Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1346
         (781 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.68 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   3.6  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.4  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 81  KTGNKVR*NLIRSFCFGIV 25
           +TG KV  ++ ++FCFG +
Sbjct: 516 QTGGKVETSICKNFCFGFI 534


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 319 YIVLTWQRCGSRTNEQFLFRIRHP 390
           +I L WQ+  + T  + L+  R P
Sbjct: 21  FIYLYWQQTSNLTTSKLLYTYRQP 44


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 464 LYADIDAAWQALRTRMALV 520
           L+   DA W+ LRT+++ V
Sbjct: 115 LFISKDAVWRNLRTKLSPV 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,332
Number of Sequences: 336
Number of extensions: 4077
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)