Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1350
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical pr... 68 8e-12
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 39 0.004
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 38 0.005
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 36 0.021
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 36 0.021
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 36 0.037
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 36 0.037
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 36 0.037
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 34 0.11
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF045646-8|AAK29830.1| 541|Caenorhabditis elegans Udp-glucurono... 30 1.4
Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.7
U61947-2|AAB03135.1| 498|Caenorhabditis elegans Hypothetical pr... 28 5.7
U53181-7|AAA93487.1| 472|Caenorhabditis elegans Hypothetical pr... 28 5.7
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 28 5.7
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 28 5.7
AC006619-3|AAK68253.1| 943|Caenorhabditis elegans Hypothetical ... 28 5.7
Z37093-6|CAJ85783.1| 176|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z37093-5|CAJ85782.1| 212|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81016-5|CAB02665.3| 640|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical
protein R186.3 protein.
Length = 240
Score = 67.7 bits (158), Expect = 8e-12
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +2
Query: 263 IVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQVIKGLLE 442
IVFV+DS K RDVAE YT+ + + + P+LI C+KQD LAK +VI+ LE
Sbjct: 117 IVFVVDSAAFSKNARDVAELFYTVALENV---DKVPILIACHKQDLSLAKTEKVIRNSLE 173
Query: 443 KEINLVRVTKSNQLQSVDPSE 505
KEI L+ +++ L D SE
Sbjct: 174 KEIGLINKSRAAALIGTDGSE 194
Score = 54.8 bits (126), Expect = 6e-08
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Frame = +3
Query: 48 RNSVLLMGLSDSGKTLLFVRLA-----YSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQ 212
+N VL +GL D GKT +F +L+ Y +T+TSM EN +K +I+D PG
Sbjct: 38 KNRVLFVGLMDCGKTTIFTQLSQKEAEYPTTTKTYTSMVENKITLRIKDKEKEIIDYPGN 97
Query: 213 ERLRNKFFEQHKSS 254
+RLR K E H S
Sbjct: 98 DRLRQKLIENHLHS 111
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +3
Query: 18 WWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIV 197
WWI ++Y ++++GL ++GKT + +T ++ N+EE N I
Sbjct: 12 WWI-GKKY----KIIVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVSYRNLDFVIW 66
Query: 198 DLPGQERLRNKF 233
D+ GQE LR +
Sbjct: 67 DIGGQESLRKSW 78
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/60 (35%), Positives = 37/60 (61%)
Frame = +2
Query: 263 IVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQVIKGLLE 442
+VFV+DS +I++ I + E L+++L +P + + LL+ NKQD P A+ + LL+
Sbjct: 88 LVFVVDSSDIER-IPEAKEELFSLLAEPELADSH--LLVFANKQDMPNARSPAELTQLLD 144
Score = 35.1 bits (77), Expect = 0.049
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +3
Query: 60 LLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLR 224
L++GL +GKT + +L ++ T ++ N+E TL + D+ GQ+++R
Sbjct: 21 LMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVETVTFQKITLTVWDVGGQKKIR 75
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 3 VTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQ-TFTSMKENIEEYITSN 179
V + WI S + + L+GL +SGKT +A Q+ + ++ N+ + N
Sbjct: 5 VNKVLDWIRSLFWKEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKGN 64
Query: 180 KTLKIVDLPGQERLRN 227
T+K+ D+ GQ R R+
Sbjct: 65 VTIKLWDIGGQPRFRS 80
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 57 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLR 224
+L++GL +GKT + RL + T ++ N+E+ N ++ DL GQ +R
