Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1360
         (691 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AL021487-13|CAA16356.3|  326|Caenorhabditis elegans Hypothetical...    27   9.6  

>Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical
           protein T28F3.5 protein.
          Length = 1679

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 46  EGWKQLKKTYVSRDTLIIEPGNPMYLFICLRITNRVYSK 162
           +GWK  +K+Y  R  LI+E   P+   +   I+   YSK
Sbjct: 739 KGWKMEEKSYFERAKLILEGRGPLDYPVDSLISGLFYSK 777


>AL021487-13|CAA16356.3|  326|Caenorhabditis elegans Hypothetical
           protein Y45F10B.5 protein.
          Length = 326

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
 Frame = -3

Query: 563 VCTSVFVMFPTLGIIICSRRP----CVIC 489
           +C  +F++FPT+ +   + RP    C IC
Sbjct: 264 ICALIFIIFPTMAVYFIALRPFGNDCEIC 292


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,745,224
Number of Sequences: 27780
Number of extensions: 219019
Number of successful extensions: 487
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)