Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1351
(841 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117673-1|AAI17674.1| 905|Homo sapiens CAPRIN2 protein protein. 67 9e-11
BC117672-1|AAI17673.1| 960|Homo sapiens CAPRIN2 protein protein. 67 9e-11
AY074491-1|AAL71550.1| 278|Homo sapiens EEG1S protein. 67 9e-11
AY074490-1|AAL71549.1| 1077|Homo sapiens EEG1L protein. 67 9e-11
BC001731-1|AAH01731.2| 709|Homo sapiens cell cycle associated p... 66 1e-10
Z48042-1|CAA88096.1| 649|Homo sapiens GPI-anchored protein p137... 64 5e-10
BX537569-1|CAD97786.1| 173|Homo sapiens hypothetical protein pr... 64 5e-10
BC011885-1|AAH11885.1| 585|Homo sapiens eukaryotic translation ... 30 9.1
AK027356-1|BAB55058.1| 585|Homo sapiens protein ( Homo sapiens ... 30 9.1
AF497978-1|AAM83402.1| 585|Homo sapiens eukaryotic translation ... 30 9.1
AF212241-1|AAK14926.1| 609|Homo sapiens CDA02 protein. 30 9.1
>BC117673-1|AAI17674.1| 905|Homo sapiens CAPRIN2 protein protein.
Length = 905
Score = 66.9 bits (156), Expect = 9e-11
Identities = 32/71 (45%), Positives = 46/71 (64%)
Frame = +1
Query: 28 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 207
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 208 EVAQTLEFARD 240
EV LEFA++
Sbjct: 169 EVLHNLEFAKE 179
Score = 37.5 bits (83), Expect = 0.060
Identities = 13/42 (30%), Positives = 29/42 (69%)
Frame = +2
Query: 533 QITRAAEHLYSIIDGKPKEVLGTTYLRIKEIVSTVHECGYFD 658
Q+ +++ + + +++G K V+GTTY +K+++S + GYF+
Sbjct: 274 QMEQSSLYFWDLLEGSEKAVVGTTYKHLKDLLSKLLNSGYFE 315
>BC117672-1|AAI17673.1| 960|Homo sapiens CAPRIN2 protein protein.
Length = 960
Score = 66.9 bits (156), Expect = 9e-11
Identities = 32/71 (45%), Positives = 46/71 (64%)
Frame = +1
Query: 28 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 207
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 208 EVAQTLEFARD 240
EV LEFA++
Sbjct: 169 EVLHNLEFAKE 179
Score = 37.5 bits (83), Expect = 0.060
Identities = 13/42 (30%), Positives = 29/42 (69%)
Frame = +2
Query: 533 QITRAAEHLYSIIDGKPKEVLGTTYLRIKEIVSTVHECGYFD 658
Q+ +++ + + +++G K V+GTTY +K+++S + GYF+
Sbjct: 274 QMEQSSLYFWDLLEGSEKAVVGTTYKHLKDLLSKLLNSGYFE 315
>AY074491-1|AAL71550.1| 278|Homo sapiens EEG1S protein.
Length = 278
Score = 66.9 bits (156), Expect = 9e-11
Identities = 32/71 (45%), Positives = 46/71 (64%)
Frame = +1
Query: 28 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 207
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 208 EVAQTLEFARD 240
EV LEFA++
Sbjct: 169 EVLHNLEFAKE 179
>AY074490-1|AAL71549.1| 1077|Homo sapiens EEG1L protein.
Length = 1077
Score = 66.9 bits (156), Expect = 9e-11
Identities = 32/71 (45%), Positives = 46/71 (64%)
Frame = +1
Query: 28 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 207
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 208 EVAQTLEFARD 240
EV LEFA++
Sbjct: 169 EVLHNLEFAKE 179
Score = 37.5 bits (83), Expect = 0.060
Identities = 13/42 (30%), Positives = 29/42 (69%)
Frame = +2
Query: 533 QITRAAEHLYSIIDGKPKEVLGTTYLRIKEIVSTVHECGYFD 658
Q+ +++ + + +++G K V+GTTY +K+++S + GYF+
Sbjct: 274 QMEQSSLYFWDLLEGSEKAVVGTTYKHLKDLLSKLLNSGYFE 315
>BC001731-1|AAH01731.2| 709|Homo sapiens cell cycle associated
protein 1 protein.
