Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1366
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...   130   1e-32
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...   129   2e-32

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score =  130 bits (314), Expect = 1e-32
 Identities = 65/124 (52%), Positives = 83/124 (66%), Gaps = 2/124 (1%)
 Frame = -3

Query: 622 TIPFEQTFRDLSAQGNDPRRND-LTTFNYCGLRLAPAHAVPKGTEAGMPFQLFVMLSNYD 446
           TIPFE+TFR+L A  N P   D L+ FN+CG        +PKGTEAG P  LFVM+SNY 
Sbjct: 550 TIPFERTFRNLDA--NRPTGGDALSEFNFCGCGWPQHMLLPKGTEAGYPCHLFVMISNYA 607

Query: 445 LDRIDQDDGKQLTCVEASSFCGLKDKKYPDRRAMGFPFDR-PSSSATSLQDFILPNMGLQ 269
            DR++QD     TC +  +FCG+KDK YPDRR+MG+PFDR P     +LQ F+ PNM +Q
Sbjct: 608 DDRVEQDTSG--TCSDGDTFCGIKDKLYPDRRSMGYPFDRMPRDGVDTLQQFLTPNMRVQ 665

Query: 268 DITI 257
           ++ I
Sbjct: 666 EVVI 669


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score =  129 bits (312), Expect = 2e-32
 Identities = 65/124 (52%), Positives = 84/124 (67%), Gaps = 2/124 (1%)
 Frame = -3

Query: 622 TIPFEQTFRDLSAQGNDPRRND-LTTFNYCGLRLAPAHAVPKGTEAGMPFQLFVMLSNYD 446
           TIPFE+TFR+L    N P+  + L  FN+CG        +PKGT  GM  QLFVM+SNYD
Sbjct: 551 TIPFERTFRNLDL--NRPQGGEELAQFNFCGCGWPQHMLIPKGTPEGMKSQLFVMISNYD 608

Query: 445 LDRIDQDDGKQLTCVEASSFCGLKDKKYPDRRAMGFPFDR-PSSSATSLQDFILPNMGLQ 269
            D+IDQ    +  C +A S+CG+KDK YPDRR+MG+PFDR P +   +LQ F+ PNM +Q
Sbjct: 609 DDKIDQ--STEGVCNDAGSYCGIKDKLYPDRRSMGYPFDRMPRNGVDTLQQFLTPNMRVQ 666

Query: 268 DITI 257
           D+TI
Sbjct: 667 DVTI 670


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,416
Number of Sequences: 336
Number of extensions: 3969
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)