Sbjct: 19 ILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVEYKNLKFQVWDLGGQTSIR 74
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 3 VTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQ-TFTSMKENIEEYITSN 179
V + WI S + + L+GL +SGKT +A Q+ + ++ N+ + N
Sbjct: 5 VNKVLDWIRSLFWKEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKGN 64
Query: 180 KTLKIVDLPGQERLRN 227
T+K+ D+ GQ R R+
Sbjct: 65 VTIKLWDIGGQPRFRS 80
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 35.5 bits (78), Expect = 0.037
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +3
Query: 24 IFSRRYTLRN-SVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVD 200
+F+R + R +L++GL +GKT + +L + T ++ N+E N + + D
Sbjct: 8 LFNRLFGKRQVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWD 67
Query: 201 LPGQERLR 224
+ GQ+++R
Sbjct: 68 VGGQDKIR 75
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 35.5 bits (78), Expect = 0.037
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +3
Query: 57 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLR 224
+L++GL +GKT + +L Q T ++ N+E N + D+ GQ+++R
Sbjct: 16 ILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNIKFNVWDVGGQDKIR 71
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 35.5 bits (78), Expect = 0.037
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +3
Query: 24 IFSRRYTLRN-SVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVD 200
+F+R + R +L++GL +GKT + +L + T ++ N+E N + + D
Sbjct: 8 LFNRLFGKRQVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWD 67
Query: 201 LPGQERLR 224
+ GQ+++R
Sbjct: 68 VGGQDKIR 75
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +3
Query: 57 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLR 224
+L++GL +GKT + +L + T ++ N+E N + + D+ GQ+++R
Sbjct: 20 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR 75
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 30.3 bits (65), Expect = 1.4
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Frame = +3
Query: 30 SRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQTFTS-MKENIEEYITS---NKTLKIV 197
S R +L V +MG GK+ L +R + + + + S +++ ++I + + L++
Sbjct: 7 SNRQSLNRKVAVMGYPHVGKSALVLRFTQNIFPERYESTIEDQHSKHIAAFHRDYHLRVT 66
Query: 198 DLPGQERLRNKFFEQHKSSLRELCL*LILSIYRKKS-EM*QNTYTQSCVIRSFRETQLP 371
D GQ+ F + SL L+ +I +KS EM N Y + ++R++ +T +P
Sbjct: 67 DTAGQQEY--TVFPR-SCSLDINGFILVYAIDDRKSFEMCSNIYEK--IVRTYGDTSIP 120
>AF045646-8|AAK29830.1| 541|Caenorhabditis elegans
Udp-glucuronosyltransferase protein52 protein.
Length = 541
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -1
Query: 426 ITWLPFANGWSCLLHNIRRGVVFP*MIGSHKIVYRYSATSLISFCILIESITNTI 262
+ W+ FA+ L N+ +IG + V+ Y +ISFCIL+ SI ++
Sbjct: 469 VEWIEFASRNPLLHRNLN-------LIGQNMSVFEYYCLDIISFCILLLSIVISV 516
>Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical
protein F59F3.5 protein.
Length = 1199
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 364 CVS--LNDRITQDCV*VFCYISDFFLYIDRINHKHNSLRLLLCCSKNLFL 221
CVS + + Q+ V +F D F+ + I H+HN +++ C F+
Sbjct: 107 CVSDEFKESMLQNTVHIFVRKLDIFVPLKTIYHEHNGSEIIIPCKTTKFV 156
>Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical
protein T24F1.1 protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.7
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 6/104 (5%)
Frame = +3
Query: 48 RNSVLLMGLSDSGKT----LLFVR-LAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQ 212
+ VLLMG S SGKT ++F +A R T E+ N L + D GQ
Sbjct: 4 KRKVLLMGKSGSGKTSMRSIIFANYIARDCSRLGPTIEVEHAHVKFLGNMVLHLWDCGGQ 63
Query: 213 ERLRNKFFEQHKSSLRELCL*LILSIYRKKSEM*QN-TYTQSCV 341
E F K + + LI + E ++ Y QSC+
Sbjct: 64 ESFMENFLVSQKDQIFKNVQVLIYVFDVESREFEKDLRYYQSCL 107
>U61947-2|AAB03135.1| 498|Caenorhabditis elegans Hypothetical
protein C06G3.6 protein.
