Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1349
(770 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q17P00 Cluster: Werner helicase interacting protein; n=... 58 2e-07
UniRef50_UPI00015B415D Cluster: PREDICTED: similar to werner hel... 58 3e-07
UniRef50_UPI00015B6046 Cluster: PREDICTED: similar to werner hel... 54 5e-06
UniRef50_UPI0000DB7733 Cluster: PREDICTED: similar to Werner hel... 50 6e-05
UniRef50_Q4P896 Cluster: Putative uncharacterized protein; n=1; ... 44 0.006
UniRef50_UPI0000D57862 Cluster: PREDICTED: similar to ATPase WRN... 40 0.091
UniRef50_O48696 Cluster: F3I6.23 protein; n=3; Arabidopsis thali... 40 0.091
UniRef50_A6PRD7 Cluster: AAA ATPase, central domain protein; n=4... 39 0.16
UniRef50_A5UZV8 Cluster: AAA ATPase, central domain protein; n=1... 39 0.16
UniRef50_Q75JU2 Cluster: Similar to Thermoanaerobacter tengconge... 38 0.37
UniRef50_A5D3E6 Cluster: ATPase; n=3; Peptococcaceae|Rep: ATPase... 37 0.48
UniRef50_P45262 Cluster: Uncharacterized protein HI1590; n=125; ... 37 0.64
UniRef50_Q0EY57 Cluster: ATPase; n=1; Mariprofundus ferrooxydans... 36 1.5
UniRef50_UPI0000E4A039 Cluster: PREDICTED: hypothetical protein;... 35 2.6
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb... 35 2.6
UniRef50_A6DHI5 Cluster: ATPase, AAA family protein; n=1; Lentis... 34 4.5
UniRef50_A1CI50 Cluster: AAA family ATPase, putative; n=15; Pezi... 33 7.9
>UniRef50_Q17P00 Cluster: Werner helicase interacting protein; n=2;
Endopterygota|Rep: Werner helicase interacting protein -
Aedes aegypti (Yellowfever mosquito)
Length = 560
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = +2
Query: 56 RYLIEEASLQWLAEMCDGDARVALSALELALNARDPGSDVHLSGPAVLTHDDIKDGIK 229
R +I +++WLAE+CDGDAR+AL++L+LALN D S ++ D+IK+GIK
Sbjct: 329 RMMISAETIRWLAEICDGDARIALNSLQLALNTVAARQDEEESALKRISLDEIKEGIK 386
>UniRef50_UPI00015B415D Cluster: PREDICTED: similar to werner
helicase interacting protein; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to werner helicase
interacting protein - Nasonia vitripennis
Length = 522
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/60 (43%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = +2
Query: 53 NRYLIEEASLQWLAEMCDGDARVALSALELALNARDPGSD-VHLSGPAVLTHDDIKDGIK 229
N++ I+ +++WLAE DGDAR+AL LELA++++ P S+ SG ++ DD+KD +K
Sbjct: 299 NKFFIDRETVKWLAETSDGDARIALGGLELAIHSKVPSSEGSSSSGLNFISLDDVKDSLK 358
>UniRef50_UPI00015B6046 Cluster: PREDICTED: similar to werner
helicase interacting protein; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to werner helicase
interacting protein - Nasonia vitripennis
Length = 462
Score = 53.6 bits (123), Expect = 5e-06
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = +2
Query: 56 RYLIEEASLQWLAEMCDGDARVALSALELALNARDPGSDVHLSGPAVLTHDDIKDGIK 229
++ +E+ L+WLAE CDGDARVAL LE+ + AR +++ S P L +D+K ++
Sbjct: 259 KFFVEQKILEWLAEACDGDARVALGGLEMTVQARVSNANIS-SKPIKLNLNDVKHSLE 315
>UniRef50_UPI0000DB7733 Cluster: PREDICTED: similar to Werner
helicase interacting protein isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to Werner helicase
interacting protein isoform 1 - Apis mellifera
Length = 433
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = +2
Query: 59 YLIEEASLQWLAEMCDGDARVALSALELALNARDPGSDVHLSGPAVLTHDDIKDGIKVLL 238
+ I + ++ WLAE+CDGDARVAL+ LELA+ + S+ S +T +D+K+ +K
Sbjct: 202 FFINKTAIDWLAEVCDGDARVALNDLELAIKIKI--SNKLNSNFVSITLEDVKESVKQTH 259
Query: 239 FLS 247
LS
Sbjct: 260 MLS 262
>UniRef50_Q4P896 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 566
Score = 43.6 bits (98), Expect = 0.006
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +2
Query: 65 IEEASLQWLAEMCDGDARVALSALELALNARD 160
I+E ++W+A M DGDAR AL ALELAL+ D
Sbjct: 223 IDEHLIRWIANMADGDARTALGALELALSTTD 254
>UniRef50_UPI0000D57862 Cluster: PREDICTED: similar to ATPase WRNIP1
(Werner helicase-interacting protein 1); n=1; Tribolium
castaneum|Rep: PREDICTED: similar to ATPase WRNIP1
(Werner helicase-interacting protein 1) - Tribolium
castaneum
Length = 494
Score = 39.5 bits (88), Expect = 0.091
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +2
Query: 59 YLIEEASLQWLAEMCDGDARVALSALELALNARDPGSDVHLSGPAVLTHDDIKDGIK 229
+ ++ +L+WLA++ DGDAR+AL L+L L + + V+T +DIK+ IK
Sbjct: 278 FAVQADALKWLADISDGDARIALGNLQLVLQYNEDKN-------KVVTIEDIKEKIK 327
>UniRef50_O48696 Cluster: F3I6.23 protein; n=3; Arabidopsis
thaliana|Rep: F3I6.23 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 525
Score = 39.5 bits (88), Expect = 0.091
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +2
Query: 53 NRYLIEEASLQWLAEMCDGDARVALSALELALNARDPGSDVHLSGPAVLTHDDIKDGIK 229
N ++++ +++LA CDGDARVAL+ALE++ + AV++ DD K+ ++
Sbjct: 279 NSVEVDDSVIEFLANNCDGDARVALNALEISATM----ATTRAGTDAVVSIDDAKEALQ 333
>UniRef50_A6PRD7 Cluster: AAA ATPase, central domain protein; n=4;
Bacteria|Rep: AAA ATPase, central domain protein -
Victivallis vadensis ATCC BAA-548
Length = 455
Score = 38.7 bits (86), Expect = 0.16
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = +2
Query: 56 RYLIEEASLQWLAEMCDGDARVALSALELALNARDPGSD 172
R +E + +++A C+GD R +L+ALE+A+ DPG+D
Sbjct: 202 RVELEPDAAEFIARTCEGDGRRSLNALEIAVLTSDPGAD 240
>UniRef50_A5UZV8 Cluster: AAA ATPase, central domain protein; n=15;
cellular organisms|Rep: AAA ATPase, central domain
protein - Roseiflexus sp. RS-1
Length = 505
Score = 38.7 bits (86), Expect = 0.16
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +2
Query: 86 WLAEMCDGDARVALSALELALNARDPGSDVHLSGPAVLTHDDIKDGIK 229
+L M +GDAR AL+ALE A A+ PG + G ++T +DI+D ++
Sbjct: 207 YLINMSNGDARTALNALEAAALAKPPG----VGGKRLITVEDIRDALQ 250
>UniRef50_Q75JU2 Cluster: Similar to Thermoanaerobacter
tengcongensis. Uncharacterized ATPase related to the
helicase subunit of the holliday junction resolvase;
n=2; Dictyostelium discoideum|Rep: Similar to
Thermoanaerobacter tengcongensis. Uncharacterized ATPase
related to the helicase subunit of the holliday junction
resolvase - Dictyostelium discoideum (Slime mold)
Length = 876
Score = 37.5 bits (83), Expect = 0.37
Identities = 15/33 (45%), Positives = 27/33 (81%)
Frame = +2
Query: 56 RYLIEEASLQWLAEMCDGDARVALSALELALNA 154
R +++E +++ LAE+ DGDARVA++ L++A+ A
Sbjct: 369 RLIMDEDAIKSLAEIADGDARVAINVLDMAIKA 401
>UniRef50_A5D3E6 Cluster: ATPase; n=3; Peptococcaceae|Rep: ATPase -
Pelotomaculum thermopropionicum SI
Length = 440
Score = 37.1 bits (82), Expect = 0.48
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +2
Query: 77 SLQWLAEMCDGDARVALSALELALNARDPGSD 172
+L LA + +GDAR AL+ALELA+ A PG D
Sbjct: 199 ALDHLAAVANGDARAALNALELAVLATPPGED 230
>UniRef50_P45262 Cluster: Uncharacterized protein HI1590; n=125;
Bacteria|Rep: Uncharacterized protein HI1590 -
Haemophilus influenzae
Length = 446
Score = 36.7 bits (81), Expect = 0.64
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +2
Query: 56 RYLIEEASLQWLAEMCDGDARVALSALELALNARD 160
R ++EE LQ LAE +GDAR+AL+ LEL ++ D
Sbjct: 189 RLILEENLLQVLAEYVNGDARLALNCLELMVDMAD 223
>UniRef50_Q0EY57 Cluster: ATPase; n=1; Mariprofundus ferrooxydans
PV-1|Rep: ATPase - Mariprofundus ferrooxydans PV-1
Length = 448
Score = 35.5 bits (78), Expect = 1.5
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 59 YLIEEASLQWLAEMCDGDARVALSALELALNA 154
+ +++ +L WLAE DGDAR AL+ALE A
Sbjct: 191 FSLDDDALVWLAENSDGDARYALNALESLFQA 222
>UniRef50_UPI0000E4A039 Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 672
Score = 34.7 bits (76), Expect = 2.6
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Frame = +2
Query: 65 IEEASLQWLAEMCDGDARVALSALELALN---ARDPGSDVHLS---GPAVLTHDDIKDGI 226
IE +L LA +CDGDAR AL++L++ L+ G S +V+T D I+D +
Sbjct: 463 IEREALCLLANLCDGDARSALNSLQMVLDVAKGSTGGQQADASKVLRSSVITIDQIRDSL 522
Query: 227 K 229
+
Sbjct: 523 Q 523
>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
mori (Silk moth)
Length = 782
Score = 34.7 bits (76), Expect = 2.6
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1
Query: 520 AAW*YLPVRTHKRSYHQ 570
A W YLP RTHKRSYH+
Sbjct: 569 AEWWYLPARTHKRSYHR 585
>UniRef50_A6DHI5 Cluster: ATPase, AAA family protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: ATPase, AAA family
protein - Lentisphaera araneosa HTCC2155
Length = 430
Score = 33.9 bits (74), Expect = 4.5
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2
Query: 68 EEASLQWLAEMCDGDARVALSALELAL 148
+E L++L+E C+GDAR AL+ +ELA+
Sbjct: 189 DEEGLKFLSENCEGDARRALTVIELAV 215
>UniRef50_A1CI50 Cluster: AAA family ATPase, putative; n=15;
Pezizomycotina|Rep: AAA family ATPase, putative -
Aspergillus clavatus
Length = 539
Score = 33.1 bits (72), Expect = 7.9
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +2
Query: 62 LIEEASLQWLAEMCDGDARVALSALELALN 151
L+++ + +LA DGDAR +L+ LELA++
Sbjct: 296 LVDDELISYLARFADGDARTSLNLLELAMD 325
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,061,076
Number of Sequences: 1657284
Number of extensions: 13620191
Number of successful extensions: 27376
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 26383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27373
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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