Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1364
         (735 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC132671-1|AAI32672.1|  802|Homo sapiens threonyl-tRNA synthetas...    30   9.9  
BC074887-1|AAH74887.1|  441|Homo sapiens TARSL2 protein protein.       30   9.9  
BC069811-1|AAH69811.1|  466|Homo sapiens TARSL2 protein protein.       30   9.9  
BC069346-1|AAH69346.1|  466|Homo sapiens TARSL2 protein protein.       30   9.9  
AK057734-1|BAB71554.1|  433|Homo sapiens protein ( Homo sapiens ...    30   9.9  
AK056653-1|BAB71241.1|  707|Homo sapiens protein ( Homo sapiens ...    30   9.9  

>BC132671-1|AAI32672.1|  802|Homo sapiens threonyl-tRNA
           synthetase-like 2 protein.
          Length = 802

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -3

Query: 556 EHQLFLIYCFIAGFCFFLSEIMFFYETIFSFI 461
           E +LF  +    G CFFL    F Y T+  FI
Sbjct: 408 EQELFFFHDLSPGSCFFLPRGAFIYNTLTDFI 439


>BC074887-1|AAH74887.1|  441|Homo sapiens TARSL2 protein protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -3

Query: 556 EHQLFLIYCFIAGFCFFLSEIMFFYETIFSFI 461
           E +LF  +    G CFFL    F Y T+  FI
Sbjct: 47  EQELFFFHDLSPGSCFFLPRGAFIYNTLTDFI 78


>BC069811-1|AAH69811.1|  466|Homo sapiens TARSL2 protein protein.
          Length = 466

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -3

Query: 556 EHQLFLIYCFIAGFCFFLSEIMFFYETIFSFI 461
           E +LF  +    G CFFL    F Y T+  FI
Sbjct: 72  EQELFFFHDLSPGSCFFLPRGAFIYNTLTDFI 103


>BC069346-1|AAH69346.1|  466|Homo sapiens TARSL2 protein protein.
          Length = 466

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -3

Query: 556 EHQLFLIYCFIAGFCFFLSEIMFFYETIFSFI 461
           E +LF  +    G CFFL    F Y T+  FI
Sbjct: 72  EQELFFFHDLSPGSCFFLPRGAFIYNTLTDFI 103


>AK057734-1|BAB71554.1|  433|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25005 fis, clone CBL00905. ).
          Length = 433

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -3

Query: 556 EHQLFLIYCFIAGFCFFLSEIMFFYETIFSFI 461
           E +LF  +    G CFFL    F Y T+  FI
Sbjct: 39  EQELFFFHDLSPGSCFFLPRGAFIYNTLTDFI 70


>AK056653-1|BAB71241.1|  707|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32091 fis, clone OCBBF2000824, moderately
           similar to THREONYL-TRNA SYNTHETASE, CYTOPLASMIC (EC
           6.1.1.3). ).
          Length = 707

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -3

Query: 556 EHQLFLIYCFIAGFCFFLSEIMFFYETIFSFI 461
           E +LF  +    G CFFL    F Y T+  FI
Sbjct: 313 EQELFFFHDLSPGSCFFLPRGAFIYNTLTDFI 344


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,006,461
Number of Sequences: 237096
Number of extensions: 1392130
Number of successful extensions: 2759
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2759
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)