Length = 498
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 508 HTGSFLGKEGKDFEFSHIRNKVEFAECSANTNDDEKSADIKPLQE 642
+ GS E + + I +E ECS+ ++DD++ D ++E
Sbjct: 449 YPGSIFSDEDSLSDLAEILKDIEEYECSSESSDDQEKDDFDVVEE 493
>U53181-7|AAA93487.1| 472|Caenorhabditis elegans Hypothetical
protein F36D4.4 protein.
Length = 472
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 111 AYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRN 227
++SQ ++F + + N+ E N T +I P + LRN
Sbjct: 356 SFSQMNKSFANTRSNVREDENGNNTAEIEVTPNEPLLRN 394
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 346 DHSGKHNSPSNIVQQTGPAISKRKPSYQRTT*KRNKFSSCDQIESTA 486
D + + SP QQ P++ +RK +R +R SS ++ STA
Sbjct: 303 DRTVRRRSPERRRQQRSPSVERRKSPQRRDERRRRHDSSENERRSTA 349
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +3
Query: 144 MKENIEEYITSNKTLKIVDLPGQERLR--NKFFEQHKSSLRE 263
+K+N EE I K KI D G ERLR K ++ H +RE
Sbjct: 389 LKDNFEELIYQVKQEKIADEKGIERLRVLQKIYD-HVKMIRE 429
>AC006619-3|AAK68253.1| 943|Caenorhabditis elegans Hypothetical
protein C46C11.1 protein.
Length = 943
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +2
Query: 395 DQPLAKGSQVIKGL-LEKEINLVRVTKSNQLQSVDPSEGTPGRS*VKRVKISNSLTLEIK 571
D P+ G + + L +E+EI + S + + + +++ +S+T
Sbjct: 686 DTPVELGLEATENLVIEEEIEALTSVDEVSTPSTENIQEVHTTKRPRLLQMLSSVTSRES 745
Query: 572 SNSQSVPPTRMTMKNPLTSSLCRNGF 649
++Q+ P T + PL+ S NGF
Sbjct: 746 RDTQTAPSTPLQQPKPLSHSSSMNGF 771
>Z37093-6|CAJ85783.1| 176|Caenorhabditis elegans Hypothetical
protein ZK669.5b protein.
Length = 176
Score = 27.9 bits (59), Expect = 7.5
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 242 AQE*SKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTT--PLLILCNKQDQPLAKG 415
+Q+ +G+ D+I + DV + YT+ IQ +T PL+ + NK D + +
Sbjct: 58 SQKWEEGMSKEHDAIALVFSTTDVYSFEYTLELYNEIQKSTERIPLVFIENKID--IVED 115
Query: 416 SQVIKGLLEKEI 451
SQ+ KGL+E E+
Sbjct: 116 SQMDKGLVEGEM 127
>Z37093-5|CAJ85782.1| 212|Caenorhabditis elegans Hypothetical
protein ZK669.5a protein.
Length = 212
Score = 27.9 bits (59), Expect = 7.5
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 242 AQE*SKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTT--PLLILCNKQDQPLAKG 415
+Q+ +G+ D+I + DV + YT+ IQ +T PL+ + NK D + +
Sbjct: 58 SQKWEEGMSKEHDAIALVFSTTDVYSFEYTLELYNEIQKSTERIPLVFIENKID--IVED 115
Query: 416 SQVIKGLLEKEI 451
SQ+ KGL+E E+
Sbjct: 116 SQMDKGLVEGEM 127
>Z81016-5|CAB02665.3| 640|Caenorhabditis elegans Hypothetical
protein F21G4.1 protein.
Length = 640
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 83 WQDFAVCKTRLLSIQTDFYFYERKY*RVYNF**NIENSR 199
W F VC + L + F+F+ R Y +F +E+SR
Sbjct: 242 WLGFLVCGSAYLILAVPFFFFPRTYKHPDSFHLMLEHSR 280
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,853,214
Number of Sequences: 27780
Number of extensions: 332237
Number of successful extensions: 1088
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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