Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1353
         (713 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g19650.1 68414.m02449 SEC14 cytosolic factor, putative / phos...    28   5.3  
At2g43480.1 68415.m05403 peroxidase, putative similar to peroxid...    28   7.1  

>At1g19650.1 68414.m02449 SEC14 cytosolic factor, putative /
           phosphoglyceride transfer protein, putative similar to
           SP:P24859 from [Kluyveromyces lactissimilar to
           phosphatidylinositol transfer-like protein IV
           (GI:14486707) [Lotus japonicus]; contains Pfam PF00650 :
           CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO,
           N-terminus
          Length = 608

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 233 STLKYLGSIHHKWNWMGYVFASF 301
           S+L  +GS+ H W+W+   F SF
Sbjct: 452 SSLGKIGSVRHIWSWLTAFFISF 474


>At2g43480.1 68415.m05403 peroxidase, putative similar to
           peroxidase; peroxidase ATP14a [Arabidopsis thaliana]
           gi|1546690|emb|CAA67335
          Length = 335

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 20/62 (32%), Positives = 34/62 (54%)
 Frame = +1

Query: 31  KIC*YFSRKKSTKQNMEIFSWFTLFFQLYEELKSI*TKLMLILHNNCVVVRCQGCFVSVL 210
           K+  ++ +  +T +N E F    +    Y+  KSI  KL+ +L+++C V    GC  SVL
Sbjct: 34  KLTWHYYKVYNTCENAENFVRHQVEI-FYKNDKSIAPKLLRLLYSDCFV---SGCDASVL 89

Query: 211 VE 216
           +E
Sbjct: 90  LE 91


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,515,062
Number of Sequences: 28952
Number of extensions: 250066
Number of successful extensions: 588
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)