Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1353
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.1  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    24   1.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    24   1.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   1.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.5  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -1

Query: 473 IFGYMYVTCTR-RLKSIGAEVIIELTFQVLVIALL 372
           IFG++  TCTR   +S    ++  +  QVL ++ +
Sbjct: 23  IFGFVTFTCTRSNFRSSKLLILYNIILQVLFVSFV 57


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -1

Query: 473 IFGYMYVTCTR-RLKSIGAEVIIELTFQVLVIALL 372
           IFG++  TCTR   +S    ++  +  QVL ++ +
Sbjct: 41  IFGFVTFTCTRSNFRSSKLLILYNIILQVLFVSFV 75


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 504 N*PIDIDNIDLYQLITSCNK 563
           N  ++IDNIDLY+ I + N+
Sbjct: 199 NGAVNIDNIDLYEEIFNGNR 218


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +3

Query: 504 N*PIDIDNIDLYQLITSCNK 563
           N  +++DNIDLY+ I + N+
Sbjct: 192 NGAVNVDNIDLYEEIFNGNR 211


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +3

Query: 243 NIWAQFTINGIGWDTFLQAFC 305
           N WA  T +   W+ F+   C
Sbjct: 523 NPWANCTASTRCWEVFMDGIC 543


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,755
Number of Sequences: 336
Number of extensions: 3357
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)