Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1364
         (735 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    31   0.049
EF519477-2|ABP73564.1|  177|Anopheles gambiae CTL4 protein.            23   9.8  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 30.7 bits (66), Expect = 0.049
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 544 FLIYCFIAGFCFFLSEIMFFYETIFSFI 461
           FLIYCF++  C   S +  F   IF F+
Sbjct: 33  FLIYCFVSPSCLECSSVPLFINFIFMFL 60


>EF519477-2|ABP73564.1|  177|Anopheles gambiae CTL4 protein.
          Length = 177

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 717 WSXGLLDVNND*VLRCIYILG 655
           W+ G+   NN  V  C+YI G
Sbjct: 136 WADGVAPANNRVVPFCVYIQG 156


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,192
Number of Sequences: 2352
Number of extensions: 9888
Number of successful extensions: 50
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)