Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1362
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 143 1e-34
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 97 1e-20
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 90 1e-18
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 89 3e-18
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 86 3e-17
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 81 8e-16
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 79 4e-15
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 77 2e-14
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 77 2e-14
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 76 3e-14
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 74 1e-13
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 74 1e-13
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 72 5e-13
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 72 5e-13
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 72 5e-13
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 72 5e-13
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 72 5e-13
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 70 1e-12
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 69 2e-12
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 69 2e-12
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 68 6e-12
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 68 8e-12
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 67 1e-11
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 64 7e-11
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 64 7e-11
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 60 1e-09
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 60 1e-09
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 60 2e-09
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 56 3e-08
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 55 4e-08
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 55 4e-08
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 55 6e-08
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 54 8e-08
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 53 2e-07
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 53 2e-07
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 49 4e-06
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 48 5e-06
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 47 2e-05
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 46 2e-05
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 46 3e-05
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 46 4e-05
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 45 6e-05
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 45 6e-05
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 43 2e-04
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 42 4e-04
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 42 4e-04
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 42 4e-04
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 42 4e-04
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 41 0.001
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 40 0.002
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 39 0.004
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 35 0.050
U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical pr... 31 0.81
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 30 1.9
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 30 1.9
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 29 4.3
Z29116-3|CAA82372.1| 485|Caenorhabditis elegans Hypothetical pr... 28 7.5
U20902-1|AAA84393.1| 485|Caenorhabditis elegans cyclin A protein. 28 7.5
