Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1358
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical p... 31 0.77
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 30 1.3
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 30 1.3
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 29 4.1
U49829-8|AAV28348.1| 515|Caenorhabditis elegans Hypothetical pr... 29 4.1
U49829-7|AAA93388.3| 513|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z98877-2|CAB11570.1| 907|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4 ho... 27 9.4
AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4 ho... 27 9.4
>Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical
protein Y69H2.11 protein.
Length = 887
Score = 31.1 bits (67), Expect = 0.77
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 486 DNSWQACSSSS*INSCLPGC*SSNTLCNKTIKAYKCT 596
D+ W + + I+ C+P S N+ C K Y CT
Sbjct: 404 DDGWTGTNCDTMIDFCIPNPCSYNSTCKPKFKGYDCT 440
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 152 QKTTKEHKFVV-ENHKKSRKLQTCLKLSFLH*WNYDLDSLTLSLSHIHYLVVNLNKKNFK 328
+K KE+K +V EN S Q L+ S ++ N +LD + + L + + V LN+K +
Sbjct: 412 EKIQKENKTIVKENVYLSESKQVLLE-SEINLKN-ELDEMAVKLRNSQHQVAGLNEKISE 469
Query: 329 QTSQELNQIVSVYGLEAENQVL 394
+ + Q V L+ +NQ L
Sbjct: 470 EKRRRKKQDADVTRLDEQNQKL 491
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 152 QKTTKEHKFVV-ENHKKSRKLQTCLKLSFLH*WNYDLDSLTLSLSHIHYLVVNLNKKNFK 328
+K KE+K +V EN S Q L+ S ++ N +LD + + L + + V LN+K +
Sbjct: 412 EKIQKENKTIVKENVYLSESKQVLLE-SEINLKN-ELDEMAVKLRNSQHQVAGLNEKISE 469
Query: 329 QTSQELNQIVSVYGLEAENQVL 394
+ + Q V L+ +NQ L
Sbjct: 470 EKRRRKKQDADVTRLDEQNQKL 491
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 486 DNSWQACSSSS*INSCLPGC*SSNTLCNKTIKAYKCT 596
D+ W + + I+ C+P S N+ C+ K + CT
Sbjct: 466 DSGWTGENCDTMIDYCIPNPCSYNSTCSPYFKGFNCT 502
>U49829-8|AAV28348.1| 515|Caenorhabditis elegans Hypothetical
protein F27D9.8b protein.
Length = 515
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 254 DLDSLTLSLSHIHYLVVNLNKKNFKQTSQELNQIVSVYGLEAENQVLRCLLTEAARIAW 430
D +L +SHI +++LN+K+ K +++ L+Q + + N+ L E +I W
Sbjct: 249 DTSALEQWISHISKHILSLNQKSIKMSNKYLHQSEQISYIGWVNEYLNDDDQEELKIRW 307
>U49829-7|AAA93388.3| 513|Caenorhabditis elegans Hypothetical
protein F27D9.8a protein.
Length = 513
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 254 DLDSLTLSLSHIHYLVVNLNKKNFKQTSQELNQIVSVYGLEAENQVLRCLLTEAARIAW 430
D +L +SHI +++LN+K+ K +++ L+Q + + N+ L E +I W
Sbjct: 249 DTSALEQWISHISKHILSLNQKSIKMSNKYLHQSEQISYIGWVNEYLNDDDQEELKIRW 307
>Z98877-2|CAB11570.1| 907|Caenorhabditis elegans Hypothetical
protein Y69H2.2 protein.
Length = 907
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +3
Query: 486 DNSWQACSSSS*INSCLPGC*SSNTLCNKTIKAYKCT 596
D+ W + + I+ C P N+ C K Y CT
Sbjct: 450 DDGWTGANCETMIDFCTPDPCKYNSTCTPKFKGYDCT 486
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 140 LSFRQKTTKE--HKFVVENHKKSRKLQTCLKLSFLH*WNYDLDSLTLSLSHIHYLVVNLN 313
++ R++T +E HK + E HK S+K LSF++ WN+ L L I + + N
Sbjct: 1734 MALRRRTERENVHK-LFEAHKISKKATVDKVLSFMNLWNFRATLFDLMLM-IKEISPDGN 1791
Query: 314 KKNFKQTSQELNQIVSVYG 370
++ +Q + + ++S G
Sbjct: 1792 SRHAQQGAIAADALMSEIG 1810
>AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4 homolog
protein 1, isoformb protein.
Length = 1420
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 149 RQKTTKEHKFVVENHKKSRKLQTCLKLSFLH*WNYDLDSLTLSLSHIHYLVVNLNKKNF 325
R ++K +ENHK++RK LKL L +D L + + + + N++NF
Sbjct: 1054 RSTSSKTSSSSMENHKRTRKENQMLKLQELEDKRNRIDYDNLQIGKV---ITDDNRRNF 1109
>AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4 homolog
protein 1, isoforma protein.
Length = 1418
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 149 RQKTTKEHKFVVENHKKSRKLQTCLKLSFLH*WNYDLDSLTLSLSHIHYLVVNLNKKNF 325
R ++K +ENHK++RK LKL L +D L + + + + N++NF
Sbjct: 1054 RSTSSKTSSSSMENHKRTRKENQMLKLQELEDKRNRIDYDNLQIGKV---ITDDNRRNF 1109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,310,438
Number of Sequences: 27780
Number of extensions: 278217
Number of successful extensions: 685
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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