Length = 709
Score = 66.1 bits (154), Expect = 1e-10
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = +1
Query: 13 AANAKSEKPASSED--KDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQK 186
AA S+ PA+ + ++QI+ +I+ K+RNLEK+K KL Y++ G+ LN DQ
Sbjct: 34 AAAPASQHPATGTGAVQTEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQL 93
Query: 187 VAVAKYDEVAQTLEFARD 240
AV+KY EV LEFA++
Sbjct: 94 DAVSKYQEVTNNLEFAKE 111
Score = 48.0 bits (109), Expect = 4e-05
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +2
Query: 533 QITRAAEHLYSIIDGKPKEVLGTTYLRIKEIVSTVHECGYFDKTVD--GAIAEVERKSCS 706
Q A+ HL+ +++GK K V GTTY +KEIV V + YFD T + + E E + +
Sbjct: 206 QYEHASIHLWDLLEGKEKPVCGTTYKVLKEIVERVFQSNYFDSTHNHQNGLCEEEEAASA 265
Query: 707 SRRRSALNKVNMNPEVDYASWS 772
+ + P +Y S
Sbjct: 266 PAVEDQVPEAEPEPAEEYTEQS 287
Score = 47.6 bits (108), Expect = 6e-05
Identities = 23/68 (33%), Positives = 40/68 (58%)
Frame = +3
Query: 315 VRYAAETNKIKEVLLILDCLMQMGSADARTDFINGTNGAAKLTEDDLKILDDLYPEVTPK 494
+R AE ++K VL + L ++G + RTD G NG L+E++L +LD+ Y V P+
Sbjct: 137 MREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSEEELSLLDEFYKLVDPE 196
Query: 495 HELNEKDN 518
+++ + N
Sbjct: 197 RDMSLRLN 204
>Z48042-1|CAA88096.1| 649|Homo sapiens GPI-anchored protein p137
protein.
Length = 649
Score = 64.5 bits (150), Expect = 5e-10
Identities = 28/58 (48%), Positives = 41/58 (70%)
Frame = +1
Query: 67 IRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARD 240
++QI+ +I+ K+RNLEK+K KL Y++ G+ LN DQ AV+KY EV LEFA++
Sbjct: 1 MKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKE 58
Score = 47.6 bits (108), Expect = 6e-05
Identities = 23/68 (33%), Positives = 40/68 (58%)
Frame = +3
Query: 315 VRYAAETNKIKEVLLILDCLMQMGSADARTDFINGTNGAAKLTEDDLKILDDLYPEVTPK 494
+R AE ++K VL + L ++G + RTD G NG L+E++L +LD+ Y V P+
Sbjct: 84 MREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSEEELSLLDEFYKLVDPE 143
Query: 495 HELNEKDN 518
+++ + N
Sbjct: 144 RDMSLRLN 151
Score = 47.6 bits (108), Expect = 6e-05
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 533 QITRAAEHLYSIIDGKPKEVLGTTYLRIKEIVSTVHECGYFDKTVD--GAIAEVERKSCS 706
Q A+ HL+ +++GK K V GTTY +KEIV V + YFD T + + E E +
Sbjct: 153 QYEHASIHLWDLLEGKEKPVCGTTYKVLKEIVERVFQSNYFDSTHNHQNGLCEEEEADSA 212
Query: 707 SRRRSALNKVNMNPEVDYASWS 772
+ + P +Y S
Sbjct: 213 PAVEDQVPEAEPEPAEEYTEQS 234
>BX537569-1|CAD97786.1| 173|Homo sapiens hypothetical protein
protein.
Length = 173
Score = 64.5 bits (150), Expect = 5e-10
Identities = 31/71 (43%), Positives = 45/71 (63%)
Frame = +1
Query: 28 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 207
S + S+ + I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 74 SSAASPSQAYEAYIENGLICLKHKIRNIEKKKLKLEDYKDHLKSGEHLNPDQLEAVEKYE 133
Query: 208 EVAQTLEFARD 240
EV LEFA++
Sbjct: 134 EVLHNLEFAKE 144
>BC011885-1|AAH11885.1| 585|Homo sapiens eukaryotic translation
initiation factor 2A, 65kDa protein.
Length = 585
Score = 30.3 bits (65), Expect = 9.1
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 88 IEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLE 228
I+ KI+NL+K+ + ++ GK+L +Q + K + Q LE
Sbjct: 533 IDKKIKNLKKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELE 579
>AK027356-1|BAB55058.1| 585|Homo sapiens protein ( Homo sapiens
cDNA FLJ14450 fis, clone HEMBB1001736, weakly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 9. ).
Length = 585
Score = 30.3 bits (65), Expect = 9.1
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 88 IEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLE 228
I+ KI+NL+K+ + ++ GK+L +Q + K + Q LE
Sbjct: 533 IDKKIKNLKKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELE 579
>AF497978-1|AAM83402.1| 585|Homo sapiens eukaryotic translation
initiation factor 2A protein.
Length = 585
Score = 30.3 bits (65), Expect = 9.1
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 88 IEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLE 228
I+ KI+NL+K+ + ++ GK+L +Q + K + Q LE
Sbjct: 533 IDKKIKNLKKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELE 579
>AF212241-1|AAK14926.1| 609|Homo sapiens CDA02 protein.
Length = 609
Score = 30.3 bits (65), Expect = 9.1
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 88 IEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLE 228
I+ KI+NL+K+ + ++ GK+L +Q + K + Q LE
Sbjct: 557 IDKKIKNLKKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELE 603
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,129,086
Number of Sequences: 237096
Number of extensions: 2057310
Number of successful extensions: 4198
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4190
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -