Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1346
(781 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75712-10|CAB00039.2| 332|Caenorhabditis elegans Hypothetical p... 99 2e-21
AC024857-2|AAK31567.2| 463|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z95559-9|CAI46625.1| 510|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z81493-7|CAE46664.1| 342|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z81493-8|CAB04043.1| 305|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z81061-3|CAB02933.1| 232|Caenorhabditis elegans Hypothetical pr... 31 0.92
U00032-12|AAA50629.1| 482|Caenorhabditis elegans Hypothetical p... 31 1.2
Z81493-6|CAB04038.1| 335|Caenorhabditis elegans Hypothetical pr... 29 2.8
U55363-8|AAA97966.1| 829|Caenorhabditis elegans Germinal center... 29 4.9
Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical pr... 28 8.6
>Z75712-10|CAB00039.2| 332|Caenorhabditis elegans Hypothetical
protein K04G2.2 protein.
Length = 332
Score = 99 bits (238), Expect = 2e-21
Identities = 44/83 (53%), Positives = 57/83 (68%)
Frame = +2
Query: 269 NKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIFXXXXXXXXXXXXK 448
N++AC +R PN+ FT+LFSHGNAVDLGQM+SF GLG +NCN+F K
Sbjct: 98 NRVACTMIRPLPNSHFTLLFSHGNAVDLGQMTSFLYGLGFHLNCNVFSYDYSGYGCSTGK 157
Query: 449 PSEKNLYADIDAAWQALRTRMAL 517
PSEKNLYADI AA++ L++ +
Sbjct: 158 PSEKNLYADITAAFELLKSEFGV 180
Score = 95.1 bits (226), Expect = 5e-20
Identities = 50/89 (56%), Positives = 60/89 (67%)
Frame = +1
Query: 511 GISPENIILYGQSIGTVPTVDLAVRYEVGAVVLHSPLMSGMRVAFPNTKRTWFFRCISQY 690
G+ E IILYGQSIGTVP+VDLA R ++ A+VLHSPLMSGMRVAFP T TW
Sbjct: 179 GVPKEKIILYGQSIGTVPSVDLASREDLAALVLHSPLMSGMRVAFPGTTTTWCCDAFPSI 238
Query: 691 *QKYPKLLLPVLGDSWEPEDEVIDFFHGL 777
+K P++ P L +DEVIDF HG+
Sbjct: 239 -EKVPRVKCPTL-VIHGTDDEVIDFSHGV 265
Score = 36.3 bits (80), Expect = 0.025
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 105 IAAKLAFLPPEPTYAFTPDETGSKFSLTLTE-RAEWQYSEREKEN 236
I +KLAF+PPEP+Y T D L L E RA W + E + N
Sbjct: 46 IVSKLAFMPPEPSYTITEDN-----KLVLIEGRAAWPHQEVDMAN 85
>AC024857-2|AAK31567.2| 463|Caenorhabditis elegans Hypothetical
protein Y71G12A.4 protein.
Length = 463
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +1
Query: 511 GISPENIILYGQSIGTVPTVDLAVRYEVGAVVLHSPLMSGMRVAF--PNTKRTWF 669
G S + IIL G S+GT V +A Y+V AVVL +P S R+ P+ R WF
Sbjct: 282 GYSQDKIILIGFSLGTAAMVHVAEMYKVAAVVLIAPFTSFFRIVCRRPSIIRPWF 336
>Z95559-9|CAI46625.1| 510|Caenorhabditis elegans Hypothetical
protein Y41E3.18 protein.
Length = 510
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Frame = +2
Query: 269 NKIACLFVRCSPN--ARFTILFSHGNAVDLGQMSSFYLGLGTRIN------CNIFXXXXX 424
NKI C++V C RFT+L+SH N DL S +G+ + I+ C ++
Sbjct: 252 NKIGCVYVGCPDGFAPRFTLLYSHPNGSDL---SDHLIGIPSLIDIARFYRCEVYSYDYT 308
Query: 425 XXXXXXXKPSEKNLYADIDAAWQ 493
SE NLY+DI A ++
Sbjct: 309 GYGISGGIASESNLYSDIQAIYE 331
>Z81493-7|CAE46664.1| 342|Caenorhabditis elegans Hypothetical
protein F01D5.7b protein.
