Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1363
         (441 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF149019-1|AAG01376.1| 1909|Homo sapiens plexin-B3 protein.            32   1.0  
AB033032-1|BAA86520.1| 1912|Homo sapiens KIAA1206 protein protein.     32   1.0  
BX649592-4|CAO03498.1| 1838|Homo sapiens plexin B2 protein.            29   5.4  
AB002313-1|BAA21571.1| 1841|Homo sapiens KIAA0315 protein.             29   5.4  
BX679664-5|CAH71325.1|  891|Homo sapiens WD repeat domain 47 pro...    29   7.1  
BX679664-4|CAH71327.1|  919|Homo sapiens WD repeat domain 47 pro...    29   7.1  
BX679664-3|CAH71326.1|  920|Homo sapiens WD repeat domain 47 pro...    29   7.1  
BC039254-1|AAH39254.1|  893|Homo sapiens WDR47 protein protein.        29   7.1  
BC034964-1|AAH34964.1|  920|Homo sapiens WD repeat domain 47 pro...    29   7.1  
AL449266-4|CAI14352.1|  891|Homo sapiens WD repeat domain 47 pro...    29   7.1  
AL449266-3|CAI14353.1|  919|Homo sapiens WD repeat domain 47 pro...    29   7.1  
AL449266-2|CAI14351.1|  920|Homo sapiens WD repeat domain 47 pro...    29   7.1  
AB020700-1|BAA74916.2|  974|Homo sapiens KIAA0893 protein protein.     29   7.1  

>AF149019-1|AAG01376.1| 1909|Homo sapiens plexin-B3 protein.
          Length = 1909

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +2

Query: 344 DESC-WCCVSGRCTSGGACVRAG 409
           D  C WC + GRCT  G C RAG
Sbjct: 488 DPLCGWCVLQGRCTRKGQCGRAG 510


>AB033032-1|BAA86520.1| 1912|Homo sapiens KIAA1206 protein protein.
          Length = 1912

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +2

Query: 344 DESC-WCCVSGRCTSGGACVRAG 409
           D  C WC + GRCT  G C RAG
Sbjct: 491 DPLCGWCVLQGRCTRKGQCGRAG 513


>BX649592-4|CAO03498.1| 1838|Homo sapiens plexin B2 protein.
          Length = 1838

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = +2

Query: 344 DESC-WCCVSGRCTSGGACVRA-GAAXW 421
           D  C WC V GRCT    C RA  A+ W
Sbjct: 483 DPYCGWCVVEGRCTRKAECPRAEEASHW 510


>AB002313-1|BAA21571.1| 1841|Homo sapiens KIAA0315 protein.
          Length = 1841

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = +2

Query: 344 DESC-WCCVSGRCTSGGACVRA-GAAXW 421
           D  C WC V GRCT    C RA  A+ W
Sbjct: 486 DPYCGWCVVEGRCTRKAECPRAEEASHW 513


>BX679664-5|CAH71325.1|  891|Homo sapiens WD repeat domain 47
           protein.
          Length = 891

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 269 YEEDCSRTELIKIVESHGGQVVANYDESCWCCVSG 373
           Y  DC R + +  +  H G ++A Y  S W   SG
Sbjct: 710 YTTDCQRGQGLHALSGHTGHILALYTWSGWMIASG 744


>BX679664-4|CAH71327.1|  919|Homo sapiens WD repeat domain 47
           protein.
          Length = 919

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 269 YEEDCSRTELIKIVESHGGQVVANYDESCWCCVSG 373
           Y  DC R + +  +  H G ++A Y  S W   SG
Sbjct: 738 YTTDCQRGQGLHALSGHTGHILALYTWSGWMIASG 772


>BX679664-3|CAH71326.1|  920|Homo sapiens WD repeat domain 47
           protein.
          Length = 920

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 269 YEEDCSRTELIKIVESHGGQVVANYDESCWCCVSG 373
           Y  DC R + +  +  H G ++A Y  S W   SG
Sbjct: 739 YTTDCQRGQGLHALSGHTGHILALYTWSGWMIASG 773


>BC039254-1|AAH39254.1|  893|Homo sapiens WDR47 protein protein.
          Length = 893

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 269 YEEDCSRTELIKIVESHGGQVVANYDESCWCCVSG 373
           Y  DC R + +  +  H G ++A Y  S W   SG
Sbjct: 712 YTTDCQRGQGLHALSGHTGHILALYTWSGWMIASG 746


>BC034964-1|AAH34964.1|  920|Homo sapiens WD repeat domain 47
           protein.
          Length = 920

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 269 YEEDCSRTELIKIVESHGGQVVANYDESCWCCVSG 373
           Y  DC R + +  +  H G ++A Y  S W   SG
Sbjct: 739 YTTDCQRGQGLHALSGHTGHILALYTWSGWMIASG 773


>AL449266-4|CAI14352.1|  891|Homo sapiens WD repeat domain 47
           protein.
          Length = 891

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 269 YEEDCSRTELIKIVESHGGQVVANYDESCWCCVSG 373
           Y  DC R + +  +  H G ++A Y  S W   SG
Sbjct: 710 YTTDCQRGQGLHALSGHTGHILALYTWSGWMIASG 744


>AL449266-3|CAI14353.1|  919|Homo sapiens WD repeat domain 47
           protein.
          Length = 919

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 269 YEEDCSRTELIKIVESHGGQVVANYDESCWCCVSG 373
           Y  DC R + +  +  H G ++A Y  S W   SG
Sbjct: 738 YTTDCQRGQGLHALSGHTGHILALYTWSGWMIASG 772


>AL449266-2|CAI14351.1|  920|Homo sapiens WD repeat domain 47
           protein.
          Length = 920

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 269 YEEDCSRTELIKIVESHGGQVVANYDESCWCCVSG 373
           Y  DC R + +  +  H G ++A Y  S W   SG
Sbjct: 739 YTTDCQRGQGLHALSGHTGHILALYTWSGWMIASG 773


>AB020700-1|BAA74916.2|  974|Homo sapiens KIAA0893 protein protein.
          Length = 974

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 269 YEEDCSRTELIKIVESHGGQVVANYDESCWCCVSG 373
           Y  DC R + +  +  H G ++A Y  S W   SG
Sbjct: 793 YTTDCQRGQGLHALSGHTGHILALYTWSGWMIASG 827


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,363,339
Number of Sequences: 237096
Number of extensions: 853239
Number of successful extensions: 2555
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2555
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)