTKKLLYLNSVGLTDRIP 628
Y++ NN K LY N + + ++IP
Sbjct: 322 YKNYNNNYNSKKLYYNIINI-EQIP 345
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,929
Number of Sequences: 438
Number of extensions: 2657
Number of successful extensions: 25
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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