Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1347
(798 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 197 1e-50
SB_56| Best HMM Match : Actin (HMM E-Value=0) 196 1e-50
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 196 1e-50
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 196 2e-50
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 3e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 8e-25
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 3e-22
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 88 7e-18
SB_54| Best HMM Match : Actin (HMM E-Value=0) 84 1e-16
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 78 1e-14
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 61 9e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 53 2e-07
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 9e-07
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 42 4e-04
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_45932| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.050
SB_47178| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 34 0.12
SB_28186| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.35
SB_6118| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_39039| Best HMM Match : Drf_FH1 (HMM E-Value=6.4) 32 0.62
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.82
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.82
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 1.1
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 1.1
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 1.1
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 1.4
SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36) 30 1.9
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 30 1.9
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 30 1.9
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_31197| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_15222| Best HMM Match : Glycoprotein_G (HMM E-Value=0.84) 30 2.5
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 30 2.5
SB_40856| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 29 3.3
SB_45921| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 29 4.4
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 29 4.4
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 4.4
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 4.4
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 29 4.4
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 4.4
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 4.4
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 29 5.8
SB_43523| Best HMM Match : GRP (HMM E-Value=0.013) 29 5.8
SB_38097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 29 5.8
SB_52813| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_50338| Best HMM Match : TNFR_c6 (HMM E-Value=1.4e-05) 28 7.6
SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24) 28 7.6
SB_33386| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_23472| Best HMM Match : HIT (HMM E-Value=0.43) 28 7.6
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028) 28 7.6
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 7.6
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_42341| Best HMM Match : DUF701 (HMM E-Value=3) 28 7.6
SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 28 7.6
SB_12041| Best HMM Match : PHD (HMM E-Value=0.001) 28 7.6
SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0) 28 7.6
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 197 bits (480), Expect = 1e-50
Identities = 113/177 (63%), Positives = 123/177 (69%), Gaps = 1/177 (0%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA-CSRCTRPVVPPVSCWTPATVSPTPCPST 592
APLNPKANREKMTQIMFETFN+PAMYVAIQA S + + V+ T P
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIY 166
Query: 593 KDTHSPTPSLRLDLSPVATSQTTLMKILTERRLLVHYHPPNGEIVRDIKEKLVLRSL 763
+ P LRLDL+ + LMKILTER EIVRDIKEKL +L
Sbjct: 167 EGYALPHAILRLDLAGRDLTD-YLMKILTERG-YSFTTTAEREIVRDIKEKLAYVAL 221
Score = 109 bits (263), Expect = 2e-24
Identities = 49/52 (94%), Positives = 52/52 (100%)
Frame = +3
Query: 99 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 53
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 196 bits (479), Expect = 1e-50
Identities = 112/172 (65%), Positives = 121/172 (70%), Gaps = 1/172 (0%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA-CSRCTRPVVPPVSCWTPATVSPTPCPST 592
APLNPKANREKMTQIMFETFN+PAMYVAIQA S + + V+ T P
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIY 166
Query: 593 KDTHSPTPSLRLDLSPVATSQTTLMKILTERRLLVHYHPPNGEIVRDIKEKL 748
+ P LRLDL+ + LMKILTER EIVRDIKEKL
Sbjct: 167 EGYALPHAILRLDLAGRDLTD-YLMKILTERG-YSFTTTAEREIVRDIKEKL 216
Score = 111 bits (266), Expect = 8e-25
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +3
Query: 99 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 53
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 196 bits (479), Expect = 1e-50
Identities = 112/172 (65%), Positives = 121/172 (70%), Gaps = 1/172 (0%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA-CSRCTRPVVPPVSCWTPATVSPTPCPST 592
APLNPKANREKMTQIMFETFN+PAMYVAIQA S + + V+ T P
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIY 167
Query: 593 KDTHSPTPSLRLDLSPVATSQTTLMKILTERRLLVHYHPPNGEIVRDIKEKL 748
+ P LRLDL+ + LMKILTER EIVRDIKEKL
Sbjct: 168 EGYALPHAILRLDLAGRDLTD-YLMKILTERG-YSFTTTAEREIVRDIKEKL 217
Score = 117 bits (281), Expect = 1e-26
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = +3
Query: 93 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 196 bits (477), Expect = 2e-50
Identities = 111/172 (64%), Positives = 121/172 (70%), Gaps = 1/172 (0%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA-CSRCTRPVVPPVSCWTPATVSPTPCPST 592
APLNPKANREKMTQIMFETFN+PAMYVAIQA S + + V+ T P
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIY 167
Query: 593 KDTHSPTPSLRLDLSPVATSQTTLMKILTERRLLVHYHPPNGEIVRDIKEKL 748
+ P +RLDL+ + LMKILTER EIVRDIKEKL
Sbjct: 168 EGYALPHAIIRLDLAGRDLTD-YLMKILTERG-YSFTTTAEREIVRDIKEKL 217
Score = 112 bits (270), Expect = 3e-25
Identities = 51/54 (94%), Positives = 53/54 (98%)
Frame = +3
Query: 93 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 185 bits (451), Expect = 3e-47
Identities = 84/91 (92%), Positives = 87/91 (95%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA 508
APLNPKANREKMTQIMFETFN+PAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQA 139
Score = 112 bits (270), Expect = 3e-25
Identities = 49/54 (90%), Positives = 53/54 (98%)
Frame = +3
Query: 93 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 61.7 bits (143), Expect = 7e-10
Identities = 29/35 (82%), Positives = 33/35 (94%), Gaps = 2/35 (5%)
Frame = +1
Query: 505 SLLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 603
++LSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 111 bits (266), Expect = 8e-25
Identities = 49/52 (94%), Positives = 52/52 (100%)
Frame = +3
Query: 99 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 53
Score = 89.4 bits (212), Expect = 3e-18
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = +1
Query: 505 SLLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILASGLKPGRDLTDY 660
++LSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+ L GRDLTDY
Sbjct: 101 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDL-AGRDLTDY 151
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 364
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 51.2 bits (117), Expect = 9e-07
Identities = 45/105 (42%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Frame = +2
Query: 437 NREKMTQIMFETFNTPAMYVAIQA-CSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 613
N + M +IMFETFN+PAMYVAIQA S + + V+ T P + P
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPH 136
Query: 614 PSLRLDLSPVATSQTTLMKILTERRLLVHYHPPNGEIVRDIKEKL 748
+RLDL+ + LMKILTER EIVRDIKEKL
Sbjct: 137 AIIRLDLAGRDLTD-YLMKILTERG-YSFTTTAEREIVRDIKEKL 179
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 102 bits (245), Expect = 3e-22
Identities = 64/180 (35%), Positives = 103/180 (57%), Gaps = 2/180 (1%)
Frame = +2
Query: 215 SGRDGRYGTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 391
S + G + L++GDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 392 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA-CSRCTRPVVPPVSCWTPATV 568
VLLTE PLNP NREKM ++MFE + +Y+AIQA + + ++ V + V
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGV 163
Query: 569 SPTPCPSTKDTHSPTPSLRLDLSPVATSQTTLMKILTERRLLVHYHPPNGEIVRDIKEKL 748
+ CP + P + RLD++ ++ L+K++ R + H + E VR +KEKL
Sbjct: 164 THI-CPVYEGFALPHLTRRLDIAGRDITK-YLIKLMLLRGYAFN-HTADFETVRMMKEKL 220
Score = 64.5 bits (150), Expect = 9e-11
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +1
Query: 505 SLLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILASGLKPGRDLTDY 660
++L+LYA G TG+V+DSGDGV+H P+YEG+ALPH + GRD+T Y
Sbjct: 142 AVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDI-AGRDITKY 192
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 111 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 209
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 88.2 bits (209), Expect = 7e-18
Identities = 42/52 (80%), Positives = 45/52 (86%)
Frame = +1
Query: 505 SLLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILASGLKPGRDLTDY 660
++LSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAIL L GRDLTDY
Sbjct: 17 AVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDL-AGRDLTDY 67
Score = 42.3 bits (95), Expect = 4e-04
Identities = 37/97 (38%), Positives = 45/97 (46%)
Frame = +2
Query: 458 IMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSLRLDLS 637
IMFE FN+PA+YVAIQA + P + P LRLDL+
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 638 PVATSQTTLMKILTERRLLVHYHPPNGEIVRDIKEKL 748
+ LMK++TER EIVRDIKEKL
Sbjct: 61 GRDLTD-YLMKLMTERG-YSFTTTAEREIVRDIKEKL 95
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 83.8 bits (198), Expect = 1e-16
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = +2
Query: 344 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 508
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QA
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQA 2183
Score = 72.9 bits (171), Expect = 3e-13
Identities = 34/52 (65%), Positives = 40/52 (76%)
Frame = +1
Query: 505 SLLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILASGLKPGRDLTDY 660
++++LYASGRTTG V D GDGVSHTVP+Y+GY LPHA L GRDLT Y
Sbjct: 2183 AVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDL-AGRDLTHY 2233
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 117 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 218
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 77.8 bits (183), Expect = 1e-14
Identities = 33/52 (63%), Positives = 47/52 (90%)
Frame = +1
Query: 505 SLLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILASGLKPGRDLTDY 660
++LSLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+ + + GRD++ Y
Sbjct: 164 AVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDI-AGRDVSRY 214
Score = 64.9 bits (151), Expect = 7e-11
Identities = 25/39 (64%), Positives = 34/39 (87%)
Frame = +2
Query: 392 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 508
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QA
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQA 164
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 61.3 bits (142), Expect = 9e-10
Identities = 24/65 (36%), Positives = 42/65 (64%)
Frame = +2
Query: 302 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 481
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 482 PAMYV 496
PA ++
Sbjct: 63 PAFFL 67
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = +1
Query: 505 SLLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILASGL 633
S+L+ +A+GR+ G+V+DSG + VP+++GY L AI+ S L
Sbjct: 71 SVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPL 113
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 102 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 218
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/66 (43%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 218 GRDGRYGTEGL--LLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 391
GR + G E L +GDEA K T K+PI H IV +WD ME+ W + LR PE
Sbjct: 273 GRSAK-GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPE 330
Query: 392 EHPVLL 409
+H LL
Sbjct: 331 DHYFLL 336
Score = 32.3 bits (70), Expect = 0.47
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 538 TGIVLDSGDGVSHTVPI 588
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 9e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 87 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 233
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +1
Query: 511 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 618
LSLYASG T G+ L SG + IYEG+ L H +
Sbjct: 770 LSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTL 805
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 538 TGIVLDSGDGVSHTVPIYEGYALPHAILASGLKPGRDLT 654
TG V+DSGDGV+H +P+ EGY + I + GRD+T
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPI-AGRDIT 99
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 215 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 99
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +2
Query: 218 GRDGRYGTEGLLLGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 388
GR G + GL +G++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 389 EEHPVLLTEAPLNPKANRE 445
