Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1363
         (441 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q613E5 Cluster: Putative uncharacterized protein CBG164...    33   2.1  
UniRef50_UPI0000D56FB3 Cluster: PREDICTED: similar to protein ph...    32   6.3  
UniRef50_A4C639 Cluster: Calcineurin phosphohydrolase superfamil...    32   6.3  
UniRef50_Q9ULL4 Cluster: Plexin-B3 precursor; n=12; Theria|Rep: ...    32   6.3  
UniRef50_Q7VQQ6 Cluster: Bifunctional protein hldE [Includes: D-...    31   8.3  

>UniRef50_Q613E5 Cluster: Putative uncharacterized protein CBG16428;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG16428 - Caenorhabditis
           briggsae
          Length = 99

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +2

Query: 278 DCSRTELIKIVESHGGQVVANYDESCWCCVSGRCTSGGACVRAGAAXWTCCA 433
           DC+ T+    + SHG     +Y+ + + C  G C   G   R G     CC+
Sbjct: 17  DCNGTDFCVKLPSHGHVGRKHYEGAQYSCDFGTCQKEGCAKREGGGTLCCCS 68


>UniRef50_UPI0000D56FB3 Cluster: PREDICTED: similar to protein
           phosphatase 1G (formerly 2C), magnesium-dependent, gamma
           isoform; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to protein phosphatase 1G (formerly 2C),
           magnesium-dependent, gamma isoform - Tribolium castaneum
          Length = 561

 Score = 31.9 bits (69), Expect = 6.3
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +2

Query: 257 CILSYEEDCSRTELIKIVESHGGQVVANY 343
           CIL+Y+ED   T    + + HGGQ VA Y
Sbjct: 42  CILNYDED---TSFFAVYDGHGGQEVAQY 67


>UniRef50_A4C639 Cluster: Calcineurin phosphohydrolase superfamily
           protein; n=1; Pseudoalteromonas tunicata D2|Rep:
           Calcineurin phosphohydrolase superfamily protein -
           Pseudoalteromonas tunicata D2
          Length = 262

 Score = 31.9 bits (69), Expect = 6.3
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 153 PRKRXKKVLQXAEQFRTGIQDKVEVISNALAGRRYAFCH 269
           P      V + A  F  GI+ K +VI  +L+G+R+  CH
Sbjct: 82  PGNHDASVRRYANHFFAGIEIKQQVIFQSLSGKRFLVCH 120


>UniRef50_Q9ULL4 Cluster: Plexin-B3 precursor; n=12; Theria|Rep:
           Plexin-B3 precursor - Homo sapiens (Human)
          Length = 1909

 Score = 31.9 bits (69), Expect = 6.3
 Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +2

Query: 344 DESC-WCCVSGRCTSGGACVRAG 409
           D  C WC + GRCT  G C RAG
Sbjct: 488 DPLCGWCVLQGRCTRKGQCGRAG 510


>UniRef50_Q7VQQ6 Cluster: Bifunctional protein hldE [Includes:
           D-beta-D-heptose 7-phosphate kinase (EC 2.7.1.-)
           (D-beta-D-heptose 7-phosphotransferase); D-beta-D-
           heptose 1-phosphate adenosyltransferase (EC 2.7.7.-)];
           n=14; Gammaproteobacteria|Rep: Bifunctional protein hldE
           [Includes: D-beta-D-heptose 7-phosphate kinase (EC
           2.7.1.-) (D-beta-D-heptose 7-phosphotransferase);
           D-beta-D- heptose 1-phosphate adenosyltransferase (EC
           2.7.7.-)] - Blochmannia floridanus
          Length = 479

 Score = 31.5 bits (68), Expect = 8.3
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +2

Query: 200 NWNTR*SGSDIERSGRTEICILSYEEDCSRTELIKIVE 313
           N N    G ++ R G  ++C+L ++EDCS + +I  +E
Sbjct: 438 NVNNIVGGKEVLRQGG-QVCVLKFQEDCSSSSIIDTME 474


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,408,259
Number of Sequences: 1657284
Number of extensions: 5808818
Number of successful extensions: 16775
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16765
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22340008747
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)