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 143 bits (347), Expect = 1e-34
Identities = 67/84 (79%), Positives = 79/84 (94%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
RGAQ+AIVVYDITNQ++F +AKNWVKELQRQASP+IV+ALAGNK+D+A KR VE+EEA A
Sbjct: 90 RGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKRTVEYEEANA 149
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
YA++N LLFMETSAKT+MNVNDIF
Sbjct: 150 YAEDNALLFMETSAKTSMNVNDIF 173
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 97.1 bits (231), Expect = 1e-20
Identities = 44/84 (52%), Positives = 64/84 (76%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
RGA A++VYDIT +DTF +W+++ ++ ++ ++VI L GNKSDL A+R V+ EE +A
Sbjct: 77 RGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLEARREVKREEGEA 136
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
+A E+GL+FMETSAKTA NV + F
Sbjct: 137 FAREHGLVFMETSAKTAANVEEAF 160
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 90.2 bits (214), Expect = 1e-18
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
RGA IVVYDIT+Q+TF K W++E+ R A ++ L GNK DL AKR VE + AQ
Sbjct: 82 RGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDLTAKRAVETQAAQD 141
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
YA + G+ F+ETSAK++ NV F
Sbjct: 142 YAGQLGIPFLETSAKSSTNVEQAF 165
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 89.0 bits (211), Expect = 3e-18
Identities = 40/84 (47%), Positives = 57/84 (67%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
RGA A++VYDIT + T+ +W+ + + +P+ I L GNK+DL +R V +EEA+A
Sbjct: 82 RGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKADLEDQRDVPYEEAKA 141
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
+A+ENGL F+E SAKT NV D F
Sbjct: 142 FAEENGLTFLECSAKTGSNVEDAF 165
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 85.8 bits (203), Expect = 3e-17
Identities = 43/84 (51%), Positives = 57/84 (67%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
R A A++VYDIT++++F ++W+ +LQR P IVI L GNKSDL A R V EE +A
Sbjct: 77 RHAIGALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIGNKSDLEADREVRKEEGEA 136
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
+A E GL+FME SAKT V + F
Sbjct: 137 FAREFGLIFMEISAKTNEYVEEAF 160
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 81.0 bits (191), Expect = 8e-16
Identities = 40/84 (47%), Positives = 54/84 (64%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
R A A++VYDIT + +F + W+ +L++ P +VI L GNKSDL A R V EE +A
Sbjct: 77 RNALGALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIMLIGNKSDLKAVRDVTTEEGEA 136
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
+A +NGL FMETSAK +V F
Sbjct: 137 FAKKNGLTFMETSAKANKHVEKAF 160
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 78.6 bits (185), Expect = 4e-15
Identities = 40/84 (47%), Positives = 52/84 (61%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
RGA A++VYDI T+ + W+KEL+ A +IVI L GNKSDL R V +EA+
Sbjct: 82 RGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVPTDEAKI 141
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
YA+ N L F+ETSA + NV F
Sbjct: 142 YAERNQLSFIETSALDSTNVEAAF 165
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
R + A+VVYDITN ++F + WV +++ + ++I L GNK+DLA KR V E+ +
Sbjct: 82 RDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDLADKRQVSTEDGEK 141
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
A + ++F+ETSAK NV +F
Sbjct: 142 KARDLNVMFIETSAKAGYNVKQLF 165
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 76.6 bits (180), Expect = 2e-14
Identities = 33/84 (39%), Positives = 53/84 (63%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
R + A+VVYDITN ++F + W+ +++ + ++I L GNK+DL+ KR V +E +
Sbjct: 81 RDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVTTDEGER 140
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
A E ++F+ETSAK NV +F
Sbjct: 141 KAKELNVMFIETSAKAGYNVKQLF 164
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 75.8 bits (178), Expect = 3e-14
Identities = 33/84 (39%), Positives = 55/84 (65%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
RG+ ++V+DIT++ +F + KNWV E++ + I + GNK DL +R V ++A+A
Sbjct: 83 RGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKIDLEEERQVTRQDAEA 142
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
YA+ G L+METSA+ + ++D F
Sbjct: 143 YAESEGALYMETSAQDNVGISDAF 166
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/84 (38%), Positives = 51/84 (60%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
RGA I+VYDITN+ +F KNW++ ++ A+ + + GNK D+ +R V + +
Sbjct: 79 RGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGEQ 138
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
A E G F+ETSAK +N+++ F
Sbjct: 139 LAIEYGTKFLETSAKANLNIDEAF 162
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/84 (38%), Positives = 51/84 (60%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
RGA I+VYDITN+ +F KNW++ ++ A+ + + GNK D+ +R V + +
Sbjct: 79 RGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGEQ 138
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
A E G F+ETSAK +N+++ F
Sbjct: 139 LAIEYGTKFLETSAKANLNIDEAF 162
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 71.7 bits (168), Expect = 5e-13
Identities = 31/84 (36%), Positives = 53/84 (63%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
RGA I++YDITN+++F ++W +++ + + + L GNK D+ ++R+V + +
Sbjct: 93 RGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQ 152
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
AD+ GL F ETSAK +NV +F
Sbjct: 153 LADQLGLEFFETSAKENINVKAVF 176
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 71.7 bits (168), Expect = 5e-13
Identities = 31/84 (36%), Positives = 53/84 (63%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
RGA I++YDITN+++F ++W +++ + + + L GNK D+ ++R+V + +
Sbjct: 93 RGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQ 152
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
AD+ GL F ETSAK +NV +F
Sbjct: 153 LADQLGLEFFETSAKENINVKAVF 176
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 71.7 bits (168), Expect = 5e-13
Identities = 31/84 (36%), Positives = 53/84 (63%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
RGA I++YDITN+++F ++W +++ + + + L GNK D+ ++R+V + +
Sbjct: 93 RGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQ 152
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
AD+ GL F ETSAK +NV +F
Sbjct: 153 LADQLGLEFFETSAKENINVKAVF 176
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 71.7 bits (168), Expect = 5e-13
Identities = 31/84 (36%), Positives = 53/84 (63%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
RGA I++YDITN+++F ++W +++ + + + L GNK D+ ++R+V + +
Sbjct: 107 RGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQ 166
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
AD+ GL F ETSAK +NV +F
Sbjct: 167 LADQLGLEFFETSAKENINVKAVF 190
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 71.7 bits (168), Expect = 5e-13
Identities = 31/84 (36%), Positives = 53/84 (63%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
RGA I++YDITN+++F ++W +++ + + + L GNK D+ ++R+V + +
Sbjct: 93 RGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQ 152
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
AD+ GL F ETSAK +NV +F
Sbjct: 153 LADQLGLEFFETSAKENINVKAVF 176
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 70.1 bits (164), Expect = 1e-12
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
RGA A++VYDI+ T+ + W+K L+ A+ IVI L GNKSDL+ V +EA+
Sbjct: 79 RGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLS--HAVPTDEAKI 136
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
YA+ N + F+ETSA NV F
Sbjct: 137 YAERNHISFIETSALDNTNVEAAF 160
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
RGA ++VYDITN +F W++ + AS +V + GNK D++ +R+V E +
Sbjct: 80 RGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDRRVVSRERGEK 139
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
A ++G+ F ETSAK ++V+ F
Sbjct: 140 IAQDHGISFHETSAKLNVHVDTAF 163
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 69.3 bits (162), Expect = 2e-12
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 AQSAIVVYDITNQDTFGRA-KNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQAY 184
A + VYD+TN+ +F K W+KE+++ A P+ V+ L GNK+D+ +R V+F+ A+
Sbjct: 79 AHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKADMDQERKVDFDRAEKL 138
Query: 185 ADENGLLFMETSAKTAMNVNDIF 253
A G+ E SAKT +N + F
Sbjct: 139 ASRLGVSLYEVSAKTGINCEEAF 161
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 68.1 bits (159), Expect = 6e-12
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQA---SPS-IVIALAGNKSDLAAKRMVEFE 169
R + + +YD TN+++F +NWVKE SPS V L G KSD+ ++R V +E
Sbjct: 89 RNSVGVLAIYDTTNRESFEHVENWVKEAALNLGGPSPSKCVFQLVGTKSDMDSQRQVNYE 148
Query: 170 EAQAYADENGLLFMETSAKTAMNVNDIF 253
E + +A + + F+ETS++T NVN+ F
Sbjct: 149 EGEYFAKYHKMKFIETSSRTGDNVNEAF 176
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 67.7 bits (158), Expect = 8e-12
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
R A ++ YDIT + +FG + W+ ++ + A+P++V L G K DL +R +E EEA+
Sbjct: 81 RSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTKCDLEDQRAIEAEEAEM 140
Query: 182 YADENGLLFM-ETSAKTAMNVNDIF 253
NG+ M ETSAK +NV++ F
Sbjct: 141 LQRANGMFAMLETSAKGNVNVDNAF 165
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/84 (38%), Positives = 48/84 (57%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
RG +VVYD+TN ++FG K W++E++ S+ L GNK + +R+V +A+
Sbjct: 81 RGTHGVVVVYDVTNGESFGNVKRWLQEIENNCD-SVQKVLVGNKCEENERRVVLESDARN 139
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
YA + F ETSAK NV +F
Sbjct: 140 YAQSMNISFFETSAKEDKNVEPMF 163
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 64.5 bits (150), Expect = 7e-11
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
R A + ++VYDI N+ +F +NW+ +++ ++ + L GNK DL R V +E +
Sbjct: 74 RDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDL--PRAVPTDEGKR 131
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
A+ + FMETSAKT NV+ F
Sbjct: 132 LAEAYQIPFMETSAKTGFNVDRAF 155
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 64.5 bits (150), Expect = 7e-11
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
R A + ++VYDI N+ +F +NW+ +++ ++ + L GNK DL R V +E +
Sbjct: 74 RDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDL--PRAVPTDEGKR 131
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
A+ + FMETSAKT NV+ F
Sbjct: 132 LAEAYQIPFMETSAKTGFNVDRAF 155
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQA---SPSIVIALAGNKSDLAAKRMVEFEE 172
R A I+++DITN+ +F ++W+ +L+ A P I+I GNK+DL +R V
Sbjct: 87 RDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIIC--GNKADLENRRQVSTAR 144
Query: 173 AQAYADENGLLFMETSAKTAMNV 241
A+ AD+ GL + ETSA T+ NV
Sbjct: 145 AKQLADQLGLPYFETSACTSTNV 167
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQA---SPSIVIALAGNKSDLAAKRMVEFEE 172
R A I+++DITN+ +F ++W+ +L+ A P I+I GNK+DL +R V
Sbjct: 87 RDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIIC--GNKADLENRRQVSTAR 144
Query: 173 AQAYADENGLLFMETSAKTAMNV 241
A+ AD+ GL + ETSA T+ NV
Sbjct: 145 AKQLADQLGLPYFETSACTSTNV 167
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 60.1 bits (139), Expect = 2e-09
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQR-QASPSIVIALAGNKSDLAAKRMVEFEEAQ 178
+ Q +VVY IT+Q TF +N +++ R + S ++ I L GNK DL+ +R V EE
Sbjct: 73 KNGQGFVVVYSITSQQTFHDIRNMKEQIVRVKGSENVPILLVGNKCDLSHQRQVRSEEGL 132
Query: 179 AYADENGLLFMETSAKTAMNVNDIF 253
A A+ F E SAK NVN F
Sbjct: 133 ALAESWSCPFTECSAKNNQNVNVTF 157