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_45932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 35.5 bits (78), Expect = 0.050
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +2
Query: 560 ATVSPTPCP--STKDTHSPTPSLRLDLSPVATSQTTLMKILTERRLLVHYHPPNGEIV-- 727
+T +P P S H P S L L+P+ S L I T RLL P +G I
Sbjct: 18 STCTPVALPFISCTPVHPPPNSTVLTLTPLKKSLVDLTWIRTLARLLEKRSPYHGAIAHF 77
Query: 728 RDIKEKLV 751
RDIKEKL+
Sbjct: 78 RDIKEKLL 85
>SB_47178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 34.3 bits (75), Expect = 0.12
Identities = 27/68 (39%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +2
Query: 554 TPATVSPTPCPSTKDTHSPTPSLRLDLSPVATSQTTLMKILTERRLLVHYHPPNGEIV-- 727
TP T+ P S H P S L L+P+ S I T RLL P +G I
Sbjct: 6 TPVTL---PFISCTPVHPPPNSTVLTLTPLKKSLVDFTWIRTLARLLEKQSPYHGAIAHF 62
Query: 728 RDIKEKLV 751
RDIKEKL+
Sbjct: 63 RDIKEKLL 70
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 248 LLLGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 373
L +GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 272 LFIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_28186| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 32.7 bits (71), Expect = 0.35
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 542 VSCWTPATVSPTPCPSTKDTHSPTPSLRLDLSPVATSQTTLMKILTERRLLVHYHPPNGE 721
+S TP ++ C H P S L L+P+ S I T RLL P +G
Sbjct: 17 LSTCTPVALTFISCTPV---HPPPNSTVLTLTPLKKSLVDFTWIRTLARLLEKQSPYHGA 73
Query: 722 IV--RDIKEKLV 751
I RDIKEKL+
Sbjct: 74 IAHFRDIKEKLL 85
>SB_6118| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 32.3 bits (70), Expect = 0.47
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 554 TPATVSPTPCPSTKDTHSPTPSLRLDLSPVATSQTTLMKILTERRLLVHYHPPNGEIV-- 727
TP T+ C H P S L L+P+ S I T RLL P +G I
Sbjct: 6 TPVTLLFISCTPV---HPPPNSTVLTLTPLKKSLVDFTWIRTLARLLEKRSPYHGAIAHF 62
Query: 728 RDIKEKLV 751
RDIKEKL+
Sbjct: 63 RDIKEKLL 70
>SB_39039| Best HMM Match : Drf_FH1 (HMM E-Value=6.4)
Length = 254
Score = 31.9 bits (69), Expect = 0.62
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = +2
Query: 371 ELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVS 547
++ VA E+ LL ++ LNP ++ Q+ + + T + SR P
Sbjct: 155 QIMVAMEKRLRALLEDSTLNPDVRMQRYAQL-YNEYRTMGRLAQLPGASRAA-----PAP 208
Query: 548 CWTPATVSPTPCPSTKDTHSPTPSLRLDLSPVAT 649
TP + TP P T+ P P L L P+ T
Sbjct: 209 --TPQPTAATPLPETEPEPEPEPDLDLPDPPLET 240
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 31.5 bits (68), Expect = 0.82
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
Frame = +2
Query: 518 CTRPVVPPVSCWTPATVSPTPC-----PSTKDTHS-PTPSLR 625
CT+ +P +TP T TPC PST+ +H+ P P+L+
Sbjct: 859 CTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAPPKPTLQ 900
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 452 TQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTPATVSPTPCPS--TKDTHSPTP 616
+Q+ E +N P+ + + CT +P +TP T TP T T TP
Sbjct: 611 SQVNSERYNAPSQSPCTERYTPCTERYIPCTERYTPCTERYTPSTERYTPSTERYTP 667
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 190 GNTARGASSPAKPALHIPEPLSTT 119
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.82
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 281 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 190 GNTARGASSPAKPALHIPEPLSTT 119
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 281 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 281 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 281 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 281 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 281 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 281 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2
Query: 281 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
L C ++ ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36)
Length = 972
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 506 ACSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSLRLDLSPVATS-QTTLMKILTE 682
AC R +R + P P+ V P P T TH+P P D SPV + T+L ++T
Sbjct: 620 ACPRVSRVLSPS----GPSVVVTLPLPPTDHTHTPPPP--TDRSPVYSHLSTSLTGLITI 673
Query: 683 R 685
R
Sbjct: 674 R 674
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 190 GNTARGASSPAKPALHIPEPLSTT 119
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 521 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSLRLDLSPV 643
TRP VP +T PTP P T P P+ ++ P+
Sbjct: 932 TRPTVPTTPTTQASTTRPTPPPPTSALPPPIPATQVPPPPL 972
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/76 (23%), Positives = 27/76 (35%)
Frame = +2
Query: 485 AMYVAIQACSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSLRLDLSPVATSQTTL 664
A+ V + PP + TP +P P P P P L P+ T++ T+
Sbjct: 877 AVQVVVHVTKNPKTTTAPPTTPTTPKPTTPAPPPPLPLAPEPPPPLPPPPPPIQTTRPTV 936
Query: 665 MKILTERRLLVHYHPP 712
T + PP
Sbjct: 937 PTTPTTQASTTRPTPP 952
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 563 TVSPTPCPSTKDTHSPTPSLRLDLSPVATSQTTLMKILTERRLLVH 700
T+SP P S S L++ + VATS LM + ER ++ H
Sbjct: 650 TLSPRPLMSANLATSEVSVLKVSPNEVATSPKPLMTVPVERAIITH 695
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 30.3 bits (65), Expect = 1.9
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 8/111 (7%)
Frame = +2
Query: 371 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVP 538
E APE V T AP + P+ +T + ET PA A++ + +VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 539 PVSCWTPATVSP--TPCPSTKDTHSPTPSLRLDLSPVATS--QTTLMKILT 679
+ + TV+P T P+T T + +P TS +TT+ +T
Sbjct: 1383 ETTASSETTVAPETTDAPATTLAPETTAAPETTWAPETTSAPETTVAPEIT 1433
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.9 bits (64), Expect = 2.5
Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 4/127 (3%)
Frame = +2
Query: 359 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVP 538
T E VAPE + E+ L + +T + ET TP VA + + P
Sbjct: 4915 TMVPETTVAPET--TMAPESTLAAETTMAPVTTVASETTKTPDTTVAPETTMVPEGTLAP 4972
Query: 539 PVSCWTPATVSPTPCPSTKDTHSPTPSLRLDLSPVATS----QTTLMKILTERRLLVHYH 706
+ TV+P + + T +P ++ + + A + +TT+ T R+
Sbjct: 4973 ETTMAPETTVAPETTMAPETTVAPETTMAPETTVAAETTMAPETTVASETTIARVKETTL 5032
Query: 707 PPNGEIV 727
P G+IV
Sbjct: 5033 SPGGQIV 5039
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/88 (23%), Positives = 34/88 (38%)
Frame = +2
Query: 359 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVP 538
T E VAPE + E ++P+ T + ET TP VA + V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 539 PVSCWTPATVSPTPCPSTKDTHSPTPSL 622
+ TV+P + + T +P ++
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAPETTM 4267
>SB_31197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +2
Query: 500 IQACSRCTRPVVPPVS-----CWTPATVSPTPCPSTKDTHSPTPSLRLDLSPVATSQTTL 664
+ C+ T PV+PP+S T TV P P P + +P D P S++ +
Sbjct: 83 LPTCTVTTVPVIPPISQNPLPSPTLVTVHPAPVPIPITNANSSPDSSDDERPQFASRSAV 142
Query: 665 MKI 673
M+I
Sbjct: 143 MQI 145
>SB_15222| Best HMM Match : Glycoprotein_G (HMM E-Value=0.84)
Length = 244
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = +2
Query: 524 RPVVPPVSCWTPATVS---PTPCPSTKDTHSPTPSLRLDLSPVATSQTTLMKILTERRLL 694
+P PPV+ P T S PT P+T+ T PT + V T++ T E L
Sbjct: 151 QPTEPPVTTPVPTTESTAVPTTAPTTEPTTVPTTIPTTIPTTVPTTEPTTAPTTPEPTTL 210
Query: 695 VHYHPP-NGEIVR 730
PP GE R
Sbjct: 211 EPTDPPTTGEYRR 223
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2
Query: 470 TFNTPAMYVAIQACSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSLRLDLSP 640
T TP+ V++Q PV S + T++ P P + DT SPTP L SP
Sbjct: 303 TEETPSRLVSLQ-----NSPVKMMRSTLSAQTLAENPIPESTDTTSPTPPLTDTKSP 354
>SB_40856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 75
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 485 AMYVAIQACSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSLRLDLSPVATSQTTL 664
A + ++ S+ R + +S TP T+ P S HSP + L L+P+ S L
Sbjct: 2 AQWYGLRFSSKRARVRIQRLSTCTPVTM---PFISCTPVHSPPNATVLTLTPLKKSLVDL 58
Query: 665 MKILTERRLLVHYHP 709
I T RLL +P
Sbjct: 59 TWIRTLARLLEKRNP 73
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Frame = +2
Query: 527 PVVPPVSCWTPATVSPT------PCPSTKDTHSPTPSLRLDLSPVATSQTTLMKI 673
P P + TP T +PT P P T +PTP+ +P T+ L+ I
Sbjct: 102 PTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPTTFILLLSI 156
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 470 TFNTPAMYVAIQACSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHS-PTPSLRLDLSPVA 646
T TP + A + P P + TP SPT ST T + PTP+ SP A
Sbjct: 9 TLTTPTLTKATPQTT--PTPTKPTPTTHTPTKPSPTTPTSTAPTQTTPTPTTP---SPTA 63
Query: 647 TSQTT 661
+QTT
Sbjct: 64 PTQTT 68
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/61 (29%), Positives = 22/61 (36%)
Frame = +2
Query: 479 TPAMYVAIQACSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSLRLDLSPVATSQT 658
TP Q T P + TP +PTP T T +PT S +P T
Sbjct: 43 TPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPTP 102
Query: 659 T 661
T
Sbjct: 103 T 103
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/65 (26%), Positives = 24/65 (36%)
Frame = +2
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTPATVSPTPCPSTK 595
A P A + + +NTP I + P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMP--PISSTPYQAPPTLPPTTLTTPSWSQPVPVPSMY 945
Query: 596 DTHSP 610
P
Sbjct: 946 QPQPP 950
