Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1353
         (713 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7RFT5 Cluster: Predicted protein; n=1; Nematostella ve...    35   1.7  
UniRef50_O57904 Cluster: Putative uncharacterized protein PH0165...    33   7.0  

>UniRef50_A7RFT5 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 247

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +2

Query: 275 WMGYVFASFLWCSALFMFLMQMSKLSF 355
           W  YV+  +LW S+ FMF+M++S LS+
Sbjct: 127 WNEYVYRDYLWQSSRFMFIMRLSILSY 153


>UniRef50_O57904 Cluster: Putative uncharacterized protein PH0165;
           n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized
           protein PH0165 - Pyrococcus horikoshii
          Length = 291

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -3

Query: 507 NCDRFFFFKLTDIWIHVCHVH 445
           NC +FF  KL ++WIHVC  +
Sbjct: 96  NCGKFFNKKLNNVWIHVCSTY 116


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,609,267
Number of Sequences: 1657284
Number of extensions: 11475195
Number of successful extensions: 27548
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 26696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27545
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)