Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1352
(204 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 0.36
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 0.36
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 0.36
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 0.36
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 20 3.4
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 20 3.4
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 20 3.4
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 19 4.5
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 19 4.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 19 4.5
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 19 5.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 19 5.9
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 19 5.9
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 19 5.9
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 19 5.9
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 19 5.9
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 19 5.9
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 19 5.9
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 19 5.9
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 19 7.8
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 19 7.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 19 7.8
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 19 7.8
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 19 7.8
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 19 7.8
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 19 7.8
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 19 7.8
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 19 7.8
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 19 7.8
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 19 7.8
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.0 bits (47), Expect = 0.36
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -2
Query: 101 SWSRRAFSKGRRGVTYVFENTDGTL 27
S++ + S + +TYV++N +GTL
Sbjct: 201 SFAIESISYEQTAITYVWKNDEGTL 225
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.0 bits (47), Expect = 0.36
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -2
Query: 101 SWSRRAFSKGRRGVTYVFENTDGTL 27
S++ + S + +TYV++N +GTL
Sbjct: 201 SFAIESISYEQTAITYVWKNDEGTL 225
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.0 bits (47), Expect = 0.36
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -2
Query: 101 SWSRRAFSKGRRGVTYVFENTDGTL 27
S++ + S + +TYV++N +GTL
Sbjct: 252 SFAIESISYEQTAITYVWKNDEGTL 276
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.0 bits (47), Expect = 0.36
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -2
Query: 101 SWSRRAFSKGRRGVTYVFENTDGTL 27
S++ + S + +TYV++N +GTL
Sbjct: 201 SFAIESISYEQTAITYVWKNDEGTL 225
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 19.8 bits (39), Expect = 3.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 4 ELAKMVNNRVPSVFSKT 54
EL V+ +P+VF+KT
Sbjct: 311 ELLTPVSTMLPAVFAKT 327
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 19.8 bits (39), Expect = 3.4
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = -2
Query: 125 PYSPMIFNSW 96
PY +++NSW
Sbjct: 467 PYDHLVWNSW 476
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 19.8 bits (39), Expect = 3.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 4 ELAKMVNNRVPSVFSKT 54
EL V+ +P+VF+KT
Sbjct: 311 ELLTPVSTMLPAVFAKT 327
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 19.4 bits (38), Expect = 4.5
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 55 YVTPRRPFEKARLDQELKIIGEYGLR 132
Y+ +RP + RL + GEY R
Sbjct: 89 YLKTKRPKDWERLSAKYDSTGEYKKR 114
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 19.4 bits (38), Expect = 4.5
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 55 YVTPRRPFEKARLDQELKIIGEYGLR 132
Y+ +RP + RL + GEY R
Sbjct: 89 YLKTKRPKDWERLSAKYDSTGEYKKR 114
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 19.4 bits (38), Expect = 4.5
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +3
Query: 21 EQQSTVGIFKDVRDTSSSF*KGTS*PRVEDHRRV 122
++ T G KDV T G+ P +++H V
Sbjct: 485 QETRTPGFGKDVLATDERSFSGSRNPLLQEHDSV 518
Score = 18.6 bits (36), Expect = 7.8
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 97 GQDVPFQKDDEVSRTS 50
G K +EVSRTS
Sbjct: 709 GDSFKVSKHEEVSRTS 724
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 19.0 bits (37), Expect = 5.9
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = -2
Query: 101 SWSRRAFSKGRRGVTYVFENTDGTL 27
SW R + G GV + N D ++
Sbjct: 2 SWQRVFLAVGLFGVLLLLTNADNSV 26
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.0 bits (37), Expect = 5.9
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 81 FKRTTRCHVR 52
F+RT+ CH R
Sbjct: 224 FQRTSSCHSR 233
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.0 bits (37), Expect = 5.9
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 81 FKRTTRCHVR 52
F+RT+ CH R
Sbjct: 224 FQRTSSCHSR 233
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.0 bits (37), Expect = 5.9
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 81 FKRTTRCHVR 52
F+RT+ CH R
Sbjct: 224 FQRTSSCHSR 233
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.0 bits (37), Expect = 5.9
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 81 FKRTTRCHVR 52
F+RT+ CH R
Sbjct: 224 FQRTSSCHSR 233
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.0 bits (37), Expect = 5.9
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 81 FKRTTRCHVR 52
F+RT+ CH R
Sbjct: 224 FQRTSSCHSR 233
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.0 bits (37), Expect = 5.9
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 81 FKRTTRCHVR 52
F+RT+ CH R
Sbjct: 224 FQRTSSCHSR 233
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 19.0 bits (37), Expect = 5.9
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 81 FKRTTRCHVR 52
F+RT+ CH R
Sbjct: 224 FQRTSSCHSR 233
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 19.0 bits (37), Expect = 5.9
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 81 FKRTTRCHVR 52
F+RT+ CH R
Sbjct: 224 FQRTSSCHSR 233
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 18.6 bits (36), Expect = 7.8
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +1
Query: 118 EYGLRNKREVWRVK 159
E L+++REVW ++
Sbjct: 33 EERLQHRREVWLIQ 46
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 18.6 bits (36), Expect = 7.8
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +1
Query: 118 EYGLRNKREVWRVK 159
E L+++REVW ++
Sbjct: 33 EERLQHRREVWLIQ 46
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 18.6 bits (36), Expect = 7.8
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +1
Query: 118 EYGLRNKREVWRVK 159
E L+++REVW ++
Sbjct: 33 EERLQHRREVWLIQ 46
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 18.6 bits (36), Expect = 7.8
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +1
Query: 118 EYGLRNKREVWRVK 159
E L+++REVW ++
Sbjct: 33 EERLQHRREVWLIQ 46
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 18.6 bits (36), Expect = 7.8
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +1
Query: 118 EYGLRNKREVWRVK 159
E L+++REVW ++
Sbjct: 33 EERLQHRREVWLIQ 46
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 18.6 bits (36), Expect = 7.8
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +1
Query: 118 EYGLRNKREVWRVK 159
E L+++REVW ++
Sbjct: 33 EERLQHRREVWLIQ 46
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 18.6 bits (36), Expect = 7.8
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +1
Query: 118 EYGLRNKREVWRVK 159
E L+++REVW ++
Sbjct: 33 EERLQHRREVWLIQ 46
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 18.6 bits (36), Expect = 7.8
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +1
Query: 118 EYGLRNKREVWRVK 159
E L+++REVW ++
Sbjct: 33 EERLQHRREVWLIQ 46
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 18.6 bits (36), Expect = 7.8
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 131 RRPYSPMIFNSWSRR 87
+RP +F SWS R
Sbjct: 663 KRPDLLHLFGSWSNR 677
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 18.6 bits (36), Expect = 7.8
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 131 RRPYSPMIFNSWSRR 87
+RP +F SWS R
Sbjct: 663 KRPDLLHLFGSWSNR 677
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 18.6 bits (36), Expect = 7.8
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 131 RRPYSPMIFNSWSRR 87
+RP +F SWS R
Sbjct: 663 KRPDLLHLFGSWSNR 677
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,255
Number of Sequences: 438
Number of extensions: 852
Number of successful extensions: 50
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used: 2785926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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