Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1361
(745 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40301| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 1e-19
SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0) 65 7e-11
SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_13109| Best HMM Match : Dynein_heavy (HMM E-Value=2.6e-09) 52 4e-07
SB_14565| Best HMM Match : YGGT (HMM E-Value=0.11) 48 1e-05
SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_14248| Best HMM Match : AAA_5 (HMM E-Value=7.7e-14) 45 7e-05
SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_35968| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47) 36 0.046
SB_11809| Best HMM Match : Rabaptin (HMM E-Value=0.8) 35 0.080
SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_35384| Best HMM Match : PRA1 (HMM E-Value=6.7) 33 0.24
SB_55554| Best HMM Match : AAA (HMM E-Value=0.022) 31 0.99
SB_46345| Best HMM Match : AAA_5 (HMM E-Value=0.053) 29 4.0
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 29 4.0
SB_51593| Best HMM Match : p450 (HMM E-Value=7.8e-13) 29 5.3
SB_28287| Best HMM Match : DUF202 (HMM E-Value=1.8) 29 5.3
SB_54120| Best HMM Match : Chlam_PMP (HMM E-Value=1.7e-06) 28 9.2
SB_42914| Best HMM Match : Chlam_PMP (HMM E-Value=3.3e-10) 28 9.2
SB_24862| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_40301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2653
Score = 93.9 bits (223), Expect = 1e-19
Identities = 53/147 (36%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
Frame = +3
Query: 288 PQGFNFFDMYMDTRQRKLKVWAEIIPEFIYDCNKPFFETLVPTIDTVRYGYLFEKLLGAG 467
P + + Y+D R+++ W +IIP F Y P+F+ LVPT+DTVR+G+L +KLL
Sbjct: 463 PGSGDLYSYYVDFDTRRMEPWEKIIPAFKYSSEVPYFDLLVPTVDTVRFGFLMDKLLSVN 522
Query: 468 KPVMFTGNTGVGKTV*RSRF*TECR*RDIMCRSY*ISRLKQXXXXXXXXXSYA*I--KGP 641
K V++TG TGVGK+V DI +S ++ + + I K
Sbjct: 523 KSVLYTGTTGVGKSVIAKAILD-----DISQKSNYMAIMMNFSAQTSSQRTQEMIETKLE 577
Query: 642 EKQSEL---PLGKKIIIFIDDVNMPKL 713
+K+ + P GK+++IF+DD+NMPKL
Sbjct: 578 KKRKNILGAPAGKRMVIFVDDLNMPKL 604
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/78 (39%), Positives = 46/78 (58%)
Frame = +2
Query: 512 IAVEILNRMSLTGYYVPVILNFSAQTSSPRTQEVIELRLDKRPRKAIGASAW*EDNYIYR 691
IA IL+ +S Y+ +++NFSAQTSS RTQE+IE +L+K+ + +GA A
Sbjct: 538 IAKAILDDISQKSNYMAIMMNFSAQTSSQRTQEMIETKLEKKRKNILGAPAGKRMVIFVD 597
Query: 692 RCEHAQIKMYIGAQPTIE 745
++ Y G+QP IE
Sbjct: 598 DLNMPKLDTY-GSQPPIE 614
Score = 51.2 bits (117), Expect = 9e-07
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +1
Query: 19 GLDHVNYNCGVGIKQVDISKVSAQCFLLGALL--AEPGDRF-ADKAALKIYIAHCFIFCY 189
GL + C ++QVDISKV+ C L + A+ G F D L I F+F +
Sbjct: 371 GLKFASKKCTQAMQQVDISKVTTMCCLFDSFFFPAKGGPDFNLDPTKLHPLICTAFLFVF 430
Query: 190 VWCIGGNILEMNRQSFE 240
+W IGGN++E +SF+
Sbjct: 431 LWSIGGNLVETCNESFD 447
>SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0)
Length = 2532
Score = 64.9 bits (151), Expect = 7e-11
Identities = 34/137 (24%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Frame = +3
Query: 306 FDMYMDTRQRKLKVWAEIIPEFIYDCNKPFFETLVPTIDTVRYGYLFEKLLGAGKPVMFT 485
++ Y D+++ W +++PE++++ + + E LVPT+DTVR +L + ++ +PV+
Sbjct: 471 YEYYFDSKKLLWVPWLDVVPEYVHNPDLKYNEILVPTVDTVRTTWLLQLMVNIHRPVLLV 530
Query: 486 GNTGVGKTV*RSRF*TEC-R*RDIMCRSY*ISRLKQXXXXXXXXXSYA*IKGPEKQSELP 662
G TG KT + + + ++ SR + K + P
Sbjct: 531 GETGTSKTATTANYLRGMDQDTTLLLNINFSSRTTSINVQHNLEANVE--KRTKDTYGPP 588
Query: 663 LGKKIIIFIDDVNMPKL 713
+GK++++F+DD+NMP++
Sbjct: 589 MGKRLLVFMDDMNMPQV 605
>SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3307
Score = 60.5 bits (140), Expect = 1e-09
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = +3
Query: 393 FFETLVPTIDTVRYGYLFEKLLGAGKPVMFTGNTGVGKTV*RSRF---*TECR*RDIMCR 563
F E ++PT+DTVRY YL E+L+ GKP +F G TG GK+V + F E + ++
Sbjct: 710 FNEIIIPTVDTVRYTYLMEQLVTHGKPSLFVGPTGTGKSVYITNFLLKKLEETYKPLLIN 769
Query: 564 SY*ISRLKQXXXXXXXXXSYA*IKGPEKQSELPLGKKIIIFIDDVNMP 707
+ KQ K + PLGKK ++F+DD+NMP
Sbjct: 770 FSAQTTAKQTQDIIMSKLD----KRRKGVYGPPLGKKTVVFVDDLNMP 813
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +2
Query: 554 YVPVILNFSAQTSSPRTQEVIELRLDKRPRKAIGASAW*EDNYIYRRCEHAQIKMYIGAQ 733
Y P+++NFSAQT++ +TQ++I +LDKR RK + + ++ + + GAQ
Sbjct: 763 YKPLLINFSAQTTAKQTQDIIMSKLDKR-RKGVYGPPLGKKTVVFVDDLNMPAREVYGAQ 821
Query: 734 PTIE 745
P IE
Sbjct: 822 PPIE 825
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 59.3 bits (137), Expect = 3e-09
Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Frame = +3
Query: 285 YPQGFNFFDMYMDTRQRKLKVWAEIIPE-FIYDCNKPFFETLVPTIDTVRYGYLFEKLLG 461
+P ++ ++D +Q+ W + + + Y+ + PF++ ++PT+DTVRY +L L+
Sbjct: 1693 FPAKDTVYEYHVDIKQKTWASWEDKLRSGWRYNPSVPFYKIMIPTVDTVRYDFLVYNLIQ 1752
Query: 462 AGKPVMFTGNTGVGKTV*RSRF*TECR*RDIMCRSY*ISRLKQXXXXXXXXXSYA*IKGP 641
A +PV+ TG G GKT + + + I+ Q + ++
Sbjct: 1753 AKRPVLLTGPVGTGKTSVAQKVLQKLDPKTYGLLV--INMSAQTSSNDVQEIIESKVEKR 1810
Query: 642 EKQSELPL-GKKIIIFIDDVNMP 707
K +P+ GK++I F+DD NMP
Sbjct: 1811 TKGVYVPIGGKQMITFMDDFNMP 1833
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/44 (36%), Positives = 30/44 (68%)
Frame = +2
Query: 512 IAVEILNRMSLTGYYVPVILNFSAQTSSPRTQEVIELRLDKRPR 643
+A ++L ++ Y + +++N SAQTSS QE+IE +++KR +
Sbjct: 1770 VAQKVLQKLDPKTYGL-LVINMSAQTSSNDVQEIIESKVEKRTK 1812
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/77 (19%), Positives = 36/77 (46%)
Frame = +1
Query: 22 LDHVNYNCGVGIKQVDISKVSAQCFLLGALLAEPGDRFADKAALKIYIAHCFIFCYVWCI 201
L+ ++C + +++ V + C L AL E A + + + F+FC +W +
Sbjct: 1611 LEFRKHHCKEPVPTSELNSVVSLCVLFDALATEENGVHAHEESYARMLELWFLFCLIWSV 1670
Query: 202 GGNILEMNRQSFEEVIK 252
++ E +R+ + ++
Sbjct: 1671 CASVDEDSRKKMDNFLR 1687
>SB_13109| Best HMM Match : Dynein_heavy (HMM E-Value=2.6e-09)
Length = 1703
Score = 52.4 bits (120), Expect = 4e-07
Identities = 31/105 (29%), Positives = 50/105 (47%)
Frame = +3
Query: 399 ETLVPTIDTVRYGYLFEKLLGAGKPVMFTGNTGVGKTV*RSRF*TECR*RDIMCRSY*IS 578
+ +VPT+DT RY YL + ++ KP++F G TG GK+ +D+ ++
Sbjct: 91 DIIVPTMDTARYSYLMDLMIHNNKPLLFVGPTGTGKSAYVKDKLMNGLPKDLYLPAFVNF 150
Query: 579 RLKQXXXXXXXXXSYA*IKGPEKQSELPLGKKIIIFIDDVNMPKL 713
+ K + P+GK+ +IF+DDVNMP L
Sbjct: 151 SAQTSANQTQDIIMSKLDKRRKGVFGPPVGKRFVIFVDDVNMPAL 195
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/64 (37%), Positives = 34/64 (53%)
Frame = +2
Query: 554 YVPVILNFSAQTSSPRTQEVIELRLDKRPRKAIGASAW*EDNYIYRRCEHAQIKMYIGAQ 733
Y+P +NFSAQTS+ +TQ++I +LDKR + G ++ Y GAQ
Sbjct: 143 YLPAFVNFSAQTSANQTQDIIMSKLDKRRKGVFGPPVGKRFVIFVDDVNMPALEKY-GAQ 201
Query: 734 PTIE 745
P IE
Sbjct: 202 PPIE 205
>SB_14565| Best HMM Match : YGGT (HMM E-Value=0.11)
Length = 357
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Frame = +3
Query: 348 WAEIIPEFIY--DCNKPFFETLVPTIDTVRYGYLFEKLLGAGKPVMFTGNTGVGKTV*RS 521
W + E++Y D F LVP +D V YL E + K + G G KTV
Sbjct: 203 WNTRVEEYVYPKDHVPDFLSILVPNVDNVCMDYLIETVSKQSKAALLIGEQGTAKTVMIK 262
Query: 522 RF*TECR*RDIMCRSY*ISRLKQXXXXXXXXXSYA*IKGPEKQSELPLGKKIIIFIDDVN 701
+ ++ + +S+ S S+ K P GKK+ +F+DD+N
Sbjct: 263 GYMSKYDPEKHLSKSFNFSSASTPLLFQRTIESFV-DKRMGSTYGPPAGKKMTVFVDDIN 321
Query: 702 MP 707
MP
Sbjct: 322 MP 323
>SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4994
Score = 46.0 bits (104), Expect = 3e-05
Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 2/122 (1%)
Frame = +3
Query: 348 WAEIIPEFIY--DCNKPFFETLVPTIDTVRYGYLFEKLLGAGKPVMFTGNTGVGKTV*RS 521
W + E++Y D + LVP +D VR +L + + K V+ G G KTV
Sbjct: 3018 WNNRVEEWVYPTDSKPDYASILVPNVDNVRTNFLVDTIAKQSKAVLLIGEQGTAKTVMIK 3077
Query: 522 RF*TECR*RDIMCRSY*ISRLKQXXXXXXXXXSYA*IKGPEKQSELPLGKKIIIFIDDVN 701
+ + M +S S SY K P G+K+ FIDD+N
Sbjct: 3078 GYMSTYNPELHMTKSSNFSSATTPLLFQRTIESYV-DKRVGTTYGPPAGRKMTAFIDDIN 3136
Query: 702 MP 707
MP
Sbjct: 3137 MP 3138
>SB_14248| Best HMM Match : AAA_5 (HMM E-Value=7.7e-14)
Length = 1083
Score = 44.8 bits (101), Expect = 7e-05
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Frame = +3
Query: 261 EEYEEAEYYPQGFNFFDMYMDTRQRKLKVWAEIIPEFIYDCNKPFFETLVPTIDTVRYGY 440
EE ++++ P G + + Q K W E I + + + + + +VPT+D VR +
Sbjct: 528 EESKKSDTVPIGSYVWLIVGSYYQIKWCNWMEGISQVNINQDMRYSDIIVPTLDLVRGSF 587
Query: 441 LFEKLLGAGKPVMFTGNTGVGKTV*RSRF*TECR*RDIMCRSY*ISRLKQXXXXXXXXXS 620
+ EKL+ K V+ G TG GKT+ S + + M ++ +S +
Sbjct: 588 ILEKLVTNHKKVLCVGPTGSGKTLAISD-----KLLNKMPHAF-LSHFINFSARTSANQT 641
Query: 621 YA*IKGP-EKQSE----LPLGKKIIIFIDDVNMPKL 713
I G +K+ + PLGK ++F+DD+NMP L
Sbjct: 642 QDIIDGKLDKRRKGVFGPPLGKYYVLFVDDLNMPAL 677
Score = 37.1 bits (82), Expect = 0.015
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +2
Query: 512 IAVEILNRMSLTGYYVPVILNFSAQTSSPRTQEVIELRLDKRPRKAIGASAW*EDNYIYR 691
I+ ++LN+M ++ +NFSA+TS+ +TQ++I+ +LDKR + G
Sbjct: 613 ISDKLLNKMPHA--FLSHFINFSARTSANQTQDIIDGKLDKRRKGVFGPPLGKYYVLFVD 670
Query: 692 RCEHAQIKMYIGAQPTIE 745
+++Y GAQP IE
Sbjct: 671 DLNMPALEVY-GAQPPIE 687
Score = 31.5 bits (68), Expect = 0.75
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 145 AALKIYIAHCFIFCYVWCIGGNILEMNRQSFEEVIKRNLKNTK 273
A ++ I FIF +W +GG R+ F E +++ +K K
Sbjct: 464 ALIEQLIEPWFIFSLIWSVGGTTDSDGRKKFSEFLRKKMKEEK 506
>SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4085
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +3
Query: 402 TLVPTIDTVRYGYLFEKLLGAGKPVMFTGNTGVGKT 509
+LVPT+DTVRY +L + PV+ TG +GVGK+
Sbjct: 1735 SLVPTVDTVRYAFLVALMAMNKHPVLLTGESGVGKS 1770
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/15 (66%), Positives = 15/15 (100%)
Frame = +3
Query: 666 GKKIIIFIDDVNMPK 710
GKK+I+F+DD+NMP+
Sbjct: 1862 GKKLILFVDDLNMPQ 1876
>SB_35968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 348 WAEIIPEFIY--DCNKPFFETLVPTIDTVRYGYLFEKLLGAGKPVMFTGNTGVGKTV 512
W + E++Y D + LVP +D VR +L + + K V+ G G KTV
Sbjct: 90 WNNRVEEWVYPTDSKPDYASILVPNVDNVRTNFLVDTIAKQSKAVLLIGEQGTAKTV 146
>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3367
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 345 VWAEIIPEFIYDCNKPFF-ETLVPTIDTVRYGYLFEKLLGAGKPVMFTGNTGVGKTV 512
+W +P+ + +K + +VPT+DTVR+ L L KP++ G G GKT+
Sbjct: 2490 LWQSKVPQIEVETHKVASPDVVVPTLDTVRHETLLYTWLAEHKPLVLCGPPGSGKTM 2546
>SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47)
Length = 1345
Score = 35.5 bits (78), Expect = 0.046
Identities = 22/71 (30%), Positives = 31/71 (43%)
Frame = +3
Query: 297 FNFFDMYMDTRQRKLKVWAEIIPEFIYDCNKPFFETLVPTIDTVRYGYLFEKLLGAGKPV 476
F F D+ M T L A + +D E V T+DTVR + +G+ +
Sbjct: 305 FAFDDVIMSTLLTYLVSRARVPDVSYFDAADLLGEVFVETVDTVRTRMFMDLASTSGRNI 364
Query: 477 MFTGNTGVGKT 509
+ TG G GKT
Sbjct: 365 LLTGPRGCGKT 375
>SB_11809| Best HMM Match : Rabaptin (HMM E-Value=0.8)
Length = 1009
Score = 34.7 bits (76), Expect = 0.080
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +2
Query: 554 YVPVILNFSAQTSSPRTQEVIELRLDKRPR 643
Y+PV +NFSA+TS+ +TQ++I +LD R
Sbjct: 160 YLPVNINFSARTSAGQTQDIIMGKLDSMSR 189
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 399 ETLVPTIDTVRYGYLFEKLLGAGKPVMFTGNTGVGKT 509
E + T DT R + E L P++F G TG GK+
Sbjct: 109 ELTIETDDTARQIFFLETFLTHEVPMLFVGPTGTGKS 145
Score = 29.5 bits (63), Expect = 3.0
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 660 PLGKKIIIFIDDVNMP 707
P GKK ++F+DD+NMP
Sbjct: 215 PPGKKCVMFVDDLNMP 230
>SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1918
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 306 FDMYMDTRQRKLKVWAEIIPEFIYDCNKPF-FETLVPTIDTVRYGYLFEKLLGAGKPVMF 482
++ Y++ + W +P + + E V TI R +L L AGKPV+
Sbjct: 832 WNYYVNPETHEFISWRGAVPPYAQTAAEGIPNEAYVHTIHNERISHLVGLLADAGKPVLL 891
Query: 483 TGNTGVGKT 509
G G GKT
Sbjct: 892 IGEEGGGKT 900
>SB_35384| Best HMM Match : PRA1 (HMM E-Value=6.7)
Length = 654
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 315 YMDTRQRKLKVWAEIIPEFIY--DCNKPFFETLVPTIDTVRYGYLFEKLLGAGKPVMFTG 488
Y+ Q + W+E + + Y D + LVP +D VR +L + K V+ G
Sbjct: 119 YVVNDQGDWQHWSERVEAYDYPTDSVPEYSGILVPNVDNVRTDFLINCIAKQEKAVLLIG 178
Query: 489 NTGVGKTV 512
G KTV
Sbjct: 179 EQGTAKTV 186
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 660 PLGKKIIIFIDDVNMP 707
P GKK+ FIDD+NMP
Sbjct: 320 PAGKKMTSFIDDINMP 335
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +1
Query: 97 LLGALLAEPGDRFADKAALKIYIAHCFIFCYVWCIGGNILEMNRQSFEEVIKRNLKNTKK 276
LL L+ PG+ A K A ++ FIF +W IG + +R+ EE + + K
Sbjct: 51 LLNGLI--PGED-APKQADASHLEKLFIFSIMWSIGALLELSDRKKLEEFMMETFPDLKW 107
Query: 277 PNIT 288
P ++
Sbjct: 108 PPVS 111
>SB_55554| Best HMM Match : AAA (HMM E-Value=0.022)
Length = 1681
Score = 31.1 bits (67), Expect = 0.99
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 402 TLVPTIDTVRYGYLFEKLLGAGKPVMFTGNTGVGKT 509
T+VP +D RY +L + ++ G PV+ G +G GK+
Sbjct: 903 TIVPELD--RYLHLLDLMIFDGYPVLLVGQSGTGKS 936
>SB_46345| Best HMM Match : AAA_5 (HMM E-Value=0.053)
Length = 636
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 160 YIAHCFIFCYVWCIGGNILEMNRQSFEEVIKRNLKNTKK 276
++ F+F W IGG++ +R+ F + IK + T K
Sbjct: 469 WLQSLFLFSLCWSIGGHLDRDSREKFSDFIKVLVAGTNK 507
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 390 PFFETLVPTIDTVRYGYLFEKLLGAGKPVMFTGNTGVGKT 509
P F +V T + R L + L G+PV+ G TG GKT
Sbjct: 1178 PGFGHVVWTHNMRRLAVLVWRALQFGEPVLLVGETGCGKT 1217
>SB_51593| Best HMM Match : p450 (HMM E-Value=7.8e-13)
Length = 358
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +2
Query: 572 NFSAQTSSPRTQEVIELRLDKRPRKAIGASAW*EDNYIYRRCEHAQIKMY 721
NF+ + P T+EV+ DK+ K++ A + E I+R+ H+ IK+Y
Sbjct: 89 NFAGRPLLPITEEVV----DKKRGKSLFAMDYGERWRIFRKLGHSTIKVY 134
>SB_28287| Best HMM Match : DUF202 (HMM E-Value=1.8)
Length = 206
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -3
Query: 374 YEFWNDLGPHF*FTLARVHVHVKEIETLRVIFGFFVFFKLR 252
Y FW L FTL+ H+ + + L ++FG + + R
Sbjct: 166 YAFWTKLDASSSFTLSHEHLDIYVMTFLALVFGIIMLLRRR 206
>SB_54120| Best HMM Match : Chlam_PMP (HMM E-Value=1.7e-06)
Length = 935
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 430 RTVSIVGTKVSKNGLLQSYMNSGM 359
R VS+VG ++S NGL+ ++SG+
Sbjct: 152 RNVSVVGNQLSNNGLIHVEVSSGI 175
>SB_42914| Best HMM Match : Chlam_PMP (HMM E-Value=3.3e-10)
Length = 1211
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 430 RTVSIVGTKVSKNGLLQSYMNSGM 359
R VS+VG ++S NGL+ ++SG+
Sbjct: 144 RNVSVVGNQLSNNGLIHVEVSSGI 167
>SB_24862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 660 PLGKKIIIFIDDVNMP 707
P KK+I FIDD+NMP
Sbjct: 35 PGNKKLIYFIDDMNMP 50
>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4700
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 67 DISKVSAQCFLLGALLAEPGDRFADKAALKIYIAHCFIFCYVWCIGGNILE 219
DI+ V+ C+LL LL P + D ++Y + F+F VW GG + +
Sbjct: 2702 DITMVTTLCYLLECLLT-PANTPPD-CNKELYELY-FVFAAVWAFGGAMFQ 2749
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,624,447
Number of Sequences: 59808
Number of extensions: 510230
Number of successful extensions: 1163
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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