Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1355
(763 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 186 1e-47
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 186 1e-47
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 186 1e-47
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 186 1e-47
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 186 1e-47
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 186 1e-47
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 186 1e-47
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 186 1e-47
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 186 1e-47
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 186 1e-47
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 182 2e-46
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 138 4e-33
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 138 4e-33
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 137 9e-33
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 137 9e-33
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 129 2e-30
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 106 2e-23
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 102 3e-22
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 82 5e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 37 0.014
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 37 0.014
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 33 0.29
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 32 0.39
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 30 1.6
Z46828-1|CAA86856.1| 542|Caenorhabditis elegans Hypothetical pr... 30 2.1
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 2.1
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 2.1
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 29 2.7
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical p... 29 3.6
AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical ... 29 3.6
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 29 3.6
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical pr... 29 4.8
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 29 4.8
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 29 4.8
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 29 4.8
AF101315-1|AAC69225.2| 369|Caenorhabditis elegans Hypothetical ... 29 4.8
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 29 4.8
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 29 4.8
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 29 4.8
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 4.8
Z82279-1|CAB05259.2| 321|Caenorhabditis elegans Hypothetical pr... 28 6.3
U55857-5|AAA98031.1| 602|Caenorhabditis elegans Hypothetical pr... 28 6.3
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 28 8.3
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 28 8.3
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 8.3
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 186 bits (454), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTT 150
Score = 138 bits (334), Expect = 4e-33
Identities = 63/64 (98%), Positives = 64/64 (100%)
Frame = +2
Query: 62 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 241
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 242 SKRG 253
SKRG
Sbjct: 61 SKRG 64
Score = 95.1 bits (226), Expect = 5e-20
Identities = 49/71 (69%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*R-SSPSAALVHYHRQREIV 686
G+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDL + + +REIV
Sbjct: 151 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 687 RDIKEKLCYVA 719
RDIKEKLCYVA
Sbjct: 211 RDIKEKLCYVA 221
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 186 bits (454), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTT 150
Score = 137 bits (331), Expect = 9e-33
Identities = 62/64 (96%), Positives = 64/64 (100%)
Frame = +2
Query: 62 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 241
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 242 SKRG 253
SKRG
Sbjct: 61 SKRG 64
Score = 95.5 bits (227), Expect = 4e-20
Identities = 50/71 (70%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*R-SSPSAALVHYHRQREIV 686
GIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDL + + +REIV
Sbjct: 151 GIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 687 RDIKEKLCYVA 719
RDIKEKLCYVA
Sbjct: 211 RDIKEKLCYVA 221
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 186 bits (454), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTT 150
Score = 138 bits (334), Expect = 4e-33
Identities = 63/64 (98%), Positives = 64/64 (100%)
Frame = +2
Query: 62 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 241
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 242 SKRG 253
SKRG
Sbjct: 61 SKRG 64