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = -1
Query: 396 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASS--PNKSPSVPYRPS 223
CS + + C + ++V CS + V + ++C+ P++ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 222 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 130
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_45921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 563 TVSPTPCPSTKDT--HSPTPSLRLDLSPVATSQTTLMKILTERRLLVHYHPPNGEI 724
T +P PS T H P ++ L L+P+ SQ L I T RLL P +G I
Sbjct: 19 TCTPVILPSISCTPVHPPPNAIVLTLTPLKKSQVYLTWIRTLARLLEKRSPYHGAI 74
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 281 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.1 bits (62), Expect = 4.4
Identities = 29/103 (28%), Positives = 35/103 (33%), Gaps = 5/103 (4%)
Frame = +2
Query: 356 HTFYNELRVAP--EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRP 529
HT N AP HP L P+A +T M + S T P
Sbjct: 276 HTISNPAMAAPWVTPHPATLPVTLFTPQA--APVTPPMGAQLPETEQPQMVAPSSTVTPP 333
Query: 530 VV---PPVSCWTPATVSPTPCPSTKDTHSPTPSLRLDLSPVAT 649
V PP S P PTP + +P PS+ S V T
Sbjct: 334 VTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPT 376
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 281 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 281 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 281 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1994
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 512 SRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSLRLDLSPVATS 652
S +P V P S + +++ TP +T + P+PSL L S A+S
Sbjct: 1050 SASVQPSVTPASTKS-VSLTATPATTTSEVLEPSPSLTLSSSEAASS 1095
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 281 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 281 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 281 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 281 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 28.7 bits (61), Expect = 5.8
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Frame = +2
Query: 521 TRPVVPPVSCWTPATVS--PTPC--PSTKDTHSPT-PSLRLDLSPVATSQTTLMK----- 670
T+P PP + P S PTP P T+ ++ PT P L D + + +S TTL+
Sbjct: 526 TQPYYPPPQPYPPTQPSYPPTPSSYPPTQPSYPPTAPFLSAD-TTLLSSDTTLLSPDSTL 584
Query: 671 ILTERRLLVHYH 706
++ R LL+ H
Sbjct: 585 LILRRNLLILRH 596
>SB_634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Frame = +2
Query: 389 EEHPVLLTEAPLNPKANREKMTQIMFETF--NTPAMYVAIQACSRCTRPVVPPVSCWTPA 562
E P + EA P+ R Q F F P + C RC PP + W +
Sbjct: 43 EAPPAVPVEAAAGPRPRRSGPQQDNFGGFAQRVPRHQEILSCCCRCCVKPHPPFASWRNS 102
Query: 563 TVSPTPCPS 589
+ T PS
Sbjct: 103 EEARTDRPS 111
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -2
Query: 263 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 147
H++ + ++SH +HH ++ + +HG R + SCE+ L
Sbjct: 470 HIITKNIVSHLEHHDILY-----KFQHGFRKLRSCESQL 503
>SB_43523| Best HMM Match : GRP (HMM E-Value=0.013)
Length = 446
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -1
Query: 660 VVCEVATGLKSRRKDGVGECVSFVDGHGVGDTVAGVQHDTGGTT 529
V+ V TG ++ DG G DG GVG G HD GG T
Sbjct: 249 VLVVVMTGGETGHDDGDGSGHDDGDGSGVGFRNDGDGHDGGGET 292
>SB_38097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1099
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 568 VSHTVPIYEGYALPHAILASGLKPGRDLTDYPHED 672
++H Y+ Y + + A+G+KP L Y H+D
Sbjct: 454 LAHNFKGYDSYFILEYLFANGIKPKEALATYCHQD 488
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +2
Query: 410 TEAP---LNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTPATVSPTP 580
T+AP L PK T + ET + PA+ +A + + V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 581 CPSTKDTHSP 610
+T+ T +P
Sbjct: 575 TAATEITAAP 584
>SB_52813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 28.3 bits (60), Expect = 7.6
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = +2
Query: 356 HTFYNELRVAPEE-HPVLLTEAPLNP-KANREKMTQIMFETFNTPAMYVAIQACSRCTRP 529
H+ + + P E P+ T + ++P K +++ I ET TP + I+ P
Sbjct: 177 HSEVSPIETIPSEVSPIETTPSVVSPIKTTPSEVSPI--ET--TPFDVLPIKTTHTDVSP 232
Query: 530 VVPPVSCWTPATVSPTPCPSTKDTHSPTPSL---RLDLSPVATSQT 658
+ S +P +P+ K THS + R D+SP+ T+ T
Sbjct: 233 IETTPSEVSPIETTPSEVSPIKTTHSEVSPIKTTRTDVSPIETTPT 278
>SB_50338| Best HMM Match : TNFR_c6 (HMM E-Value=1.4e-05)
Length = 374
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 572 PTPCPSTKDTHSPTPSLRLDLSPVATSQTTLMKILTERR 688
P P P+ K T P P L L P T+ + TE R
Sbjct: 156 PIPTPTAKPTSKPMPQLPLTSPPSTTTPSMPANHTTENR 194
>SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24)
Length = 1575
