Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1359
(672 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 33 0.003
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 32 0.006
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 25 0.66
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 25 0.87
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 24 1.1
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 24 1.1
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 24 1.5
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 2.6
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 23 3.5
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 4.6
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 6.1
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 6.1
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 6.1
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 32.7 bits (71), Expect = 0.003
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -1
Query: 459 MPKQKQRRYRT---ERPFSCSQCSARFTLRSNMERH 361
+P + R YRT E+P+ C CS F+++ N+ H
Sbjct: 103 VPARLTRHYRTHTGEKPYQCEYCSKSFSVKENLSVH 138
Score = 26.6 bits (56), Expect = 0.21
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -1
Query: 441 RRYRT-ERPFSCSQCSARFTLRSNMERHVK 355
RR T ERP+ C C F + RH++
Sbjct: 139 RRIHTKERPYKCDVCERAFEHSGKLHRHMR 168
Score = 24.6 bits (51), Expect = 0.87
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -1
Query: 453 KQKQRRYRTERPFSCSQCSARFTLRSNMERHVK 355
K Q + E+ + C+ C F + ME H+K
Sbjct: 248 KLHQVAHYGEKVYKCTLCHETFGSKKTMELHIK 280
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -1
Query: 441 RRYRTERPFSCSQCSARFTLRSNMERHVK 355
R + ERP C+ CS F + H++
Sbjct: 168 RIHTGERPHKCTVCSKTFIQSGQLVIHMR 196
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/31 (25%), Positives = 14/31 (45%)
Frame = -1
Query: 453 KQKQRRYRTERPFSCSQCSARFTLRSNMERH 361
K R + E+P++C C F ++ H
Sbjct: 220 KVHTRTHTGEKPYTCDICGKSFGYNHVLKLH 250
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 31.9 bits (69), Expect = 0.006
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1
Query: 453 KQKQRRYRTERPFSCSQCSARFTLRSNMERHVK 355
K R + E+P+ CS C +F +N+ RH++
Sbjct: 26 KTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLR 58
Score = 31.1 bits (67), Expect = 0.010
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -1
Query: 444 QRRYRTERPFSCSQCSARFTLRSNMERHVK 355
+R + E+PF C +C RFT +++ H++
Sbjct: 1 ERTHTGEKPFECPECHKRFTRDHHLKTHMR 30
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 441 RRYRTERPFSCSQCSAR 391
R + ERP++C C+A+
Sbjct: 58 RVHTGERPYACELCAAK 74
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 25.0 bits (52), Expect = 0.66
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -1
Query: 417 FSCSQCSARFTLRSNMERHVKQQHPQ 340
++C C + + ++RH +QQH Q
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQ 397
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 24.6 bits (51), Expect = 0.87
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 441 RRYRTERPFSCSQCSARFTLRSNMERHVK 355
R + +PF C +CS +S + H+K
Sbjct: 9 RNHFGSKPFKCEKCSYSCVNKSMLNSHLK 37
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 24.2 bits (50), Expect = 1.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 441 RRYRTERPFSCSQCSARF 388
R + E+PFSC C+ F
Sbjct: 63 RTHTGEKPFSCQHCNRAF 80
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 24.2 bits (50), Expect = 1.1
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -1
Query: 420 PFSCSQCSARFTLRSNMERHVKQQHPQ 340
P C C F+ +++RH + +H Q
Sbjct: 5 PQECPYCRRNFSCYYSLKRHFQDKHEQ 31
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 23.8 bits (49), Expect = 1.5
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = -1
Query: 417 FSCSQCSARFTLRSNMERHVKQQHPQ 340
F+C C +++++RHV +H +
Sbjct: 6 FTCQLCGKVLCSKASLKRHVADKHAE 31
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 363 HVKQQHPQHWSVRRPAQRGPPP 298
H Q PQ S P+Q GPPP
Sbjct: 28 HQSPQAPQRGSPPNPSQ-GPPP 48
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = -1
Query: 417 FSCSQCSARFTLRSNMERHVKQQH 346
F C C+ T + + RH++ H
Sbjct: 3 FRCEPCNKILTSLTRLRRHIQNVH 26
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 384 LRSNMERHVKQQHPQHWSVRRPAQRGPPPYTSTDAL 277
LR+ ++ + Q HPQH + R + P + + L
Sbjct: 366 LRNALQTVLAQNHPQHPDILRELLKKIPDLRTLNTL 401
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 316 SKRPPTLHLYG 284
SKRP LHL+G
Sbjct: 662 SKRPDLLHLFG 672
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 316 SKRPPTLHLYG 284
SKRP LHL+G
Sbjct: 662 SKRPDLLHLFG 672
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 316 SKRPPTLHLYG 284
SKRP LHL+G
Sbjct: 662 SKRPDLLHLFG 672
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,471
Number of Sequences: 438
Number of extensions: 3280
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -