BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1352
(204 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ974162-1|ABJ52802.1| 418|Anopheles gambiae serpin 3 protein. 21 5.3
DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein. 21 5.3
M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles ... 21 7.0
AY146739-1|AAO12099.1| 176|Anopheles gambiae odorant-binding pr... 21 7.0
DQ974174-1|ABJ52814.1| 391|Anopheles gambiae serpin 18 protein. 20 9.2
>DQ974162-1|ABJ52802.1| 418|Anopheles gambiae serpin 3 protein.
Length = 418
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -2
Query: 41 TDGTLLFTIL 12
T+GTL+FTIL
Sbjct: 374 TEGTLVFTIL 383
>DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein.
Length = 847
Score = 21.0 bits (42), Expect = 5.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 34 PSVFSKTYVTPRRPFEKARLDQEL 105
P+ +T +P + FE+ L QEL
Sbjct: 490 PTRVPQTRTSPGKVFERCELAQEL 513
>M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 442
Score = 20.6 bits (41), Expect = 7.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 147 YFTLVAETVLSDDLQLLVKTCL 82
YFT + V +DD+++ +K L
Sbjct: 257 YFTNIKSHVSADDMRVWLKAVL 278
>AY146739-1|AAO12099.1| 176|Anopheles gambiae odorant-binding
protein AgamOBP29 protein.
Length = 176
Score = 20.6 bits (41), Expect = 7.0
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = -1
Query: 117 SDDLQLLVKTCLFKRT 70
+DD++ +V+TC+ K T
Sbjct: 49 ADDVKRIVRTCMNKIT 64
>DQ974174-1|ABJ52814.1| 391|Anopheles gambiae serpin 18 protein.
Length = 391
Score = 20.2 bits (40), Expect = 9.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -1
Query: 198 ELTSSLTDTSERVFDAPYFTLVAETVLSDDL 106
E T L ER+F + T V L+DD+
Sbjct: 113 EETLRLDSEFERLFHRTFQTTVEPVDLTDDI 143
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,841
Number of Sequences: 2352
Number of extensions: 2997
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 45
effective length of database: 458,139
effective search space used: 10079058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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