Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1355
(763 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 185 3e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 184 4e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 184 4e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 183 1e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 182 2e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 182 2e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 182 2e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 182 2e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 182 2e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 165 2e-41
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 161 5e-40
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 161 5e-40
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 114 7e-26
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 100 9e-22
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 89 2e-18
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 72 5e-13
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 4e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 58 5e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 51 1e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.12
At1g16690.2 68414.m01999 transcription factor-related similar to... 33 0.21
At1g16690.1 68414.m01998 transcription factor-related similar to... 33 0.21
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 33 0.27
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 33 0.27
At3g18690.1 68416.m02374 VQ motif-containing protein contains PF... 30 1.5
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 30 1.9
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 29 2.6
At2g20960.1 68415.m02479 expressed protein pEARLI 4 gene product... 29 4.5
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 28 5.9
At1g17460.1 68414.m02141 myb family transcription factor contain... 28 5.9
At5g29020.1 68418.m03592 hypothetical protein 28 7.8
At3g28790.1 68416.m03593 expressed protein 28 7.8
At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C... 28 7.8
At2g28440.1 68415.m03455 proline-rich family protein contains pr... 28 7.8
At1g76110.1 68414.m08838 high mobility group (HMG1/2) family pro... 28 7.8
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 185 bits (450), Expect = 3e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 127 ETFNTPAMYVAIQAVLSLYASGRTT 151
Score = 115 bits (276), Expect = 4e-26
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 G 253
G
Sbjct: 65 G 65
Score = 92.7 bits (220), Expect = 2e-19
Identities = 48/71 (67%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*R-SSPSAALVHYHRQREIV 686
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL + + +REIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIV 211
Query: 687 RDIKEKLCYVA 719
RD+KEKL Y+A
Sbjct: 212 RDVKEKLAYIA 222
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 127 ETFNTPAMYVAIQAVLSLYASGRTT 151
Score = 115 bits (276), Expect = 4e-26
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 G 253
G
Sbjct: 65 G 65
Score = 91.1 bits (216), Expect = 7e-19
Identities = 48/71 (67%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*R-SSPSAALVHYHRQREIV 686
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL + + +REIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIV 211
Query: 687 RDIKEKLCYVA 719
RD+KEKL Y+A
Sbjct: 212 RDMKEKLSYIA 222
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 127 ETFNTPAMYVAIQAVLSLYASGRTT 151
Score = 115 bits (276), Expect = 4e-26
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 G 253
G
Sbjct: 65 G 65
Score = 91.1 bits (216), Expect = 7e-19
Identities = 48/71 (67%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*R-SSPSAALVHYHRQREIV 686
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL + + +REIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIV 211
Query: 687 RDIKEKLCYVA 719
RD+KEKL Y+A
Sbjct: 212 RDMKEKLSYIA 222
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 183 bits (445), Expect = 1e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFN PAMYVAIQAVLSLYASGRTT
Sbjct: 127 ETFNVPAMYVAIQAVLSLYASGRTT 151
Score = 115 bits (276), Expect = 4e-26
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 G 253
G
Sbjct: 65 G 65
Score = 95.9 bits (228), Expect = 3e-20
Identities = 50/71 (70%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*R-SSPSAALVHYHRQREIV 686
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL + + + + +REIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIV 211
Query: 687 RDIKEKLCYVA 719
RDIKEKL YVA
Sbjct: 212 RDIKEKLAYVA 222
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 182 bits (444), Expect = 2e-46
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 127 ETFNSPAMYVAIQAVLSLYASGRTT 151
Score = 110 bits (265), Expect = 9e-25
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 251 G 253
G
Sbjct: 65 G 65
Score = 89.8 bits (213), Expect = 2e-18
Identities = 47/71 (66%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*R-SSPSAALVHYHRQREIV 686
GIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDL + + + +REIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIV 211
Query: 687 RDIKEKLCYVA 719
RDIKEKL +VA
Sbjct: 212 RDIKEKLSFVA 222
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 182 bits (444), Expect = 2e-46
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 127 ETFNSPAMYVAIQAVLSLYASGRTT 151
Score = 110 bits (265), Expect = 9e-25
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 251 G 253
G
Sbjct: 65 G 65
Score = 89.8 bits (213), Expect = 2e-18
Identities = 47/71 (66%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*R-SSPSAALVHYHRQREIV 686
GIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDL + + + +REIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIV 211
Query: 687 RDIKEKLCYVA 719
RDIKEKL +VA
Sbjct: 212 RDIKEKLSFVA 222
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 182 bits (444), Expect = 2e-46
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 127 ETFNSPAMYVAIQAVLSLYASGRTT 151
Score = 110 bits (265), Expect = 9e-25
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 251 G 253
G
Sbjct: 65 G 65
Score = 89.8 bits (213), Expect = 2e-18
Identities = 47/71 (66%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*R-SSPSAALVHYHRQREIV 686
GIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDL + + + +REIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIV 211
Query: 687 RDIKEKLCYVA 719
RDIKEKL +VA
Sbjct: 212 RDIKEKLSFVA 222
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMF 126
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFN PAMYVAIQAVLSLYASGRTT
Sbjct: 127 ETFNAPAMYVAIQAVLSLYASGRTT 151
Score = 115 bits (276), Expect = 4e-26
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 G 253
G
Sbjct: 65 G 65
Score = 97.1 bits (231), Expect = 1e-20
Identities = 50/71 (70%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*R-SSPSAALVHYHRQREIV 686
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL + + +REIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIV 211
Query: 687 RDIKEKLCYVA 719
RDIKEKLCY+A
Sbjct: 212 RDIKEKLCYIA 222
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMF 126
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETFN PAMYVAIQAVLSLYASGRTT
Sbjct: 127 ETFNAPAMYVAIQAVLSLYASGRTT 151
Score = 115 bits (276), Expect = 4e-26
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 G 253
G
Sbjct: 65 G 65
Score = 97.1 bits (231), Expect = 1e-20
Identities = 50/71 (70%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*R-SSPSAALVHYHRQREIV 686
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL + + +REIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIV 211
Query: 687 RDIKEKLCYVA 719
RDIKEKLCY+A
Sbjct: 212 RDIKEKLCYIA 222
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 165 bits (402), Expect = 2e-41
Identities = 71/85 (83%), Positives = 80/85 (94%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
L+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQIMF
Sbjct: 68 LSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMF 127
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
E+F P+MY+ IQAVLSLY+SGRTT
Sbjct: 128 ESFAFPSMYIGIQAVLSLYSSGRTT 152
Score = 107 bits (256), Expect = 1e-23
Identities = 46/61 (75%), Positives = 56/61 (91%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 251 G 253
G
Sbjct: 66 G 66
Score = 98.7 bits (235), Expect = 4e-21
Identities = 50/71 (70%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*RSSPSAALVH-YHRQREIV 686
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL + + +REIV
Sbjct: 153 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYTTSAEREIV 212
Query: 687 RDIKEKLCYVA 719
RDIKEKLCY+A
Sbjct: 213 RDIKEKLCYIA 223
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 161 bits (391), Expect = 5e-40
Identities = 70/85 (82%), Positives = 80/85 (94%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMF
Sbjct: 22 LTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQIMF 81
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTT 510
ETF P+MY+ +QA LSL+ASGRTT
Sbjct: 82 ETFAVPSMYIGMQAALSLHASGRTT 106
Score = 77.4 bits (182), Expect = 1e-14
Identities = 42/70 (60%), Positives = 49/70 (70%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*RSSPSAALVHYHRQREIVR 689
G VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR L T+ + +RE+VR
Sbjct: 107 GTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHL--TNYLMKIMMERGYTSAEREVVR 164
Query: 690 DIKEKLCYVA 719
DIKE+ Y+A
Sbjct: 165 DIKEQFGYIA 174
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 194 MVGMGQKDSYVGDEAQSKRG 253
MVGM + D +VGD+A+++ G
Sbjct: 1 MVGMNENDLFVGDDAEARSG 20
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 161 bits (391), Expect = 5e-40
Identities = 76/107 (71%), Positives = 86/107 (80%)
Frame = +1
Query: 190 RDGRYGTEGLLCRR*GTEQKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 369
RDG E + G + LTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 370 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 510
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+SGRTT
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTT 140
Score = 87.4 bits (207), Expect = 9e-18
Identities = 44/71 (61%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQTTS*RSSPSAALVH-YHRQREIV 686
G+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDL + +REIV
Sbjct: 141 GVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSAEREIV 200
Query: 687 RDIKEKLCYVA 719
RDIKEKLCYVA
Sbjct: 201 RDIKEKLCYVA 211
Score = 61.7 bits (143), Expect = 5e-10
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +2
Query: 86 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANR 53
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 114 bits (274), Expect = 7e-26
Identities = 47/91 (51%), Positives = 64/91 (70%)
Frame = +1
Query: 238 TEQKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 417
+E + L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 418 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT 510
M + MFE +N +++ IQAVL+LYA G T
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYAQGLLT 150
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQT-TS*RSSPSAALVHYHRQREIV 686
G+V+DSGDGV+H VP+ +GY+ PH R+++AGR + S ++ E V
Sbjct: 151 GLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTADFETV 210
Query: 687 RDIKEKLCYVA 719
R+IKEKLCY++
Sbjct: 211 REIKEKLCYIS 221
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +2
Query: 86 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKR 250
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELR 63
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 100 bits (240), Expect = 9e-22
Identities = 45/86 (52%), Positives = 59/86 (68%)
Frame = +1
Query: 262 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 441
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 442 FNTPAMYVAIQAVLSLYASGRTTVSC 519
FN P +Y+A+ +VL+L A+G TT C
Sbjct: 146 FNVPGLYIAVNSVLAL-AAGYTTSKC 170
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLQT-TS*RSSPSAALVHYHRQREIV 686
G+V+D GDG +H VP+ EGY + I + +AG+D+ + ++
Sbjct: 174 GVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVA 233
Query: 687 RDIKEKLCYVAS 722
R +KE CY S
Sbjct: 234 RKVKEMYCYTCS 245
Score = 35.9 bits (79), Expect = 0.029
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 83 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 169
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 89.4 bits (212), Expect = 2e-18
Identities = 42/104 (40%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Frame = +1
Query: 244 QKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 423
++ ++ + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 424 QIMFETFNTPAMYVAIQAVLSLYASGRTT---VSC-WTPATVSP 543
++MFE + PA+++A VL+ +A+GR T V C T+SP
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISP 188
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 172
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 513 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 617
+V+D G G + P+++GY L A++ L G L
Sbjct: 175 LVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFL 209
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 71.7 bits (168), Expect = 5e-13
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 271 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 447
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 448 TPAMYVAIQAVLSLYASGR 504
Y + QAVLSLYA GR
Sbjct: 117 VSGFYASEQAVLSLYAVGR 135
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.1 bits (144), Expect = 4e-10
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +1
Query: 271 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 417
P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 88 PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ + + E+ ++
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 251 G 253
G
Sbjct: 65 G 65
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 441
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 442 FNTPAMYVA-IQAVLSLYASGR 504
F ++Y+A Q+++ LY + R
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASR 142
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/97 (29%), Positives = 49/97 (50%)
Frame = +3
Query: 429 HVRNIQHARHVRRHPSRALAVRVRSYHGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 608
H +++ H R P L+ ++ +V+D G +H VP+ + L HAI R+DL G
Sbjct: 130 HPQSLVHLYEASRQPDSILS---KTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGG 186
Query: 609 RDLQTTS*RSSPSAALVHYHRQREIVRDIKEKLCYVA 719
+ T + S ++ + +V D KEKLC+V+
Sbjct: 187 KAF-TNYLKELVSYRSINVMDETFLVDDAKEKLCFVS 222
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 86 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 178
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Frame = +1
Query: 271 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 447
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 448 TPAMYVAIQAVLSLYASGRTTVSCWTPATVSPTPCPSTKDTHS 576
PA+ + A S Y + C V CP THS
Sbjct: 145 VPAVAFGVDAAFS-YKYNQLHGICKKDGIVL---CPGFTTTHS 183
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +2
Query: 86 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 232
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 207 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 70
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +1
Query: 241 EQKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 417
E +YL++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +1
Query: 241 EQKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 417
E +YL++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Frame = +1
Query: 328 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 477
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 478 VLSLYASGRTT 510
VL+LYA+ RT+
Sbjct: 241 VLALYAARRTS 251
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Frame = +1
Query: 328 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 477
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 478 VLSLYASGRTT 510
VL+LYA+ RT+
Sbjct: 241 VLALYAARRTS 251
>At3g18690.1 68416.m02374 VQ motif-containing protein contains
PF05678: VQ motif
Length = 222
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 563 RIRTPPRHPASGLSRSRPPDYL 628
+I+ PP+HPA +R +PP Y+
Sbjct: 40 KIKKPPKHPAPPPNRDQPPPYI 61
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 384 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRALAVRVRSY 506
GSP+ +G + E+D D + NI+H + +H + A+ SY
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLYGKMSY 134
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 523 TPATVSPTPCPSTKDTHSPTPSCVWT*PVATSRLPHEDPHRA 648
TP+T SP P K PTP + P T +PH P ++
Sbjct: 84 TPSTPSPPPPAPKKSPPPPTPKKSPSPPSLTPFVPHPTPKKS 125
>At2g20960.1 68415.m02479 expressed protein pEARLI 4 gene product
[Arabidopsis thaliana] GI:871782
Length = 748
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +2
Query: 473 KPCSRCTRPVVPRYRAGL---RRRCLPHRAHL--RRIRTPPRHPASGLSRSRPPDYLMKI 637
+P + TRP P +R+ + R R H + RR +TP P + R R P+++ +
Sbjct: 250 RPQTPETRPRTPEHRSAIPDTRPRTPIHESAATGRRPQTPETRPRTAQRRGRSPEFMERS 309
Query: 638 LTERGSRSLPPP 673
R P P
Sbjct: 310 PGPRSKTPEPQP 321
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +2
Query: 563 RIRTPPRHPASGLSRSRPPDYLMKILTERGSRSLPPPAGNRS 688
R R+PPR+ S SR PD + L + GSRS P +RS
Sbjct: 476 RRRSPPRYNRRRRSTSRSPDGYRRRLRD-GSRSQSPRHRSRS 516
>At1g17460.1 68414.m02141 myb family transcription factor contains
Pfam PF00249: Myb-like DNA-binding domain
Length = 604
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 539 LPHRAHLRRIRTPPRHPASGLSRSRPPDYLMKILTERGSRSLPPP 673
+P+ +H+RR R PR L R + +K E G+ +L PP
Sbjct: 383 VPYVSHVRRSR--PRENIMALGEFRSKSWEVKAAPEEGNLNLSPP 425
>At5g29020.1 68418.m03592 hypothetical protein
Length = 847
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 461 TSPSKPCSRCTRPVVPRY-RAGLRRRCLPHRAHLRRIRTPPRHPASGL 601
++P+KPC T PV P Y G R+R P + R + P P+ L
Sbjct: 26 SNPAKPCGSRTLPVNPPYPTTGKRKRADPPKPS-RGLSPNPTDPSGVL 72
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +1
Query: 538 SPTPCPSTKDTHSPTPSCVWT*PVATSRLPHEDPHRARLSFTTTASGKS 684
SPTP PST +PTPS P ++ P P + + +T A+GK+
Sbjct: 278 SPTPTPSTPTPSTPTPST----PTPSTPTP-STPTPSTPAPSTPAAGKT 321
>At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C2H2
type) family protein identical to superman protein
GB:S60325 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +2
Query: 452 PPCTSPSKPCSRCTRPVVPRYRAGLRRRCLPHRAH 556
PP SP + P PRYRAGL R P H
Sbjct: 107 PPHHSPLTLFPTLSPPSSPRYRAGLIRSLSPKSKH 141
>At2g28440.1 68415.m03455 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420; +
Length = 268
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 523 TPATVSPTPCPSTKDTHSPTPSCVWT*PVATSRLPHED 636
+PA VSP PST SP+ S P++ S P ED
Sbjct: 29 SPAAVSPGREPSTDSPLSPSSSPEEDSPLSPSSSPEED 66
>At1g76110.1 68414.m08838 high mobility group (HMG1/2) family
protein / ARID/BRIGHT DNA-binding domain-containing
protein low similarity to high mobility group protein
[Plasmodium falciparum] GI:790198; contains Pfam
profiles PF00505: HMG (high mobility group) box,
PF01388: ARID/BRIGHT DNA binding domain
Length = 338
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 440 HSTRP-PCTSPSKPCSRCTRPVVPRYRAGLRRRCLPHRAHLRRIRTPPRHP 589
HS +P P +SP+ + VVP G RRR L R RR R P +P
Sbjct: 209 HSAQPGPSSSPTAVLNNA---VVPYVETGRRRRRLGKRRRSRR-REDPNYP 255
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,717,564
Number of Sequences: 28952
Number of extensions: 462978
Number of successful extensions: 1638
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1593
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1702303248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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