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQA---SPSIVIALAGNKSDLAAKRMVEFEE 172
R + + VYD+T +++F W+KE ++ + L GNK D+ V +E
Sbjct: 172 RNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNKCDVECTNRVSTDE 231
Query: 173 AQAYADENGLLFMETSAKTAMNVNDI 250
AQ +AD N + ETSAK A + +
Sbjct: 232 AQMFADRNNMALFETSAKLASEADHV 257
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 55.6 bits (128), Expect = 3e-08
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQ-ASPSIVIALAGNKSDLAAKRMVEFEEAQ 178
RGAQ I VYD+T++ +F + +W++E+ + +I+ + NK D+ R+V EE
Sbjct: 82 RGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDM-PNRVVTREEGL 140
Query: 179 AYADENGLLFMETSAKTAMNVNDIF 253
+A + LF+E SAKT V F
Sbjct: 141 KFAKRHRTLFIEASAKTKEGVQCTF 165
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 55.2 bits (127), Expect = 4e-08
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASP----SIVIALAGNKSDLAAKRMVEFE 169
RGA ++ +D+TN +F +W E QASP L GNK DL ++R V +
Sbjct: 80 RGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNKVDLESQRAVSSK 139
Query: 170 EAQAYADENG-LLFMETSAKTAMNVNDIF 253
AQ++ G + + E SAK A+NV F
Sbjct: 140 RAQSWCQTKGNIPYYEVSAKEALNVEAAF 168
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSD--LAAKRMVEFEEA 175
R A AI+VYD+ + +F R ++W++ ++ SI I L GNK D ++ V +
Sbjct: 532 RRADGAILVYDVCAEQSFLRVRDWIETIKESTERSIPIILVGNKVDMRISTPGSVAKTDG 591
Query: 176 QAYADENGLLFMETSAKTAMNVND 247
+ A G+LFMETSA N+++
Sbjct: 592 ASMAAAMGVLFMETSALDGSNIDN 615
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQA-SPSIVIALAGNKSDLAAKRMVEFEEAQ 178
R A +A++VYD+T+++TF + W+K+L R + + + L GNK+DL KR V E +
Sbjct: 127 RNADAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDANVYLIGNKTDLVEKREVTEAEGK 186
Query: 179 AYADENGLLFMETS 220
A A + F E S
Sbjct: 187 AMAAKINAKFFELS 200
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 54.8 bits (126), Expect = 6e-08
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQR-QASPSIVIALAGNKSDLAAKRMVEFEEAQ 178
+ Q ++VY IT Q TF + ++ R + + + + L GNK DL +R+V ++ Q
Sbjct: 73 KNGQGFVLVYSITAQSTFNDLMDLRDQILRVKDTDEVPMILVGNKCDLEDERVVGKDQGQ 132
Query: 179 AYADENGLLFMETSAKTAMNVNDIF 253
A + G F+ETSAK +NV+++F
Sbjct: 133 NLARQFGSAFLETSAKAKINVSEVF 157
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 54.4 bits (125), Expect = 8e-08
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
R AQ ++V+ + TF K ++ + + L GNKSDLA R V+ EA
Sbjct: 73 RTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGKEVPMILVGNKSDLAETRQVDESEAHN 132
Query: 182 YADENGLLFMETSAKTAMNVNDIF 253
+A++ + + ETSA+ NV+++F
Sbjct: 133 FAEKLKIPYFETSARLNQNVSEVF 156
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = +2
Query: 5 GAQSAIVVYDITNQDTFGRAKNW---VKELQRQASPSIVIALAGNKSDLAAKRMVEFEEA 175
GA +VYD+TN +F A +W VK+ + + + + L GNK+DL +R+V E
Sbjct: 108 GANIVFLVYDVTNSKSFENAVDWLSVVKKNTKSSETPVKLVLMGNKTDLEERRVVSVEAH 167
Query: 176 QAYADENGLLFMETSAKTAMNV 241
+ +A N ++ SAKT V
Sbjct: 168 KNFATSNDMMPTYVSAKTGDTV 189
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQA 181
R A + ++VYD++ Q +F W+ E++ A+ ++ L GNK D +R V +
Sbjct: 78 RSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVGNKVDKGDEREVPERIGRD 137
Query: 182 YADENGL-LFMETSAKTAMNVNDIF 253
++D N F+ETSA A NV+ +F
Sbjct: 138 FSDVNQFDYFLETSALDATNVDQLF 162
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAK---RMVEFEE 172
R A ++++D+T++ +F +NW+ ++ + V+ L GNK DL R +
Sbjct: 274 RKADGVVLMFDVTSEQSFLNVRNWIDSVRAGVDDATVMCLVGNKMDLFGSDIARSAVYRA 333
Query: 173 AQAYADENGLLFMETSAKTAMNVN 244
A+ A E + F ETSA T ++
Sbjct: 334 AEKLAVEFKIPFFETSAYTGFGID 357
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 48.4 bits (110), Expect = 5e-06
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQR--QASPSIVIALAGNKSDLAAKRMVEFEEA 175
R + I V+ I + ++F + +++ R + S+ I L GNK D+ +R+V E
Sbjct: 87 RSGEGFICVFSILDMESFEATNEFREQILRVKNSDSSVPIVLVGNKGDMRDQRVVSAELC 146
Query: 176 QAYADENGLLFMETSAKTAMNVNDIF 253
+ A++ G ++ETSAK NV+ +F
Sbjct: 147 RQRAEQWGCHYVETSAKRRENVDKVF 172
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 48.0 bits (109), Expect = 7e-06
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 IVVYDITNQDTFGRAKNWVKELQRQ-ASPSIVIALAGNKSDLAAKRMVEFEEAQAYADEN 196
I+VY I ++ +F N +++ R SI I + GNK+DL+ +R+V EE + A +
Sbjct: 89 ILVYAIDDRKSFEMCSNIYEKIVRTYGDTSIPIVIVGNKTDLSTQRVVRAEEGEELARQW 148
Query: 197 GLLFMETSAKTAMNVNDIFPL 259
F+E +A+ + V+++F L
Sbjct: 149 DAKFVEITARESNRVHEVFEL 169
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +2
Query: 20 IVVYDITNQDTFGRAK---NWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQAYAD 190
I++Y +TN+ +F +KE++ A I L GNK D +KR V Q A
Sbjct: 13 ILIYSVTNKQSFAELVPIIEMMKEVKGNAIAETPIMLVGNKKDEESKREVSSNSGQKVAT 72
Query: 191 ENGLLFMETSAKTAMNVNDIF 253
F+ETSAK N+ ++F
Sbjct: 73 NMECGFIETSAKNNENITELF 93
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNK 133
RGA I+VYDITN+ +F KNW++ ++ A+ + + GNK
Sbjct: 79 RGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNK 122
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSD 139
RGA A++VYDI T+ + W+KEL+ A +IVI GNK D
Sbjct: 82 RGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPVGNKCD 127
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 45.6 bits (103), Expect = 4e-05
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 17/101 (16%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQ-ASPSIVIALAGNKSDLAAK--------- 151
RGAQ I VYD+T++ +F + +W++E+ + +I+ + NK D+ K
Sbjct: 55 RGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDMVRKSRFCSIFGL 114
Query: 152 -------RMVEFEEAQAYADENGLLFMETSAKTAMNVNDIF 253
R+V EE +A + LF+E SAKT V F
Sbjct: 115 KNNFQPNRVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTF 155
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 44.8 bits (101), Expect = 6e-05
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQR-QASPSIVIALAGNKSDLAAKRMVEFEEAQ 178
R + ++V+ + +F N+ ++++R + S + + L GNK DL++ R V+F
Sbjct: 73 RTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDLSS-RSVDFRTVS 131
Query: 179 AYADENGLLFMETSAKTAMNVNDIF 253
A G+ ++TSAKT M V++ F
Sbjct: 132 ETAKGYGIPNVDTSAKTRMGVDEAF 156
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 44.8 bits (101), Expect = 6e-05
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQR-QASPSIVIALAGNKSDLAAKRMVEFEEAQ 178
R + ++V+ + +F N+ ++++R + S + + L GNK DL++ R V+F
Sbjct: 76 RTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDLSS-RSVDFRTVS 134
Query: 179 AYADENGLLFMETSAKTAMNVNDIF 253
A G+ ++TSAKT M V++ F
Sbjct: 135 ETAKGYGIPNVDTSAKTRMGVDEAF 159
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +2
Query: 20 IVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQAYADENG 199
I++Y + ++ +F A K L+ + I L G+K D+ KR+V E Q A G
Sbjct: 293 IIMYSVVDRQSFYHAAEIFKRLEHSREHNQPIVLVGSKKDMRVKRVVTSFEGQQLARTLG 352
Query: 200 LLFMETSAK 226
+ F+E S+K
Sbjct: 353 IPFLEVSSK 361
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNK 133
RGA ++VYDITN +F W++ + AS +V + GNK
Sbjct: 80 RGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNK 123
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQR-QASPSIVIALAGNKSDLAAKRMVEFEEAQ 178
R ++V+ +T++++F K + + R + I L GNK+DL +R V EA+
Sbjct: 87 RTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVARHEAE 146
Query: 179 AYADENGLLFMETSAKTAMNVNDIF 253
A + ++E SAK NV++ F
Sbjct: 147 ELAHRLSIPYLECSAKIRKNVDEAF 171
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQR-QASPSIVIALAGNKSDLAAKRMVEFEEAQ 178
R ++V+ +T++++F K + + R + I L GNK+DL +R V EA+
Sbjct: 87 RTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVARHEAE 146
Query: 179 AYADENGLLFMETSAKTAMNVNDIF 253
A + ++E SAK NV++ F
Sbjct: 147 ELAHRLSIPYLECSAKIRKNVDEAF 171
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQR-QASPSIVIALAGNKSDLAAKRMVEFEEAQ 178
R ++V+ +T++++F K + + R + I L GNK+DL +R V EA+
Sbjct: 87 RTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVARHEAE 146
Query: 179 AYADENGLLFMETSAKTAMNVNDIF 253
A + ++E SAK NV++ F
Sbjct: 147 ELAHRLSIPYLECSAKIRKNVDEAF 171
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +2
Query: 23 VVYDITNQDTFGRAKNWVKEL-QRQASPSIVIALAGNKSDLAAKRMVEFEEAQAYADENG 199
+VY++ N+++F A + + L R+ + I L GNK DL +V E A +
Sbjct: 249 IVYNVDNRESFVCATDLLSRLLNRKIARGANIILIGNKIDLKRNTVVSKMEGACLAKVHK 308
Query: 200 LLFMETSAKTAMNVNDIFPL 259
F+E SA+ +MN+++++ +
Sbjct: 309 CNFVEVSAQYSMNISELWTI 328
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/81 (32%), Positives = 43/81 (53%)
Frame = +2
Query: 11 QSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQAYAD 190
Q AI+++D+T + T+ NW ++L R +I I L GNK D+ R V+ + +
Sbjct: 83 QCAIIMFDVTARVTYKNVPNWHRDLAR-VCENIPIVLCGNKVDV-KDRKVKAKTITFHRK 140
Query: 191 ENGLLFMETSAKTAMNVNDIF 253
+N L + + SAK+ N F
Sbjct: 141 KN-LQYYDISAKSNYNFEKPF 160
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/81 (32%), Positives = 42/81 (51%)
Frame = +2
Query: 11 QSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQAYAD 190
Q AI+++D+T + T+ NW +L R +I I L GNK D+ R V+ + +
Sbjct: 17 QCAIIMFDVTARVTYKNVPNWHHDLAR-VCENIPIVLCGNKVDV-KDRKVKAKTITFHRK 74
Query: 191 ENGLLFMETSAKTAMNVNDIF 253
+N L + + SAK+ N F
Sbjct: 75 KN-LQYYDISAKSNYNFEKPF 94
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 35.1 bits (77), Expect = 0.050
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 20 IVVYDITNQDTFGRAKNWVKELQRQASPSIV----IALAGNKSDLAAKRMVEFEEAQAYA 187
+VVYD+T+Q +F A+ ++ + R L GNK+DL R V E + A
Sbjct: 83 VVVYDVTSQLSFQYAEGILERISRHEHVLCPREHRTLLVGNKTDLERYRQVSETEGERLA 142
Query: 188 DENGLLFMETSA 223
++ F E SA
Sbjct: 143 SQHKAQFAECSA 154
>U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical
protein F20D6.8 protein.
Length = 370
Score = 31.1 bits (67), Expect = 0.81
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +2
Query: 20 IVVYDITNQDTFGRAKNWVKE--LQRQASP-SIVIALAGNKSDLAAKRMVEFEEAQAYAD 190
IV+Y++ N+ +F A ++ L +P + + L GNK DL +++ E ++ A
Sbjct: 248 IVMYNMDNRQSFIYATQILERITLANLNNPVPLQLFLIGNKCDLKRNQVISTNEGKSVAR 307
Query: 191 ENGLLFMETSAKTAMNVND 247
F+E SA MN +
Sbjct: 308 TFKCDFLEVSALLGMNTEE 326
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQR-QASPSIVIALAGNKSDLAAKRMVEFE 169
R ++V+ +T++++F K + + R + I L GNK+DL +R V FE
Sbjct: 87 RTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVSFE 143
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = +2
Query: 20 IVVYDITNQDTFGRAKN-WVKELQRQASPSIVIALAGNKSDLA----AKRMVEFEEAQAY 184
+V + + ++ T ++ W+ E+++ A ++ I L G K+DL ++ V + A+
Sbjct: 80 LVCFSMIDRKTLESCRSTWIPEIRKYAGDNVPIMLVGTKNDLVDDADSRNTVTEDYAKRV 139
Query: 185 ADENGL-LFMETSAKTAMNVNDIF 253
A E G F SA T + +F
Sbjct: 140 AHEIGCHKFYSCSALTHKGLKRVF 163
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 2 RGAQSAIVVYDITNQDTFGRAKNWVKELQRQ---ASPSIVIALAGNK 133
R + + VYD+T +++F W+KE ++ + L GNK
Sbjct: 19 RNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNK 65
>Z29116-3|CAA82372.1| 485|Caenorhabditis elegans Hypothetical
protein ZK507.6 protein.
Length = 485
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 614 LLCFSDMCSSVSMAPNDVTRSVASSFDKF 528
+LC D C VS+A + T SV ++F F
Sbjct: 145 VLCDDDDCDKVSVASSTFTTSVRATFSSF 173
>U20902-1|AAA84393.1| 485|Caenorhabditis elegans cyclin A protein.
Length = 485
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 614 LLCFSDMCSSVSMAPNDVTRSVASSFDKF 528
+LC D C VS+A + T SV ++F F
Sbjct: 145 VLCDDDDCDKVSVASSTFTTSVRATFSSF 173
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,226,302
Number of Sequences: 27780
Number of extensions: 223416
Number of successful extensions: 697
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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