Score = 28.3 bits (60), Expect = 7.6
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = -1
Query: 606 ECVSFVDGHGVGDTVAGVQHDTGGTTGRVQREQAWMATYMAGVLNVSNMIWVIFSLLALG 427
+CVSF D +T GVQ GG G V+R++ +VS+ V++ L
Sbjct: 69 DCVSFEDPFTGVETPLGVQQGGGGGGGGVKRKR--------DPEDVSDKDDVVYELRQTS 120
Query: 426 LRGASVSRTGCS 391
+ ++ RT CS
Sbjct: 121 TKRSTKMRTNCS 132
>SB_33386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 75
Score = 28.3 bits (60), Expect = 7.6
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = +2
Query: 485 AMYVAIQACSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSLRLDLSPVATSQTTL 664
A + ++ S+ R + + +TP T+ P S HSP + L L+P+ S L
Sbjct: 2 AQWYGLRFSSKRARVRIQRLPAFTPVTM---PFISCTPVHSPPNATVLTLTPLKKSLVDL 58
Query: 665 MKILTERRLLVHYHP 709
I T RLL P
Sbjct: 59 TWIRTLARLLEKRSP 73
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 512 SRCTRPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 619
+R P+ PP C + V PTP S+K + SP+PS
Sbjct: 327 TRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 521 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSLRLDLSPVATSQTT 661
T PPV+ TP T T P+TK T + P+ +P AT TT
Sbjct: 6106 TSTTEPPVT--TPTTAPTTTPPTTKQTTTQLPA--TTKAPTATKPTT 6148
>SB_23472| Best HMM Match : HIT (HMM E-Value=0.43)
Length = 168
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 263 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 44 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 80
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 190 GNTARGASSPAKPALHIPEPLSTT 119
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028)
Length = 252
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 263 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 89 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 125
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 190 GNTARGASSPAKPALHIPEPLSTT 119
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 418 SPQPQGQQREDDPDHVRNIQHARHVRRHPS 507
SP P+ R D+P V A HV HPS
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPS 294
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 512 SRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSLRLDLSPVATSQTT 661
+R T P P + PAT +PT +T + TP+ +P AT+ T
Sbjct: 42 NRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPT 90
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 491 YVAIQACSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSLR 625
Y + CSR T P V T +T T +T T + TP+ R
Sbjct: 614 YPHLVDCSRPTTPPVTTTKSTTSSTTKGTTASTTTSTPTTTPTTR 658
>SB_42341| Best HMM Match : DUF701 (HMM E-Value=3)
Length = 651
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/80 (22%), Positives = 31/80 (38%)
Frame = +2
Query: 323 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 502
TN+ + +W H + P V L + + P N E + ++ F +
Sbjct: 496 TNFSESRCVWLHKEEQQTTHRPSRQVVTLVDYAVCPFVNHEVLVKVHL-LFEERCAVLVG 554
Query: 503 QACSRCTRPVVPPVSCWTPA 562
+C R RP P+ +PA
Sbjct: 555 GSCRRGCRPRRAPLVALSPA 574
>SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 274
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 521 TRPVVPPVSCWTPATVSPTPCPS-TKDTHSPTPSLRLDLSPVA--TSQTTLMKILTERRL 691
T P + PV+ TP+T + P + +K+T SP + SP A +++ + L RRL
Sbjct: 194 TSPAIQPVAPATPSTTTTAPSTADSKETTSPLVPEAVGASPEAADSAEDEASQELRRRRL 253
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 263 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 673 HIIFHDIMNHIDTHNILV-----KFQHGFRRFFSCETQLITT 709
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 263 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 292 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 328
>SB_12041| Best HMM Match : PHD (HMM E-Value=0.001)
Length = 560
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 263 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 503 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 539
>SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 979
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 263 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 138
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 129 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 165
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,628,458
Number of Sequences: 59808
Number of extensions: 716547
Number of successful extensions: 3149
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 2532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3096
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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