Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1365
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40934-4|AAA81682.1| 873|Caenorhabditis elegans Vacuolar h atpa... 40 0.003
AB055110-1|BAB62291.1| 873|Caenorhabditis elegans VHA-5 protein. 40 0.003
Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical pr... 39 0.005
AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuo... 39 0.005
AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuo... 39 0.005
AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuro... 39 0.005
Z99169-1|CAB16306.2| 966|Caenorhabditis elegans Hypothetical pr... 35 0.058
AB055112-1|BAB62293.1| 966|Caenorhabditis elegans VHA-7 protein. 35 0.058
Z50872-8|CAA90758.1| 865|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL031269-3|CAA20334.1| 865|Caenorhabditis elegans Hypothetical ... 31 1.2
AB055111-1|BAB62292.1| 865|Caenorhabditis elegans VHA-6 protein. 31 1.2
Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuo... 30 2.2
AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuo... 30 2.2
AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuo... 30 2.2
Z92785-3|CAB07202.1| 326|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z82260-1|CAB05140.1| 332|Caenorhabditis elegans Hypothetical pr... 28 8.8
AY941160-1|AAY18633.1| 83|Caenorhabditis elegans FMRFamide-rel... 28 8.8
AL031627-13|CAA20964.1| 304|Caenorhabditis elegans Hypothetical... 28 8.8
>U40934-4|AAA81682.1| 873|Caenorhabditis elegans Vacuolar h atpase
protein 5 protein.
Length = 873
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = -3
Query: 249 QSDIQRVFVFIALLCIPVMLLGKPLYLLATKKNNPK 142
QS I+ + V IA++C+PVML GKP++ + +K K
Sbjct: 668 QSVIEMILVVIAVICVPVMLFGKPIHHVMQQKKKAK 703
>AB055110-1|BAB62291.1| 873|Caenorhabditis elegans VHA-5 protein.
Length = 873
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = -3
Query: 249 QSDIQRVFVFIALLCIPVMLLGKPLYLLATKKNNPK 142
QS I+ + V IA++C+PVML GKP++ + +K K
Sbjct: 668 QSVIEMILVVIAVICVPVMLFGKPIHHVMQQKKKAK 703
>Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical
protein ZK637.8e protein.
Length = 888
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = -3
Query: 249 QSDIQRVFVFIALLCIPVMLLGKPLYLLATKK 154
QS + +FV +A+ C+PVML GKP +L +K
Sbjct: 682 QSFFETIFVLVAIACVPVMLFGKPYFLWKEEK 713
>Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical
protein ZK637.8d protein.
Length = 899
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = -3
Query: 249 QSDIQRVFVFIALLCIPVMLLGKPLYLLATKK 154
QS + +FV +A+ C+PVML GKP +L +K
Sbjct: 693 QSFFETIFVLVAIACVPVMLFGKPYFLWKEEK 724
>Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical
protein ZK637.8b protein.
Length = 883
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = -3
Query: 249 QSDIQRVFVFIALLCIPVMLLGKPLYLLATKK 154
QS + +FV +A+ C+PVML GKP +L +K
Sbjct: 677 QSFFETIFVLVAIACVPVMLFGKPYFLWKEEK 708
>AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuolar
proton pump 101kDa subunit variant protein.
Length = 888
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = -3
Query: 249 QSDIQRVFVFIALLCIPVMLLGKPLYLLATKK 154
QS + +FV +A+ C+PVML GKP +L +K
Sbjct: 682 QSFFETIFVLVAIACVPVMLFGKPYFLWKEEK 713
>AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuolar
proton pump 103kDa subunit variant protein.
Length = 899
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = -3
Query: 249 QSDIQRVFVFIALLCIPVMLLGKPLYLLATKK 154
QS + +FV +A+ C+PVML GKP +L +K
Sbjct: 693 QSFFETIFVLVAIACVPVMLFGKPYFLWKEEK 724
>AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuronal
vacuolar protonpump 100 kDa subunit variant protein.
Length = 883
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = -3
Query: 249 QSDIQRVFVFIALLCIPVMLLGKPLYLLATKK 154
QS + +FV +A+ C+PVML GKP +L +K
Sbjct: 677 QSFFETIFVLVAIACVPVMLFGKPYFLWKEEK 708
>Z99169-1|CAB16306.2| 966|Caenorhabditis elegans Hypothetical
protein C26H9A.1 protein.
Length = 966
Score = 35.1 bits (77), Expect = 0.058
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -3
Query: 240 IQRVFVFIALLCIPVMLLGKPLYLLATKKNNPKVQ 136
++ + + I+L CIP+ML GKPL++ K+Q
Sbjct: 730 VETILISISLACIPIMLFGKPLWVRFVTSKRHKLQ 764
>AB055112-1|BAB62293.1| 966|Caenorhabditis elegans VHA-7 protein.
Length = 966
Score = 35.1 bits (77), Expect = 0.058
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -3
Query: 240 IQRVFVFIALLCIPVMLLGKPLYLLATKKNNPKVQ 136
++ + + I+L CIP+ML GKPL++ K+Q
Sbjct: 730 VETILISISLACIPIMLFGKPLWVRFVTSKRHKLQ 764
>Z50872-8|CAA90758.1| 865|Caenorhabditis elegans Hypothetical
protein VW02B12L.1 protein.
Length = 865
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -3
Query: 249 QSDIQRVFVFIALLCIPVMLLGKPLYL 169
QS ++ + + IA++ +PVMLL KP Y+
Sbjct: 688 QSLVELILLLIAVVSVPVMLLVKPFYI 714
>AL031269-3|CAA20334.1| 865|Caenorhabditis elegans Hypothetical
protein VW02B12L.1 protein.
Length = 865
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -3
Query: 249 QSDIQRVFVFIALLCIPVMLLGKPLYL 169
QS ++ + + IA++ +PVMLL KP Y+
Sbjct: 688 QSLVELILLLIAVVSVPVMLLVKPFYI 714
>AB055111-1|BAB62292.1| 865|Caenorhabditis elegans VHA-6 protein.
Length = 865
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -3
Query: 249 QSDIQRVFVFIALLCIPVMLLGKPLYL 169
QS ++ + + IA++ +PVMLL KP Y+
Sbjct: 688 QSLVELILLLIAVVSVPVMLLVKPFYI 714
>Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical
protein ZK637.8f protein.
Length = 889
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 249 QSDIQRVFVFIALLCIPVMLLGKPLYLLATKKNNPK 142
Q+ I+ + V +AL+ +P+ML KP +L K +
Sbjct: 677 QATIEIILVVLALVQVPIMLFAKPYFLYRRDKQQSR 712
>Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical
protein ZK637.8c protein.
Length = 894
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 249 QSDIQRVFVFIALLCIPVMLLGKPLYLLATKKNNPK 142
Q+ I+ + V +AL+ +P+ML KP +L K +
Sbjct: 682 QATIEIILVVLALVQVPIMLFAKPYFLYRRDKQQSR 717
>Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical
protein ZK637.8a protein.
Length = 905
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 249 QSDIQRVFVFIALLCIPVMLLGKPLYLLATKKNNPK 142
Q+ I+ + V +AL+ +P+ML KP +L K +
Sbjct: 693 QATIEIILVVLALVQVPIMLFAKPYFLYRRDKQQSR 728
>AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuolar
proton pump 101kDa subunit variant protein.
Length = 889
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 249 QSDIQRVFVFIALLCIPVMLLGKPLYLLATKKNNPK 142
Q+ I+ + V +AL+ +P+ML KP +L K +
Sbjct: 677 QATIEIILVVLALVQVPIMLFAKPYFLYRRDKQQSR 712
>AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuolar
proton pump 102kDa subunit variant protein.
Length = 894
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 249 QSDIQRVFVFIALLCIPVMLLGKPLYLLATKKNNPK 142
Q+ I+ + V +AL+ +P+ML KP +L K +
Sbjct: 682 QATIEIILVVLALVQVPIMLFAKPYFLYRRDKQQSR 717
>AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuolar
proton pump 103kDa subunit variant protein.
Length = 905
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 249 QSDIQRVFVFIALLCIPVMLLGKPLYLLATKKNNPK 142
Q+ I+ + V +AL+ +P+ML KP +L K +
Sbjct: 693 QATIEIILVVLALVQVPIMLFAKPYFLYRRDKQQSR 728
>Z92785-3|CAB07202.1| 326|Caenorhabditis elegans Hypothetical
protein F31E9.5 protein.
Length = 326
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -3
Query: 234 RVFVFIALLCIPVMLLGKPLYLLATKKNNPKVQVQLTIPVT 112
R+F+ ++ + + L PLY+ K N P+ + L P T
Sbjct: 21 RLFLLFLVVFLLLNCLISPLYVFVNKTNRPRDKTMLLYPTT 61
>Z82260-1|CAB05140.1| 332|Caenorhabditis elegans Hypothetical
protein C32H11.2 protein.
Length = 332
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -3
Query: 246 SDIQRVFVFIALLCIPVMLLGKPLYLLATKKNNPKVQVQLTIPV 115
S + R +FI L C+ ++ P Y+ K N PK + L P+
Sbjct: 19 SGLTRPTIFILLGCMSIVF---PFYVYVYKTNRPKEEKALLFPI 59
>AY941160-1|AAY18633.1| 83|Caenorhabditis elegans
FMRFamide-related peptide 23 precursorprotein.
Length = 83
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 367 KVEIGLFSFIVIYRHPRLRGY*FRDGIKINLY*YINQQGFLRMFR 501
K+ I L+ +V+ +RG FR G + + QQ FLR R
Sbjct: 5 KISILLYILVVLQETAAVRGALFRSGRAVPFERVVGQQDFLRFGR 49
>AL031627-13|CAA20964.1| 304|Caenorhabditis elegans Hypothetical
protein Y102A5C.23 protein.
Length = 304
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = -3
Query: 231 VFVFIALLCIPVMLLGKPLYLLATKKNNPKVQVQLTIPVT 112
++ F+ + CI + + P Y+ A K N+ + + L P+T
Sbjct: 25 LYAFLFIACIIIYTIVLPFYICANKVNHERDKEILIYPIT 64
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,715,204
Number of Sequences: 27780
Number of extensions: 320749
Number of successful extensions: 749
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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