Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1371
(436 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38852-1|AAL31361.1| 102|Homo sapiens signal peptidase 12kDa su... 61 1e-09
BC000884-1|AAH00884.1| 104|Homo sapiens signal peptidase comple... 58 1e-08
U74667-1|AAB18236.1| 513|Homo sapiens tat interactive protein p... 30 3.0
U67734-1|AAD00163.1| 461|Homo sapiens cPLA2 interacting protein... 30 3.0
U40989-1|AAB02683.1| 482|Homo sapiens tat interactive protein p... 30 3.0
BC117167-1|AAI17168.1| 513|Homo sapiens HIV-1 Tat interacting p... 30 3.0
BC093032-1|AAH93032.1| 461|Homo sapiens HIV-1 Tat interacting p... 30 3.0
BC064912-1|AAH64912.1| 513|Homo sapiens HIV-1 Tat interacting p... 30 3.0
BC000166-1|AAH00166.3| 457|Homo sapiens HTATIP protein protein. 30 3.0
AY214165-1|AAO21130.1| 513|Homo sapiens HIV-1 Tat interactive p... 30 3.0
AB209813-1|BAD93050.1| 448|Homo sapiens HIV-1 Tat interactive p... 30 3.0
EF542797-1|ABQ18300.1| 1494|Homo sapiens methyl-CpG binding doma... 29 6.9
BC150264-1|AAI50265.1| 1494|Homo sapiens methyl-CpG binding doma... 29 6.9
BC014534-1|AAH14534.1| 229|Homo sapiens MBD5 protein protein. 29 6.9
AK001975-1|BAA92013.1| 229|Homo sapiens protein ( Homo sapiens ... 29 6.9
AC016731-1|AAY14912.1| 229|Homo sapiens unknown protein. 29 6.9
AB040894-1|BAA95985.1| 1498|Homo sapiens KIAA1461 protein protein. 29 6.9
BC016742-1|AAH16742.1| 199|Homo sapiens DnaJ (Hsp40) homolog, s... 29 9.1
AF368276-1|AAK60571.1| 199|Homo sapiens beta cysteine string pr... 29 9.1
>L38852-1|AAL31361.1| 102|Homo sapiens signal peptidase 12kDa
subunit protein.
Length = 102
Score = 61.3 bits (142), Expect = 1e-09
Identities = 24/66 (36%), Positives = 40/66 (60%)
Frame = +2
Query: 56 MDFFTSIPTHIDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVYXXXXXXXXXXX 235
++ +S+PT +DY GQ AE++++ I +IVGF++GY+ +QF +VY
Sbjct: 2 LEHLSSLPTQMDYKGQKLAEQMFQGIYLFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCL 61
Query: 236 XTVPPW 253
T+PPW
Sbjct: 62 LTLPPW 67
>BC000884-1|AAH00884.1| 104|Homo sapiens signal peptidase complex
subunit 1 homolog (S. cerevisiae) protein.
Length = 104
Score = 58.0 bits (134), Expect = 1e-08
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +2
Query: 56 MDFFTSIPTHIDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVY--XXXXXXXXX 229
++ +S+PT +DY GQ AE++++ II +IVGF++GY+ +QF +VY
Sbjct: 2 LEHLSSLPTQMDYKGQKLAEQMFQGIILFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCL 61
Query: 230 XXXTVPPW 253
T+PPW
Sbjct: 62 AQLTLPPW 69
>U74667-1|AAB18236.1| 513|Homo sapiens tat interactive protein
protein.
Length = 513
Score = 30.3 bits (65), Expect = 3.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 163 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILK 5
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K
Sbjct: 246 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRK 296
>U67734-1|AAD00163.1| 461|Homo sapiens cPLA2 interacting protein
protein.
Length = 461
Score = 30.3 bits (65), Expect = 3.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 163 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILK 5
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K
Sbjct: 194 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRK 244
>U40989-1|AAB02683.1| 482|Homo sapiens tat interactive protein
protein.
Length = 482
Score = 30.3 bits (65), Expect = 3.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 163 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILK 5
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K
Sbjct: 215 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRK 265
>BC117167-1|AAI17168.1| 513|Homo sapiens HIV-1 Tat interacting
protein, 60kDa protein.
Length = 513
Score = 30.3 bits (65), Expect = 3.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 163 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILK 5
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K
Sbjct: 246 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRK 296
>BC093032-1|AAH93032.1| 461|Homo sapiens HIV-1 Tat interacting
protein, 60kDa protein.
Length = 461
Score = 30.3 bits (65), Expect = 3.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 163 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILK 5
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K
Sbjct: 194 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRK 244
>BC064912-1|AAH64912.1| 513|Homo sapiens HIV-1 Tat interacting
protein, 60kDa protein.
Length = 513
Score = 30.3 bits (65), Expect = 3.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 163 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILK 5
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K
Sbjct: 246 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRK 296
>BC000166-1|AAH00166.3| 457|Homo sapiens HTATIP protein protein.
Length = 457
Score = 30.3 bits (65), Expect = 3.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 163 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILK 5
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K
Sbjct: 190 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRK 240
>AY214165-1|AAO21130.1| 513|Homo sapiens HIV-1 Tat interactive
protein, 60kDa protein.
Length = 513
Score = 30.3 bits (65), Expect = 3.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 163 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILK 5
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K
Sbjct: 246 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRK 296
>AB209813-1|BAD93050.1| 448|Homo sapiens HIV-1 Tat interactive
protein, 60kDa isoform 3 variant protein.
Length = 448
Score = 30.3 bits (65), Expect = 3.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 163 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILK 5
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K
Sbjct: 181 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRK 231
>EF542797-1|ABQ18300.1| 1494|Homo sapiens methyl-CpG binding domain
protein 5 protein.
Length = 1494
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 300 TVLRNLPVQRIASVHCHGGTVRMAASRNPAP 208
+VL+N+P+ R +VHCH S +P P
Sbjct: 747 SVLQNIPL-RGEAVHCHNANTNFVHSNSPVP 776
>BC150264-1|AAI50265.1| 1494|Homo sapiens methyl-CpG binding domain
protein 5 protein.
Length = 1494
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 300 TVLRNLPVQRIASVHCHGGTVRMAASRNPAP 208
+VL+N+P+ R +VHCH S +P P
Sbjct: 747 SVLQNIPL-RGEAVHCHNANTNFVHSNSPVP 776
>BC014534-1|AAH14534.1| 229|Homo sapiens MBD5 protein protein.
Length = 229
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 300 TVLRNLPVQRIASVHCHGGTVRMAASRNPAP 208
+VL+N+P+ R +VHCH S +P P
Sbjct: 125 SVLQNIPL-RGEAVHCHNANTNFVHSNSPVP 154
>AK001975-1|BAA92013.1| 229|Homo sapiens protein ( Homo sapiens
cDNA FLJ11113 fis, clone PLACE1005936. ).
Length = 229
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 300 TVLRNLPVQRIASVHCHGGTVRMAASRNPAP 208
+VL+N+P+ R +VHCH S +P P
Sbjct: 125 SVLQNIPL-RGEAVHCHNANTNFVHSNSPVP 154
>AC016731-1|AAY14912.1| 229|Homo sapiens unknown protein.
Length = 229
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 300 TVLRNLPVQRIASVHCHGGTVRMAASRNPAP 208
+VL+N+P+ R +VHCH S +P P
Sbjct: 125 SVLQNIPL-RGEAVHCHNANTNFVHSNSPVP 154
>AB040894-1|BAA95985.1| 1498|Homo sapiens KIAA1461 protein protein.
Length = 1498
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 300 TVLRNLPVQRIASVHCHGGTVRMAASRNPAP 208
+VL+N+P+ R +VHCH S +P P
Sbjct: 751 SVLQNIPL-RGEAVHCHNANTNFVHSNSPVP 780
>BC016742-1|AAH16742.1| 199|Homo sapiens DnaJ (Hsp40) homolog,
subfamily C, member 5 beta protein.
Length = 199
Score = 28.7 bits (61), Expect = 9.1
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +1
Query: 130 NNYIVQYSWFCMGLYSSAILAVSVYSWCRISACCHSYC 243
N Y + SW+ L+ L Y C + CC+ C
Sbjct: 100 NTYFMLSSWWAKALFVIVGLLTGCYFCCCLCCCCNCCC 137
>AF368276-1|AAK60571.1| 199|Homo sapiens beta cysteine string
protein protein.
Length = 199
Score = 28.7 bits (61), Expect = 9.1
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +1
Query: 130 NNYIVQYSWFCMGLYSSAILAVSVYSWCRISACCHSYC 243
N Y + SW+ L+ L Y C + CC+ C
Sbjct: 100 NTYFMLSSWWAKALFVIVGLLTGCYFCCCLCCCCNCCC 137
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,419,029
Number of Sequences: 237096
Number of extensions: 983998
Number of successful extensions: 2481
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2480
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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