Score = 95.1 bits (226), Expect = 5e-20
Identities = 49/71 (69%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*R-SSPSAALVHYHRQREIV 686
G+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDL + + +REIV
Sbjct: 151 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 687 RDIKEKLCYVA 719
RDIKEKLCYVA
Sbjct: 211 RDIKEKLCYVA 221
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 186 bits (454), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTT 150
Score = 138 bits (334), Expect = 4e-33
Identities = 63/64 (98%), Positives = 64/64 (100%)
Frame = +2
Query: 62 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 241
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 242 SKRG 253
SKRG
Sbjct: 61 SKRG 64
Score = 95.1 bits (226), Expect = 5e-20
Identities = 49/71 (69%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*R-SSPSAALVHYHRQREIV 686
G+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDL + + +REIV
Sbjct: 151 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 687 RDIKEKLCYVA 719
RDIKEKLCYVA
Sbjct: 211 RDIKEKLCYVA 221
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 186 bits (454), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTT 150
Score = 138 bits (334), Expect = 4e-33
Identities = 63/64 (98%), Positives = 64/64 (100%)
Frame = +2
Query: 62 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 241
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 242 SKRG 253
SKRG
Sbjct: 61 SKRG 64
Score = 95.1 bits (226), Expect = 5e-20
Identities = 49/71 (69%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*R-SSPSAALVHYHRQREIV 686
G+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDL + + +REIV
Sbjct: 151 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 687 RDIKEKLCYVA 719
RDIKEKLCYVA
Sbjct: 211 RDIKEKLCYVA 221
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 186 bits (454), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTT 150
Score = 135 bits (327), Expect = 3e-32
Identities = 60/64 (93%), Positives = 64/64 (100%)
Frame = +2
Query: 62 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 241
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 242 SKRG 253
SKRG
Sbjct: 61 SKRG 64
Score = 95.5 bits (227), Expect = 4e-20
Identities = 50/71 (70%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*R-SSPSAALVHYHRQREIV 686
GIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDL + + +REIV
Sbjct: 151 GIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 687 RDIKEKLCYVA 719
RDIKEKLCYVA
Sbjct: 211 RDIKEKLCYVA 221
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 186 bits (454), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTT 150
Score = 138 bits (334), Expect = 4e-33
Identities = 63/64 (98%), Positives = 64/64 (100%)
Frame = +2
Query: 62 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 241
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 242 SKRG 253
SKRG
Sbjct: 61 SKRG 64
Score = 95.1 bits (226), Expect = 5e-20
Identities = 49/71 (69%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*R-SSPSAALVHYHRQREIV 686
G+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDL + + +REIV
Sbjct: 151 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 687 RDIKEKLCYVA 719
RDIKEKLCYVA
Sbjct: 211 RDIKEKLCYVA 221
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 186 bits (454), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 22 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 81
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 82 ETFNTPAMYVAIQAVLSLYASGRTT 106
Score = 95.1 bits (226), Expect = 5e-20
Identities = 49/71 (69%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*R-SSPSAALVHYHRQREIV 686
G+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDL + + +REIV
Sbjct: 107 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 166
Query: 687 RDIKEKLCYVA 719
RDIKEKLCYVA
Sbjct: 167 RDIKEKLCYVA 177
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 194 MVGMGQKDSYVGDEAQSKRG 253
MVGMGQKDSYVGDEAQSKRG
Sbjct: 1 MVGMGQKDSYVGDEAQSKRG 20
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 186 bits (454), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 52 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 111
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 112 ETFNTPAMYVAIQAVLSLYASGRTT 136
Score = 99 bits (238), Expect = 2e-21
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +2
Query: 116 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 253
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 50
Score = 95.1 bits (226), Expect = 5e-20
Identities = 49/71 (69%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*R-SSPSAALVHYHRQREIV 686
G+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDL + + +REIV
Sbjct: 137 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 196
Query: 687 RDIKEKLCYVA 719
RDIKEKLCYVA
Sbjct: 197 RDIKEKLCYVA 207
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 186 bits (454), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTT 150
Score = 138 bits (334), Expect = 4e-33
Identities = 63/64 (98%), Positives = 64/64 (100%)
Frame = +2
Query: 62 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 241
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 242 SKRG 253
SKRG
Sbjct: 61 SKRG 64
Score = 95.1 bits (226), Expect = 5e-20
Identities = 49/71 (69%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*R-SSPSAALVHYHRQREIV 686
G+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDL + + +REIV
Sbjct: 151 GVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 687 RDIKEKLCYVA 719
RDIKEKLCYVA
Sbjct: 211 RDIKEKLCYVA 221
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 182 bits (444), Expect = 2e-46
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMF
Sbjct: 65 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMF 124
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFNTPAMYV IQAVLSLYASGRTT
Sbjct: 125 ETFNTPAMYVNIQAVLSLYASGRTT 149
Score = 132 bits (318), Expect = 3e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +2
Query: 68 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 247
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 248 RG 253
RG
Sbjct: 62 RG 63
Score = 93.1 bits (221), Expect = 2e-19
Identities = 48/71 (67%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*RSSPSAALVH-YHRQREIV 686
GIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRDL + +REIV
Sbjct: 150 GIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIV 209
Query: 687 RDIKEKLCYVA 719
RDIKEKLCYVA
Sbjct: 210 RDIKEKLCYVA 220
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 138 bits (334), Expect = 4e-33
Identities = 63/64 (98%), Positives = 64/64 (100%)
Frame = +2
Query: 62 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 241
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 242 SKRG 253
SKRG
Sbjct: 61 SKRG 64
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKI 318
LTLKYPIEHGIVTNWDDMEKI
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 138 bits (334), Expect = 4e-33
Identities = 63/64 (98%), Positives = 64/64 (100%)
Frame = +2
Query: 62 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 241
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 242 SKRG 253
SKRG
Sbjct: 61 SKRG 64
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKI 318
LTLKYPIEHGIVTNWDDMEKI
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 137 bits (331), Expect = 9e-33
Identities = 62/64 (96%), Positives = 64/64 (100%)
Frame = +2
Query: 62 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 241
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 242 SKRG 253
SKRG
Sbjct: 61 SKRG 64
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKI 318
LTLKYPIEHGIVTNWDDMEKI
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 137 bits (331), Expect = 9e-33
Identities = 62/64 (96%), Positives = 64/64 (100%)
Frame = +2
Query: 62 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 241
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 242 SKRG 253
SKRG
Sbjct: 61 SKRG 64
Score = 45.2 bits (102), Expect = 5e-05
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDM 309
LTLKYPIEHGIVTNWDDM
Sbjct: 66 LTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 129 bits (312), Expect = 2e-30
Identities = 55/85 (64%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Frame = +1
Query: 259 TLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
+++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I F
Sbjct: 69 SIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFF 128
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFN PA+Y+ +QAVLSLYA+GRTT
Sbjct: 129 ETFNVPALYIQMQAVLSLYATGRTT 153
Score = 72.9 bits (171), Expect = 2e-13
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*RSSPSAALVHYHRQR--EI 683
G+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+ T R +HR EI
Sbjct: 154 GVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDV-TEYLRVLLRREGYEFHRSNEFEI 212
Query: 684 VRDIKEKLCYVA 719
VR++KE CY+A
Sbjct: 213 VREMKENACYLA 224
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/56 (48%), Positives = 39/56 (69%)
Frame = +2
Query: 86 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 253
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRG 66
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 106 bits (254), Expect = 2e-23
Identities = 48/92 (52%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Frame = +1
Query: 238 TEQKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANRE 414
++ ++ L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NRE
Sbjct: 62 SQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNRE 121
Query: 415 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 510
KM Q+MFE + ++YVA+QAVL+LYA G T
Sbjct: 122 KMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLT 153
Score = 68.5 bits (160), Expect = 5e-12
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*RSSPSAALVHYH-RQREIV 686
G+V+DSGDGV+H P+YEG+AL H RLD+AGRD+ + H E V
Sbjct: 154 GVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETV 213
Query: 687 RDIKEKLCYVA 719
R +KEKLCY+A
Sbjct: 214 RQMKEKLCYIA 224
Score = 48.4 bits (110), Expect = 6e-06
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +2
Query: 86 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKR 250
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E R
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLR 65
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 102 bits (244), Expect = 3e-22
Identities = 45/80 (56%), Positives = 56/80 (70%)
Frame = +1
Query: 259 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 438
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 439 TFNTPAMYVAIQAVLSLYAS 498
+FN P +Y+A+QAVL+L AS
Sbjct: 140 SFNVPGLYIAVQAVLALTAS 159
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = +3
Query: 498 RSYHGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*RS--SPSAALVHYHR 671
RS G+V+DSGDGV+H +P+ +GY + I + +AGRD+ T +S + +
Sbjct: 168 RSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDI-TYFIQSLLRDREHTIPAEQ 226
Query: 672 QREIVRDIKEKLCYV 716
E+ + IKEK CYV
Sbjct: 227 SYEVAKMIKEKFCYV 241
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 62 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 169
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 81.8 bits (193), Expect = 5e-16
Identities = 36/78 (46%), Positives = 52/78 (66%)
Frame = +1
Query: 274 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 453
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 454 AMYVAIQAVLSLYASGRT 507
A Y++ VLS +A GRT
Sbjct: 154 AYYLSKNVVLSCFAQGRT 171
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/39 (41%), Positives = 28/39 (71%)
Frame = +3
Query: 507 HGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQT 623
HG+++DSG + VP+++GYA+ HA+++ + G DL T
Sbjct: 172 HGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGG-DLIT 209
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 169
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.014
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 271 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 444
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = +3
Query: 513 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*RSSPSAALVHYHRQREIVRD 692
+V+DSG + G + +++R+D+ G+ L T + S ++ + ++ +
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKAL-TNKLKDWVSYRQLNVSEETYVINE 204
Query: 693 IKEKLCYVA 719
KE LC+V+
Sbjct: 205 CKEDLCFVS 213
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.014
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 271 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 444
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = +3
Query: 513 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*RSSPSAALVHYHRQREIVRD 692
+V+DSG + G + +++R+D+ G+ L T + S ++ + ++ +
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKAL-TNKLKDWVSYRQLNVSEETYVINE 204
Query: 693 IKEKLCYVA 719
KE LC+V+
Sbjct: 205 CKEDLCFVS 213
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 32.7 bits (71), Expect = 0.29
Identities = 25/112 (22%), Positives = 40/112 (35%)
Frame = +1
Query: 379 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTVSCWTPATVSPTPCPS 558
TE P + T T TP + + TT + T T +PT +
Sbjct: 137 TETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTT--TTPTTTTTTPTTTTTTPTTTTT 194
Query: 559 TKDTHSPTPSCVWT*PVATSRLPHEDPHRARLSFTTTASGKSFVTSRRSCAT 714
T + TP+ T P T+ +P + TTT + + T+ + T
Sbjct: 195 APTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTT 246
Score = 31.9 bits (69), Expect = 0.51
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 3/120 (2%)
Frame = +1
Query: 367 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTVSCWTPATVSPT 546
P T AP T T P + + TT + TP T + T
Sbjct: 189 PTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTT-TPTTTT-T 246
Query: 547 PCPSTKDTHSPTPSC---VWT*PVATSRLPHEDPHRARLSFTTTASGKSFVTSRRSCATS 717
P +T +T + TP+ T P T+ P P TTT + K+ ++ + T+
Sbjct: 247 PATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTT 306
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/113 (21%), Positives = 37/113 (32%)
Frame = +1
Query: 379 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTVSCWTPATVSPTPCPS 558
TE P T T T + TT + T T +PT +
Sbjct: 114 TETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTT 173
Query: 559 TKDTHSPTPSCVWT*PVATSRLPHEDPHRARLSFTTTASGKSFVTSRRSCATS 717
T T + TP+ T P T+ P + TT + + T+ + T+
Sbjct: 174 TPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTT 226
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/70 (25%), Positives = 27/70 (38%)
Frame = +1
Query: 508 TVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSRLPHEDPHRARLSFTTTASGKSF 687
T + TP T + TP +T+ T +PT T T P TTT + +
Sbjct: 89 TTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTT 148
Query: 688 VTSRRSCATS 717
T+ T+
Sbjct: 149 ETTTTPTTTT 158
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +1
Query: 505 TTVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSRLPHEDPHRARLSFTTTASGKS 684
TT S T +T + T P+T T + TP+ T P T+ P T T + +
Sbjct: 63 TTTSTTTTSTTTTTT-PTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPT 121
Query: 685 FVTSRRSCAT 714
T + T
Sbjct: 122 TTTPTTTTTT 131
Score = 27.9 bits (59), Expect = 8.3
Identities = 27/116 (23%), Positives = 39/116 (33%), Gaps = 3/116 (2%)
Frame = +1
Query: 379 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTVSCWTPATVSPTPCPS 558
T P E T ET TP + + T + T T T P+
Sbjct: 96 TTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPT 155
Query: 559 TKDTHSPTPSCVWT*PVATSRLP---HEDPHRARLSFTTTASGKSFVTSRRSCATS 717
T T TP+ T P T+ P P + TTT + + T+ + T+
Sbjct: 156 TTTT---TPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTT 208
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 32.3 bits (70), Expect = 0.39
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -2
Query: 252 PLLLCASSPT*ESFCPIPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAAT 76
PL++ +SS S TITP +G+PT N S+P P + STT A +
Sbjct: 464 PLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATS 523
Query: 75 SSS 67
++S
Sbjct: 524 TAS 526
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = -3
Query: 323 CQIFSMSSQLVTIPC-SMGYLRVRYLFCSVPHLLHKSPSVP-YRPSRPD 183
CQ+FS QLVT+ SMG ++++ + +P L KS + P P+ P+
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPE 299
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +1
Query: 505 TTVSCWTPATVSPTPC--PSTKDTHSPTPSCVWT*PVATSRLPHEDPHRARLSFTTTASG 678
TT + P+TV T P+T T +PT S T + TS P+ + + TTTA
Sbjct: 156 TTSTLSPPSTVQSTTTAKPTTTSTITPTTSADPTSTITTSTTPNPS-SPSTVQSTTTAEP 214
Query: 679 KSFVTS 696
S +TS
Sbjct: 215 TSTITS 220
>Z46828-1|CAA86856.1| 542|Caenorhabditis elegans Hypothetical
protein R03D7.2 protein.
Length = 542
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +3
Query: 534 GVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*RSSPSAALVHYHRQREIVRDIKEKLCY 713
G H +P Y ALP + R + R PS L HR +++ ++ L Y
Sbjct: 248 GDMHQLPPYMEEALPAELKRAAIGEPLTLAVKGRRWPSMHLTRVHRCPKMITEVLGDLFY 307
Query: 714 VASLTSSR 737
+LTSS+
Sbjct: 308 GNTLTSSK 315
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -3
Query: 248 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 93
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -3
Query: 248 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 93
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = +1
Query: 505 TTVSCWTPATVSPTPCPSTKD---THSPTPSCVWT*PVATSRLPHEDPHRARLSFTTTAS 675
TT T A + P+P P T T +PT T T+ P P R R TTTA+
Sbjct: 324 TTPLATTRAPLPPSPPPRTSKRPVTQAPTTPRATTTRRPTTTTPRPTPRRTRRPKTTTAA 383
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 505 TTVSCWTPATVSPTPCPSTKD--THSPTPSCVWT*PVATSRLPHEDPHRARLSFTTTASG 678
T+ +C + TVS T +T T + TP+ T P T+ P P + TTT +
Sbjct: 241 TSYTCASTTTVSTTSTVTTTKPTTTTTTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTT- 299
Query: 679 KSFVTSRRSCAT 714
+S T S T
Sbjct: 300 ESTTTETTSTTT 311
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/59 (30%), Positives = 22/59 (37%)
Frame = +1
Query: 493 ASGRTTVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSRLPHEDPHRARLSFTTT 669
AS T + T T PT +T T + TP+ T P T P TTT
Sbjct: 246 ASTTTVSTTSTVTTTKPTTTTTTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTESTTT 304
>Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 502 RTTVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSRLPHEDPHRAR 651
+TT + P+T + T ST T SPT + + T T DP+R R
Sbjct: 133 QTTTTTTIPSTTTMTESSSTSTTASPTTTRIRTWTYTTRYPSVHDPNRHR 182
>AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 502 RTTVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSRLPHEDPHRAR 651
+TT + P+T + T ST T SPT + + T T DP+R R
Sbjct: 133 QTTTTTTIPSTTTMTESSSTSTTASPTTTRIRTWTYTTRYPSVHDPNRHR 182
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/53 (45%), Positives = 30/53 (56%)
Frame = +2
Query: 527 RRRCLPHRAHLRRIRTPPRHPASGLSRSRPPDYLMKILTERGSRSLPPPAGNR 685
RRR + R+ +RR R+PPR S SRS PP ++ SRS PPPA R
Sbjct: 119 RRRRIS-RSPVRRSRSPPRRQVS-RSRSPPP------RRQQRSRS-PPPAKRR 162
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 505 TTVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSRLP 627
TT + T T +PT +T T + TP+ T P T+ P
Sbjct: 90 TTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTP 130
>Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical
protein M05B5.3 protein.
Length = 403
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 493 ASGRTTVSCWTPATVSPTPCPS-TKDTHSPTPSCV 594
AS T VS + A +P P PS T +T S TPS V
Sbjct: 211 ASSETRVSIESDAPPNPAPPPSTTPETSSTTPSTV 245
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical
protein T13H2.5b protein.
Length = 1092
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/62 (35%), Positives = 26/62 (41%)
Frame = +2
Query: 434 SKHSTRPPCTSPSKPCSRCTRPVVPRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSR 613
S S+ P PS+PCS RP P +R R A + R PP SRSR
Sbjct: 11 SSKSSAPATRRPSRPCSSYDRPSSP--SVVIRERLGSDGALINR---PPNRCNIDKSRSR 65
Query: 614 PP 619
P
Sbjct: 66 SP 67
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/62 (35%), Positives = 26/62 (41%)
Frame = +2
Query: 434 SKHSTRPPCTSPSKPCSRCTRPVVPRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSR 613
S S+ P PS+PCS RP P +R R A + R PP SRSR
Sbjct: 1390 SSKSSAPATRRPSRPCSSYDRPSSP--SVVIRERLGSDGALINR---PPNRCNIDKSRSR 1444
Query: 614 PP 619
P
Sbjct: 1445 SP 1446
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.7 bits (61), Expect = 4.8
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +3
Query: 345 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRHPSRALAVRVRSYHGI 515
AC GT SPA GSP PQ D + N Q + VRRH ++
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRHDEEEFELKKVQ---- 1285
Query: 516 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*RSSPSAALV 659
+ + D + + + + LRL+ G+DL+ T + S A V
Sbjct: 1286 LKEQFDLLRKLMSEAQKNQMLALKLRLEAEGKDLKQTQTKKSMEDAKV 1333
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.7 bits (61), Expect = 4.8
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +3
Query: 345 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRHPSRALAVRVRSYHGI 515
AC GT SPA GSP PQ D + N Q + VRRH ++
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRHDEEEFELKKVQ---- 1298
Query: 516 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*RSSPSAALV 659
+ + D + + + + LRL+ G+DL+ T + S A V
Sbjct: 1299 LKEQFDLLRKLMSEAQKNQMLALKLRLEAEGKDLKQTQTKKSMEDAKV 1346
>AF101315-1|AAC69225.2| 369|Caenorhabditis elegans Hypothetical
protein T22H9.4 protein.
Length = 369
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/69 (31%), Positives = 30/69 (43%)
Frame = +1
Query: 490 YASGRTTVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSRLPHEDPHRARLSFTTT 669
+++G + T A S +P S +T SP P + P+A LP P LSF T
Sbjct: 251 FSAGGFMIPAATSANASTSPAGSPFETTSPMPLLLPHSPIA---LPQLAPSSLPLSFLTV 307
Query: 670 ASGKSFVTS 696
S S S
Sbjct: 308 PSLMSTAAS 316
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.7 bits (61), Expect = 4.8
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +3
Query: 345 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRHPSRALAVRVRSYHGI 515
AC GT SPA GSP PQ D + N Q + VRRH ++
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRHDEEEFELKKVQ---- 1286
Query: 516 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*RSSPSAALV 659
+ + D + + + + LRL+ G+DL+ T + S A V
Sbjct: 1287 LKEQFDLLRKLMSEAQKNQMLALKLRLEAEGKDLKQTQTKKSMEDAKV 1334
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.7 bits (61), Expect = 4.8
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +3
Query: 345 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRHPSRALAVRVRSYHGI 515
AC GT SPA GSP PQ D + N Q + VRRH ++
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRHDEEEFELKKVQ---- 1298
Query: 516 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*RSSPSAALV 659
+ + D + + + + LRL+ G+DL+ T + S A V
Sbjct: 1299 LKEQFDLLRKLMSEAQKNQMLALKLRLEAEGKDLKQTQTKKSMEDAKV 1346
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 418 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTVSCWTPATVSPTPCPSTKDTHSPTP 585
+ Q+M F A A S + T S + A+ +PTP PS++ T PTP
Sbjct: 127 LLQVMAMVFQEKCPVFARSAANSATNASATNPSAGSSASSTPTPYPSSQPT-MPTP 181
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +3
Query: 354 PRGTPSPAH*GSP---QPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHGIVLD 524
P+ T +P +P QP Q P+ NI+ A HV PS SY+ + D
Sbjct: 1814 PQETQAPIAPSNPEPVQPNPSQTVSIPEPTGNIEEAEHVDAKPSYP---GQSSYNNLEED 1870
Query: 525 SGDGVSHTVPIYEGYALPHA 584
+G +P E ++P A
Sbjct: 1871 HEEGHIAELPALEPVSVPTA 1890
>Z82279-1|CAB05259.2| 321|Caenorhabditis elegans Hypothetical
protein R03C1.1 protein.
Length = 321
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 520 WTPATVSPTPCPSTK--DTHSPTPSCVWT*PVATSRLPHEDPHRARLSFTTT 669
+ P +PTP P+T+ T +PT T P ++S + + D + TTT
Sbjct: 210 YAPVQTTPTPMPTTQVPTTQAPTTQAP-TMPTSSSPVQYADTAATQYPLTTT 260
>U55857-5|AAA98031.1| 602|Caenorhabditis elegans Hypothetical
protein K08D10.5 protein.
Length = 602
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +3
Query: 534 GVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*RSSPSAALVHYHRQREIVRDIKEKLCY 713
G H +P Y ALP + R + R S L HR +++ D+ + Y
Sbjct: 347 GDMHQLPPYTEDALPAELKRAAVGEPLTLAVKGRRWSSMHLTRVHRCPKMITDLLGAVFY 406
Query: 714 VASLTSSRK 740
+LTS+RK
Sbjct: 407 GNTLTSTRK 415
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +1
Query: 532 TVSPTPCPSTKDTHSPTPSCVWT*PVATSRLPHEDPHRARLSFTTTASGKSFVTSRRSCA 711
T +P PCP+T T + + V T +T+ P S TT + ++ TS +
Sbjct: 439 TTTPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVPV-TSTTTEPTTTTYTTSTSTST 497
Query: 712 TSLL 723
T+ L
Sbjct: 498 TTTL 501
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +1
Query: 292 TNWD-DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA--NREKMTQIMFETFNTPAMY 462
T WD D +++ F ++L APE+ ++L NP ++ +++ E ++
Sbjct: 152 TFWDYDNKRVHIEKFLSDLESAPEKSVIILHGCAHNPTGMDPTQEQWKLVAEVIKRKNLF 211
Query: 463 VAIQAVLSLYASGRTTVSCW 522
+ASG W
Sbjct: 212 TFFDIAYQGFASGDPAADAW 231
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = +1
Query: 505 TTVSCWTPATV-----SPTPCPSTKDTHSPTPSCVWT*PVATSRLPHE-DPHRARLSFTT 666
TTVS +P T +PTP P+T +T P+ V TS+ + PH + ++ +
Sbjct: 473 TTVSTMSPPTTVTVPTTPTPVPTTTNTPPANPTTATPTTVGTSKQTNTISPHLSTITGSI 532
Query: 667 TAS 675
S
Sbjct: 533 VTS 535
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 116 KAGFAGDDAPRAVFPSIVGRPRHQG 190
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,407,391
Number of Sequences: 27780
Number of extensions: 476566
Number of successful extensions: 2243
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2189
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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