Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1353
         (713 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68880-5|CAA93094.1|  181|Caenorhabditis elegans Hypothetical pr...    31   0.82 
CU457740-9|CAM36339.1|  357|Caenorhabditis elegans Hypothetical ...    29   4.4  

>Z68880-5|CAA93094.1|  181|Caenorhabditis elegans Hypothetical
           protein T14G10.8 protein.
          Length = 181

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = -1

Query: 344 LTSASKT*RVLNTTKSLQKRIPSNSIYGELSPN 246
           +T A +  R L++ + LQKR+ + S+ GELSP+
Sbjct: 128 VTEADEAMRTLSSHRELQKRLQNMSMRGELSPS 160


>CU457740-9|CAM36339.1|  357|Caenorhabditis elegans Hypothetical
           protein C50E10.9 protein.
          Length = 357

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +1

Query: 106 FQLYEELKSI*TKLMLILHNNCVVVRCQGCFVSVLVEYWFRIKYFEIFG 252
           FQ  E LKS+     ++  +   V  C+ CF+ V   Y     Y+E+FG
Sbjct: 238 FQTMENLKSLRMAKYVVSTHAVYVSLCEVCFICVY--YGAESNYWEVFG 284


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,890,429
Number of Sequences: 27780
Number of extensions: 291280
Number of successful extensions: 783
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)