Length = 342
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +1
Query: 523 ENIILYGQSIGTVPTVDLAVRY--EVGAVVLHSPLMSGMRVAF--PNTKRTWF 669
+ I++ G SIGT VDLA + VVL +PL S +R+ P+ + TW+
Sbjct: 193 KKIVVIGYSIGTTAAVDLAASNPDRLVGVVLIAPLTSALRMFCNNPDKETTWW 245
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 13/86 (15%)
Frame = +2
Query: 290 VRCSPN--------ARFTILFSHGNAVDLGQM----SSFYLGLGTRINCNIFXXXXXXXX 433
V+CSPN A +LF ++ DLG S + +++
Sbjct: 105 VKCSPNCYSKNPEVANQVVLFCQSSSADLGSFLQPNSMNFSTFANLFETDVYAFDYSGYG 164
Query: 434 XXXXKPSEKNLYADIDAAWQ-ALRTR 508
SEKN+YAD+ A ++ L+TR
Sbjct: 165 FSSGTQSEKNMYADVRAVYEHILKTR 190
>Z81493-8|CAB04043.1| 305|Caenorhabditis elegans Hypothetical
protein F01D5.8 protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.70
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 523 ENIILYGQSIGTVPTVDLAVRY--EVGAVVLHSPLMSGMRV 639
+ I++ G SIGT VDLA + VVL +P SG+R+
Sbjct: 150 KKIVVMGYSIGTTAAVDLAATNPDRLAGVVLIAPFTSGLRL 190
>Z81061-3|CAB02933.1| 232|Caenorhabditis elegans Hypothetical
protein F14H8.4 protein.
Length = 232
Score = 31.1 bits (67), Expect = 0.92
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 56 FQRTLLPVLLSAMPKKNCGQVSISASRTNVCI 151
F RT PVL +A+PK N + I+AS T+ I
Sbjct: 187 FHRTFCPVLTNAIPKPNAPPMRIAASPTSAQI 218
>U00032-12|AAA50629.1| 482|Caenorhabditis elegans Hypothetical
protein F37A4.1 protein.
Length = 482
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 511 GISPENIILYGQSIGTVPTVDLAVRY-EVGAVVL 609
G ENI+L+G SIG P LA Y V AVVL
Sbjct: 289 GYRQENIVLFGWSIGGFPVAWLASNYPNVKAVVL 322
>Z81493-6|CAB04038.1| 335|Caenorhabditis elegans Hypothetical
protein F01D5.7a protein.
Length = 335
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 523 ENIILYGQSIGTVPTVDLAVRY--EVGAVVLHSPLMSGMRV 639
+ I++ G SIGT VDLA + VVL +PL S +R+
Sbjct: 193 KKIVVIGYSIGTTAAVDLAASNPDRLVGVVLIAPLTSALRM 233
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 13/86 (15%)
Frame = +2
Query: 290 VRCSPN--------ARFTILFSHGNAVDLGQM----SSFYLGLGTRINCNIFXXXXXXXX 433
V+CSPN A +LF ++ DLG S + +++
Sbjct: 105 VKCSPNCYSKNPEVANQVVLFCQSSSADLGSFLQPNSMNFSTFANLFETDVYAFDYSGYG 164
Query: 434 XXXXKPSEKNLYADIDAAWQ-ALRTR 508
SEKN+YAD+ A ++ L+TR
Sbjct: 165 FSSGTQSEKNMYADVRAVYEHILKTR 190
>U55363-8|AAA97966.1| 829|Caenorhabditis elegans Germinal center
kinase family protein2 protein.
Length = 829
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 190 SQNALSGNTQNVKKKTSKASTPNDEG 267
+Q A +GN++N TS ASTP+++G
Sbjct: 426 AQKAAAGNSKNRFSSTSIASTPSEDG 451
>Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical
protein F49E11.4 protein.
Length = 213
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 110 RNFSWAWRTTKQATKFAET*SVHFVSVLFVNTSIY 6
R SW+ + T ATKFAET + V+ SI+
Sbjct: 58 RKISWSKKLTNAATKFAETCPKNHSVVMNTGESIF 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,951,729
Number of Sequences: 27780
Number of extensions: 372844
Number of successful extensions: 969
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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