Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1346
         (781 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    25   3.5  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   8.0  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   8.0  
AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    23   8.0  

>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 663 LVFSMHFPVLTKIPKVTSSSSWGFMGTR 746
           +VF + F ++  +  VTS + W F G R
Sbjct: 210 IVFVVPFTIIVVLNSVTSFTVWRFAGLR 237


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = +3

Query: 549  HWNCTNSRFGSAL---*SWSCSVTFALNVRNASSISKHQENLVFSMHFPVLTKIPKVTSS 719
            HW C +S FG+ +     +S ++  A +  NA+S  ++Q    F   F  +  I  +   
Sbjct: 850  HWLCNHSTFGNIILVCIMFSSAMLAAEDPLNANS-ERNQILNYFDYFFTSVFTIELLLKL 908

Query: 720  SSWGFM 737
             S+GF+
Sbjct: 909  VSYGFL 914


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +1

Query: 490 ASVTNPNGIS-PENIILYGQSIGTVP 564
           +S+ N N ++ P N +L G   GTVP
Sbjct: 457 SSINNNNNVTIPNNNLLTGGGPGTVP 482


>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 26  TIPKQNERIKFQRTLLPVLLSAMPKKNCGQV 118
           T P ++E  +F  TLLP+L SA  K +  ++
Sbjct: 85  TKPIRDELRRFGGTLLPLLNSAQVKTDAAEL 115


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 806,918
Number of Sequences: 2352
Number of extensions: 15845
Number of successful extensions: 127
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)