Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1362
         (707 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.           139   9e-35
AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    25   1.8  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   2.3  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    25   2.3  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    23   9.4  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score =  139 bits (336), Expect = 9e-35
 Identities = 66/84 (78%), Positives = 76/84 (90%)
 Frame = +2

Query: 2   RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
           RGAQ+AIVVYDI N D+F RAK WVKELQRQASP+IVIALAGNK+DLA  R+V++EEA+ 
Sbjct: 95  RGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANSRVVDYEEAKQ 154

Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
           YAD+N LLFMETSAKTA+NVNDIF
Sbjct: 155 YADDNRLLFMETSAKTAVNVNDIF 178


>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -2

Query: 190 VCVGLRLLELDHALGCEVALVARQSDHYRRRSLPLEFL 77
           VC+GLR   +   +G    L       Y + S+P++F+
Sbjct: 442 VCIGLRFGMMQARIGLAYLLQGFSFAPYEKTSIPMKFI 479


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 618 APCTVIGVMFXHEERLKLFFWLKWSC 695
           AP  V+G+ F HE   K F  +   C
Sbjct: 912 APAAVVGLQFLHESLFKHFINITSKC 937


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 16/58 (27%), Positives = 24/58 (41%)
 Frame = +3

Query: 465 TKTFRSRFAIRYSNVSSYAAKKFIETTGYTACDVIRSHRNR*AHIAKTQKLAPCTVIG 638
           T T      + Y  + S      IE+ GYT  DV+   R+      +  +L   T+IG
Sbjct: 137 TTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWRSTPIRGVEEAELPQFTIIG 194


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 697 KQDHFNQKNNFNRSSCXNI 641
           ++D F ++  F +S C NI
Sbjct: 121 QRDEFREQEKFTKSECVNI 139


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,973
Number of Sequences: 2352
Number of extensions: 10149
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)