Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1351
         (841 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    31   0.058
AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.    27   0.54 
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    27   0.94 
AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14...    25   2.9  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   3.8  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 30.7 bits (66), Expect = 0.058
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = +1

Query: 25  KSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAK- 201
           + E+ A+ +D+   +R  +   EH+IRN E   +K  S  D  +A  E    + VA+ + 
Sbjct: 324 QEEQLAAVDDELKKLRTSIEEQEHRIRNREALVAKTDSTIDTYRADIESKKQEYVALKEA 383

Query: 202 YDEVAQTLE 228
           Y  V +TL+
Sbjct: 384 YGTVRRTLQ 392


>AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.
          Length = 144

 Score = 27.5 bits (58), Expect = 0.54
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
 Frame = +2

Query: 590 VLGTTYLRIK---EIVSTVHECGYFDKTVDGAIAEVERKSCSSRRRSALNKVNMNPEVDY 760
           VLGTTY ++    E+V  +   G+    +   I  ++ +S      SALNK N N   DY
Sbjct: 12  VLGTTYGKVFNKCELVRLLAANGFPRSQLQDWICLIQNESRYDT--SALNKKNWNGSKDY 69

Query: 761 ASWSCIFTYW 790
             +     YW
Sbjct: 70  GIFQINNYYW 79


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 26.6 bits (56), Expect = 0.94
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 441  TEDDLKILDDLYPEVTPKHELNEKDNL 521
            T+ +LKILDD+ PE+T +   ++   L
Sbjct: 1029 TKRELKILDDIMPEMTKRARADDLHQL 1055


>AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14D2
           protein.
          Length = 372

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +2

Query: 659 KTVDGAIAE-VERKSCSSRRRSALNKVNMNPE 751
           +T DG +   V  +SC S R   L K NM PE
Sbjct: 33  ETPDGKVGTCVYLRSCLSIRNVLLKKENMTPE 64


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
 Frame = +1

Query: 139 YRDLQKAGKELNSDQKVAVA------KYDEVAQTLEFARD 240
           +  L  AG+EL+S  KVA+        YD +  TLE   D
Sbjct: 125 FSSLMNAGQELDSSLKVAMVLKSMPESYDHLTTTLETRSD 164


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,655
Number of Sequences: 2352
Number of extensions: 12740
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)