Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1350
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   3.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.2  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    21   7.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.8  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 108 LAYSQYRQTFTSMKENIEEYI 170
           LAY + RQ F + K+NI E+I
Sbjct: 284 LAY-KIRQVFPNEKKNISEFI 303


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 496 SV*RHTGSFLGKEGKDFEFSHIRNKVEFA 582
           S+  HT S +  +G DF  + + + V +A
Sbjct: 297 SIDNHTLSVISTDGSDFNATEVDSLVTYA 325


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 631 PLQEWISEALDWNYHYY 681
           PL      A+D+NY+YY
Sbjct: 51  PLALSNKNAIDFNYYYY 67


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 383 CNKQDQPLAKGSQVIKGLLEKEINLVRVTKSNQLQSVDPSEGTPGR 520
           C K      + S+ ++GLLE     +++    Q  + +  +  PGR
Sbjct: 734 CPKNRPTFTELSKSLEGLLENVAQYLQIENVEQTLNHEIKKVIPGR 779


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,856
Number of Sequences: 336
Number of extensions: 3482
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)