Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1360
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   3.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.5  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   9.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   9.5  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 623 KSKQSCPSHRNVCPIRESNAR 685
           K +Q C  ++N CP++  N R
Sbjct: 483 KQRQQC--NQNKCPVKRGNGR 501


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 561 MYFSFCHVPNTGNH 520
           +Y  F H P  GNH
Sbjct: 692 IYRPFSHFPRCGNH 705


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/32 (25%), Positives = 19/32 (59%)
 Frame = -3

Query: 203 QLSIAVYMSILFYVLL*TLLVILKQINKYIGF 108
           Q+ +  +++  F+V++  LLV  + + K + F
Sbjct: 154 QMYVLFFVNFAFFVVVKMLLVRYRNLTKQLRF 185


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/32 (25%), Positives = 19/32 (59%)
 Frame = -3

Query: 203 QLSIAVYMSILFYVLL*TLLVILKQINKYIGF 108
           Q+ +  +++  F+V++  LLV  + + K + F
Sbjct: 154 QMYVLFFVNFAFFVVVKMLLVRYRNLTKQLRF 185


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +1

Query: 52  WKQLKKTYVSRDTLIIEPGNPMYL 123
           WK +   +V      + P NP+Y+
Sbjct: 88  WKYVNGEWVPGGKAEVPPSNPIYI 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,273
Number of Sequences: 336
Number of extensions: 2393
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)