Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1367
         (783 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70686-9|CAA94614.3|  915|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AL021446-1|CAA16265.1|  398|Caenorhabditis elegans Hypothetical ...    28   6.6  
AF036692-6|AAB88328.1|  397|Caenorhabditis elegans Hypothetical ...    28   6.6  

>Z70686-9|CAA94614.3|  915|Caenorhabditis elegans Hypothetical
           protein R10H10.7 protein.
          Length = 915

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +3

Query: 432 YAIALPRQSPSATRVFFFLIYIYYPKKNRP 521
           Y  A+PR SP AT+V  FL+ I+   K+ P
Sbjct: 115 YMDAIPRDSPGATKVLNFLLKIFDVLKSSP 144


>AL021446-1|CAA16265.1|  398|Caenorhabditis elegans Hypothetical
           protein F14F4.1 protein.
          Length = 398

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 309 KGTVNVLLLLMFTNIAWSYFIVVLILNYYC 398
           K TV +  ++MF  +AW    ++  + YYC
Sbjct: 181 KNTVKITYVIMFNTLAWLLPSILAAVFYYC 210


>AF036692-6|AAB88328.1|  397|Caenorhabditis elegans Hypothetical
           protein C44B12.5 protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 158 LRLLCSSRSTHSHVALV*CL*ISARRDVALPHD 256
           +R+ CS  +TH   +   C   +ARRD +LP+D
Sbjct: 174 VRVKCSEVATHDEDSCNFCCQQTARRDTSLPND 206


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,496,035
Number of Sequences: 27780
Number of extensions: 297194
Number of successful extensions: 647
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)