Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1359
(672 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 34 0.001
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 31 0.006
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 31 0.006
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 30 0.020
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 30 0.020
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 28 0.080
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 27 0.18
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 24 0.99
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 24 0.99
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 24 0.99
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 24 1.3
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 24 1.3
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 23 3.0
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 22 5.3
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 22 5.3
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 22 5.3
AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein. 22 5.3
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 22 5.3
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 21 6.9
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 21 9.2
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 21 9.2
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 34.3 bits (75), Expect = 0.001
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = -1
Query: 498 TDSVKMVIKNGVLMPKQK-QRRYRT---ERPFSCSQCSARFTLRSNMERHV 358
+D + VI + VL K Q YRT ERPF C C FT + N++ H+
Sbjct: 132 SDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHM 182
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 31.5 bits (68), Expect = 0.006
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -1
Query: 444 QRRYRTERPFSCSQCSARFTLRSNMERHVK 355
+R + E+PF C +C RFT +++ H++
Sbjct: 1 ERTHTGEKPFECQECHKRFTRDHHLKTHMR 30
Score = 31.5 bits (68), Expect = 0.006
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 453 KQKQRRYRTERPFSCSQCSARFTLRSNMERHVK 355
K R + ERP+ C C +F +N+ RH++
Sbjct: 26 KTHMRLHTGERPYRCEHCDRQFVQVANLRRHLR 58
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -1
Query: 441 RRYRTERPFSCSQCSAR 391
R + ERP+ C CS +
Sbjct: 58 RVHTGERPYGCEHCSMK 74
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 31.5 bits (68), Expect = 0.006
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -1
Query: 444 QRRYRTERPFSCSQCSARFTLRSNMERHVK 355
+R + E+PF C +C RFT +++ H++
Sbjct: 154 ERTHTGEKPFECQECHKRFTRDHHLKTHMR 183
Score = 31.5 bits (68), Expect = 0.006
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 453 KQKQRRYRTERPFSCSQCSARFTLRSNMERHVK 355
K R + ERP+ C C +F +N+ RH++
Sbjct: 179 KTHMRLHTGERPYRCEHCDRQFVQVANLRRHLR 211
Score = 28.7 bits (61), Expect = 0.046
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 441 RRYRTERPFSCSQCSARFTLRSNMERHV 358
R + ERP+ C CS +F+ + ++ HV
Sbjct: 211 RVHTGERPYGCEHCSMKFSDSNQLKAHV 238
Score = 28.3 bits (60), Expect = 0.061
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 435 YRTERPFSCSQCSARFTLRSNMERH 361
+ E+PF C +C RF R ++ H
Sbjct: 241 HTNEKPFECDKCRGRFRRRHHLVHH 265
Score = 23.8 bits (49), Expect = 1.3
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -1
Query: 426 ERPFSCSQCSARFTLRSNMERH 361
+RPF+C C+ F + ++ H
Sbjct: 132 DRPFTCEVCNRSFGYKHVLQNH 153
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 29.9 bits (64), Expect = 0.020
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 441 RRYRTERPFSCSQCSARFTLRSNMERHVK 355
R + E+P+ C C RF+ N+ RH++
Sbjct: 98 RIHSGEKPYECKLCLLRFSQSGNLNRHMR 126
Score = 28.3 bits (60), Expect = 0.061
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -1
Query: 453 KQKQRRYRTERPFSCSQCSARFTLRSNMERHVK 355
K R + E+P+ C C+ F+ +N+ HV+
Sbjct: 10 KTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVR 42
Score = 28.3 bits (60), Expect = 0.061
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 441 RRYRTERPFSCSQCSARFTLRSNMERHVK 355
R + E+PF C C RF+ S++ H++
Sbjct: 42 RTHSGEKPFRCPVCDRRFSQSSSVTTHMR 70
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 29.9 bits (64), Expect = 0.020
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 441 RRYRTERPFSCSQCSARFTLRSNMERHVK 355
R + E+P+ C C RF+ N+ RH++
Sbjct: 354 RIHSGEKPYECKLCLLRFSQSGNLNRHMR 382
Score = 28.3 bits (60), Expect = 0.061
