Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1350
(705 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g18770.1 68415.m02185 expressed protein 63 2e-10
At5g05670.2 68418.m00624 expressed protein 54 9e-08
At5g05670.1 68418.m00623 expressed protein 54 9e-08
At3g22950.1 68416.m02893 ADP-ribosylation factor, putative simil... 42 5e-04
At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identi... 38 0.009
At5g14670.1 68418.m01719 ADP-ribosylation factor, putative simil... 37 0.011
At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearl... 37 0.011
At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearl... 37 0.011
At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearl... 37 0.011
At1g23490.1 68414.m02948 ADP-ribosylation factor identical to SP... 37 0.011
At1g10630.1 68414.m01205 ADP-ribosylation factor, putative simil... 37 0.011
At2g24765.1 68415.m02959 ADP-ribosylation factor 3 (ARF3) identi... 37 0.015
At3g62290.1 68416.m06998 ADP-ribosylation factor identical to GP... 36 0.020
At5g17060.1 68418.m01999 ADP-ribosylation factor, putative simil... 36 0.026
At3g03120.1 68416.m00308 ADP-ribosylation factor, putative simil... 36 0.026
At2g15310.1 68415.m01746 ADP-ribosylation factor, putative simil... 33 0.14
At3g44180.1 68416.m04737 syntaxin-related family protein contain... 29 3.0
At5g23480.1 68418.m02755 expressed protein 28 5.2
At1g77310.1 68414.m09004 wound-responsive protein, putative simi... 28 5.2
At3g44060.1 68416.m04720 F-box family protein contains F-box dom... 28 6.9
At2g32290.1 68415.m03947 beta-amylase, putative / 1,4-alpha-D-gl... 28 6.9
>At2g18770.1 68415.m02185 expressed protein
Length = 260
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/71 (40%), Positives = 46/71 (64%)
Frame = +2
Query: 263 IVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQVIKGLLE 442
+VFV+D++ IR +EYLY IL + + N TP+L+ CNK D+ A + I+ +E
Sbjct: 136 VVFVVDALEFLPNIRAASEYLYDILTNASVIKNKTPVLLCCNKTDKVTAHTKEFIRKQME 195
Query: 443 KEINLVRVTKS 475
KEI+ +RV++S
Sbjct: 196 KEIDKLRVSRS 206
Score = 44.4 bits (100), Expect = 7e-05
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Frame = +3
Query: 36 RYTLRNSVLLMGLSDSGKTLLFVRLA-YSQYRQTFTSMKENIEEYITSN---------KT 185
R T N+VLL GLS SGKT+LF +L S ++ TSM+ N ++ N K
Sbjct: 51 RRTKSNTVLLSGLSGSGKTVLFYQLRDGSSHQGAVTSMEPNEGTFVLHNENNTKKGKVKP 110
Query: 186 LKIVDLPGQERLRNKFFE 239
+ ++D+PG RL +K E
Sbjct: 111 VHLIDVPGHSRLISKLEE 128
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 523 LGKEGKDFEFSHIRNKVEFAECSANTNDDEK 615
LG EG+ F FSH NKV AE S T + ++
Sbjct: 219 LGIEGEVFSFSHCHNKVTVAEASGLTGETDQ 249
>At5g05670.2 68418.m00624 expressed protein
Length = 260
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = +2
Query: 263 IVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQVIKGLLE 442
IVFV+D++ R +EYLY IL + + P+L+ CNK D+ A + I+ +E
Sbjct: 136 IVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVLLCCNKTDKLTAHTKEFIRKQME 195
Query: 443 KEINLVRVTKS 475
KEI +R ++S
Sbjct: 196 KEIEKLRASRS 206
Score = 48.0 bits (109), Expect = 6e-06
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Frame = +3
Query: 9 LIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLA-YSQYRQTFTSMKENIEEYITSNKT 185
L+F I R T N+VLL GL+ SGKT+LF +L S ++ T TSM+ N ++ ++
Sbjct: 43 LLFLSIRLVRRTKSNTVLLSGLTGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEN 102
Query: 186 LK--------IVDLPGQERLRNKFFE 239
K +VD+PG RLR K E
Sbjct: 103 TKKGKIKPVHLVDVPGHSRLRPKLEE 128
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 523 LGKEGKDFEFSHIRNKVEFAECSANTNDDEKSADIKPLQEWI 648
+G EG+ F F+H NKV AE S T + + D ++E+I
Sbjct: 219 IGIEGEVFSFTHCSNKVTVAEASGLTGETIQIEDF--IREYI 258
>At5g05670.1 68418.m00623 expressed protein
Length = 260
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = +2
Query: 263 IVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQVIKGLLE 442
IVFV+D++ R +EYLY IL + + P+L+ CNK D+ A + I+ +E
Sbjct: 136 IVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVLLCCNKTDKLTAHTKEFIRKQME 195
Query: 443 KEINLVRVTKS 475
KEI +R ++S
Sbjct: 196 KEIEKLRASRS 206
Score = 48.0 bits (109), Expect = 6e-06
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Frame = +3
Query: 9 LIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLA-YSQYRQTFTSMKENIEEYITSNKT 185
L+F I R T N+VLL GL+ SGKT+LF +L S ++ T TSM+ N ++ ++
Sbjct: 43 LLFLSIRLVRRTKSNTVLLSGLTGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEN 102
Query: 186 LK--------IVDLPGQERLRNKFFE 239
K +VD+PG RLR K E
Sbjct: 103 TKKGKIKPVHLVDVPGHSRLRPKLEE 128
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 523 LGKEGKDFEFSHIRNKVEFAECSANTNDDEKSADIKPLQEWI 648
+G EG+ F F+H NKV AE S T + + D ++E+I
Sbjct: 219 IGIEGEVFSFTHCSNKVTVAEASGLTGETIQIEDF--IREYI 258
>At3g22950.1 68416.m02893 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GB:P91924 [Dugesia japonica]
Length = 183
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/66 (27%), Positives = 37/66 (56%)
Frame = +3
Query: 57 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 236
++++GL ++GKT +L + T ++ N+EE + N ++ DL GQ+RLR +
Sbjct: 20 IVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQDRLRTSWA 79
Query: 237 EQHKSS 254
++ +
Sbjct: 80 TYYRGT 85
>At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identical
to ADP-ribosylation factor ARF1({Arabidopsis thaliana}
(SP:P36397) (GP:166586)
Length = 181
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 9 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 185
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 186 LKIVDLPGQERLR 224
+ D+ GQ+++R
Sbjct: 63 FTVWDVGGQDKIR 75
>At5g14670.1 68418.m01719 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor DcARF1 (GI:965483) [Daucus
carota].
Length = 188
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 9 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 185
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LNFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 186 LKIVDLPGQERLR 224
+ D+ GQ+++R
Sbjct: 63 FTVWDVGGQDKIR 75
>At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 9 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 185
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 186 LKIVDLPGQERLR 224
+ D+ GQ+++R
Sbjct: 63 FTVWDVGGQDKIR 75
>At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 9 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 185
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 186 LKIVDLPGQERLR 224
+ D+ GQ+++R
Sbjct: 63 FTVWDVGGQDKIR 75
>At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 9 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 185
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 186 LKIVDLPGQERLR 224
+ D+ GQ+++R
Sbjct: 63 FTVWDVGGQDKIR 75
>At1g23490.1 68414.m02948 ADP-ribosylation factor identical to
SP:Q9SRC3 ADP-ribosylation factor 1-like [Arabidopsis
thaliana], ADP-ribosylation factor GI:166586
[Arabidopsis thaliana]
Length = 181
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 9 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 185
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 186 LKIVDLPGQERLR 224
+ D+ GQ+++R
Sbjct: 63 FTVWDVGGQDKIR 75
>At1g10630.1 68414.m01205 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GI:166586 from [Arabidopsis
thaliana]
Length = 181
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 9 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 185
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 186 LKIVDLPGQERLR 224
+ D+ GQ+++R
Sbjct: 63 FTVWDVGGQDKIR 75
>At2g24765.1 68415.m02959 ADP-ribosylation factor 3 (ARF3) identical
to GP:453191 ADP-ribosylation factor 3 {Arabidopsis
thaliana}; contains domain PF00025: ADP-ribosylation
factor family
Length = 182
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +3
Query: 9 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 185
++F +FS + + + +L++GL ++GKT + RL + T ++ N+E +N
Sbjct: 3 ILFTRMFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIK 62
Query: 186 LKIVDLPGQERLR 224
++ DL GQ +R
Sbjct: 63 FQVWDLGGQTSIR 75
>At3g62290.1 68416.m06998 ADP-ribosylation factor identical to
GP:166586 ADP-ribosylation factor {Arabidopsis
thaliana}; ADP-ribosylation factor 1 - Arabidopsis
thaliana, PIR:S28875
Length = 181
Score = 36.3 bits (80), Expect = 0.020
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 9 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 185
L F +FS+ + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LSFGKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 186 LKIVDLPGQERLR 224
+ D+ GQ+++R
Sbjct: 63 FTVWDVGGQDKIR 75
>At5g17060.1 68418.m01999 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster)
Length = 192
Score = 35.9 bits (79), Expect = 0.026
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +3
Query: 57 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLR 224
V+++GL +GKT + +L + T ++ N+E+ N + D+ GQE+LR
Sbjct: 20 VVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVMFTVWDVGGQEKLR 75
>At3g03120.1 68416.m00308 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster}
Length = 192
Score = 35.9 bits (79), Expect = 0.026
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +3
Query: 57 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLR 224
V+++GL +GKT + +L + T ++ N+E+ N + D+ GQE+LR
Sbjct: 20 VVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLR 75
>At2g15310.1 68415.m01746 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor (GI:861205) [Chlamydomonas
reinhardtii]
Length = 205
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +3
Query: 57 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLR 224
+L++GL SGKT + +L + T ++ N+E + D+ GQE++R
Sbjct: 20 ILMVGLDGSGKTTILYKLKLGEVVTTVPTIGFNLETVEYKGINFTVWDIGGQEKIR 75
>At3g44180.1 68416.m04737 syntaxin-related family protein contains a
novel domain similar to F-box that is shared among other
proteins in Arabidopsis; similar to proteins At3g54160,
At1g47920 (syntaxin SYP81), At5g41830, At3g58890,
At1g56610, At1g48390, At3g59270 [Arabidopsis thaliana]
Length = 202
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 286 DRINHKHNSLRLLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSS 158
D I+ HN L L S +S+ C G +FN L+++++SS
Sbjct: 95 DLISGLHNVKTLHLTSSTVEVISVCCKGGLPVFNNLVDLVFSS 137
>At5g23480.1 68418.m02755 expressed protein
Length = 113
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 565 NKVEFAECSANTNDDEKSADIKPLQEWISEALDWNYHY 678
N +E E S + +DDEK + + Q + + + W Y Y
Sbjct: 26 NPIEIIELSDDDDDDEKDKNDQAYQSYDPKKVMWFYEY 63
>At1g77310.1 68414.m09004 wound-responsive protein, putative similar
to wound-responsive protein 14.05 (GI:16506638)
[Castanea sativa]
Length = 699
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 419 QVIKGLLEKEINLVRVTKSNQLQSVDPSEGTPGRS*VKRVKISNSLTLEIKSNS 580
+ ++G + KE++ ++TK Q Q V SEG V++ S+ L + S
Sbjct: 541 RALEGNIGKEMDQTKITKKKQTQLVPKSEGITYPDKTSGVEVKASVVLTATTTS 594
>At3g44060.1 68416.m04720 F-box family protein contains F-box domain
Pfam:PF00646
Length = 427
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 265 NSLRLLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSS 158
N L L CS +S+ C G +FN L+E+++SS
Sbjct: 277 NVKTLHLTCSTVEVISVYCKGGLPMFNNLVELVFSS 312
>At2g32290.1 68415.m03947 beta-amylase, putative /
1,4-alpha-D-glucan maltohydrolase, putative similar to
beta-amylase GI:13560977 from [Castanea crenata]
Length = 577
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 66 MGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKI 194
+ LS +L R A YR S +EN+E++I+S + I
Sbjct: 201 LSLSVDNLSLFRGRTAVEMYRDYMKSFRENMEDFISSGVIIDI 243
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,743,007
Number of Sequences: 28952
Number of extensions: 301485
Number of successful extensions: 994
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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