Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1352
         (204 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69302-5|CAA93262.1|  189|Caenorhabditis elegans Hypothetical pr...    96   3e-21
U64847-11|AAB04878.2|  151|Caenorhabditis elegans Hypothetical p...    27   2.4  
AL032639-7|CAA21631.2|  465|Caenorhabditis elegans Hypothetical ...    27   2.4  
L08403-1|AAA28025.1|  810|Caenorhabditis elegans Hypothetical pr...    26   3.2  
Z48795-7|CAA88731.1|  347|Caenorhabditis elegans Hypothetical pr...    25   5.6  
AF125952-2|AAD14700.1|  478|Caenorhabditis elegans Hypothetical ...    25   5.6  
AC006722-8|AAK68418.2|  478|Caenorhabditis elegans Hypothetical ...    25   5.6  

>Z69302-5|CAA93262.1|  189|Caenorhabditis elegans Hypothetical
           protein F40F8.10 protein.
          Length = 189

 Score = 95.9 bits (228), Expect = 3e-21
 Identities = 44/59 (74%), Positives = 52/59 (88%)
 Frame = +1

Query: 28  RVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLT 204
           R+ +V SK   +PRRPFEK RLDQELK+IG +GL+NKREVWRVKYTLA++RKAARELLT
Sbjct: 3   RLKTVQSKVTKSPRRPFEKERLDQELKLIGTFGLKNKREVWRVKYTLAKVRKAARELLT 61


>U64847-11|AAB04878.2|  151|Caenorhabditis elegans Hypothetical
           protein F08F3.1 protein.
          Length = 151

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 31  VPSVFSKTYVTPRRPFEKARLDQELKI 111
           VP   ++T VTP RP EK +  ++++I
Sbjct: 74  VPVFHNETTVTPERPIEKKKRVRQIQI 100


>AL032639-7|CAA21631.2|  465|Caenorhabditis elegans Hypothetical
           protein Y38F1A.6 protein.
          Length = 465

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 139 ACCGDRTLR*SSTLGQDVPFQKDDE-VSRT 53
           A C DR L  + TLG D+P    +E +SRT
Sbjct: 371 AACPDRHLISAQTLGADIPNNASNEYISRT 400


>L08403-1|AAA28025.1|  810|Caenorhabditis elegans Hypothetical
           protein F42H10.5 protein.
          Length = 810

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 189 SSLTDTSERVFDAPYFTLVAETVLS 115
           S L+D +  +   P FTL AE VLS
Sbjct: 745 SELSDLATELLSIPIFTLTAERVLS 769


>Z48795-7|CAA88731.1|  347|Caenorhabditis elegans Hypothetical
           protein R05H5.1 protein.
          Length = 347

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -2

Query: 62  VTYVFENTDGTLLFTIL 12
           + YVF+N+D  LLF IL
Sbjct: 160 LVYVFDNSDSDLLFQIL 176


>AF125952-2|AAD14700.1|  478|Caenorhabditis elegans Hypothetical
          protein C01B4.8 protein.
          Length = 478

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 79 QKDDEVSRTSLKIPTVLCCS 20
          +K DE+S  S K   +LCC+
Sbjct: 12 EKSDEMSENSRKTSKILCCN 31


>AC006722-8|AAK68418.2|  478|Caenorhabditis elegans Hypothetical
          protein Y19D10A.5 protein.
          Length = 478

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 79 QKDDEVSRTSLKIPTVLCCS 20
          +K DE+S  S K   +LCC+
Sbjct: 12 EKSDEMSENSRKTSKILCCN 31


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,159,182
Number of Sequences: 27780
Number of extensions: 65102
Number of successful extensions: 195
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 12,740,198
effective HSP length: 47
effective length of database: 11,434,538
effective search space used: 228690760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)