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -1
Query: 453 KQKQRRYRTERPFSCSQCSARFTLRSNMERHVK 355
K R + E+P+ C C+ F+ +N+ HV+
Sbjct: 266 KTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVR 298
Score = 28.3 bits (60), Expect = 0.061
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 441 RRYRTERPFSCSQCSARFTLRSNMERHVK 355
R + E+PF C C RF+ S++ H++
Sbjct: 298 RTHSGEKPFRCPVCDRRFSQSSSVTTHMR 326
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 27.9 bits (59), Expect = 0.080
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -1
Query: 453 KQKQRRYRTERPFSCSQ--CSARFTLRSNMERHVK 355
K R + ERPF C+ C RFT ++RH++
Sbjct: 333 KAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLR 367
Score = 27.5 bits (58), Expect = 0.11
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -1
Query: 444 QRRYRT---ERPFSCSQCSARFTLRSNMERHVK 355
QR RT E+ F+C C+ RF ++ +HVK
Sbjct: 363 QRHLRTHTGEKRFACPICNKRFMRSDHLAKHVK 395
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 26.6 bits (56), Expect = 0.18
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -1
Query: 444 QRRYRTERPFSCSQCSARFTLRSNMERH 361
+R + ERP+SC C F + ++ H
Sbjct: 99 ERTHTDERPYSCDICGKAFRRQDHLRDH 126
Score = 25.8 bits (54), Expect = 0.32
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 462 LMPKQKQRRYRTERPFSCSQCSARFTLRSNMERH 361
L PK + + +R F C C+ +FT N+ H
Sbjct: 65 LQPKLVAGKLKPKRQFICKYCNRQFTKSYNLLIH 98
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 24.2 bits (50), Expect = 0.99
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = -1
Query: 441 RRYRTERPFSCSQCSARFTLRSNMERHVK 355
R + +PF C++C +S + H+K
Sbjct: 251 RNHAGSKPFQCNKCDYTCVNKSMLNSHMK 279
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 24.2 bits (50), Expect = 0.99
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 441 RRYRTERPFSCSQCSARF 388
R + E+PFSC+ C+ F
Sbjct: 28 RTHTGEKPFSCTYCNRAF 45
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 24.2 bits (50), Expect = 0.99
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = -1
Query: 441 RRYRTERPFSCSQCSARFTLRSNMERHVK 355
R + +PF C++C +S + H+K
Sbjct: 9 RNHAGSKPFQCNKCDYTCVNKSMLNSHMK 37
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 23.8 bits (49), Expect = 1.3
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 375 NMERHVKQQHPQH 337
+M H+++QHPQH
Sbjct: 166 HMGHHMQEQHPQH 178
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 23.8 bits (49), Expect = 1.3
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 375 NMERHVKQQHPQH 337
+M H+++QHPQH
Sbjct: 168 HMGHHMQEQHPQH 180
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 22.6 bits (46), Expect = 3.0
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2
Query: 560 SRALSPHPESPRPLS 516
S + SP PES RPLS
Sbjct: 217 SPSQSPEPESVRPLS 231
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 74 QYFGSCLSGCSMFFGFGFHIRFL 142
+ F S LS CS+ FG F ++ +
Sbjct: 93 EVFSSLLSCCSVIFGCIFALKVI 115
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 74 QYFGSCLSGCSMFFGFGFHIRFL 142
+ F S LS CS+ FG F ++ +
Sbjct: 93 EVFSSLLSCCSVIFGCIFALKVI 115
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 21.8 bits (44), Expect = 5.3
Identities = 8/37 (21%), Positives = 18/37 (48%)
Frame = +2
Query: 71 HQYFGSCLSGCSMFFGFGFHIRFLVNY*GVVLIFFII 181
H + ++ + FG G + F V++ + + F+I
Sbjct: 226 HHHLSKLVTRFNEIFGLGLLLMFAVSFLIITQVIFVI 262
>AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein.
Length = 150
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = -1
Query: 117 PKNILQPDKQLPKY*WLRDNKRSIKT 40
P + P +P+Y W+++ K + K+
Sbjct: 102 PHGMGSPGVNVPEYPWMKEKKTTRKS 127
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = -1
Query: 117 PKNILQPDKQLPKY*WLRDNKRSIKT 40
P + P +P+Y W+++ K + K+
Sbjct: 102 PHGMGSPGVNVPEYPWMKEKKTTRKS 127
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -2
Query: 350 SIPNTGVSVDPLKEAP 303
+IP+ G+ V+P +AP
Sbjct: 383 NIPSEGIKVEPRDKAP 398
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -1
Query: 120 NPKNILQPDKQLPKY*WLRDNKRSIKTLILK 28
N ++ QP LP Y W++ + K + K
Sbjct: 183 NLSSVPQPQPVLPTYKWMQVKRNVPKPTVPK 213
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -1
Query: 120 NPKNILQPDKQLPKY*WLRDNKRSIKTLILK 28
N ++ QP LP Y W++ + K + K
Sbjct: 183 NLSSVPQPQPVLPTYKWMQVKRNVPKPTVPK 213
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,496
Number of Sequences: 336
Number of extensions: 2967
Number of successful extensions: 37
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -