Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1346
         (781 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   4.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   9.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   9.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   9.7  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 392 FGCLILNKNCSFVRDPQRCHVR 327
           FG +  NKN S + D  RC ++
Sbjct: 193 FGVVYENKNGSVILDTARCSMK 214


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +1

Query: 418 LFGLWCKWREALRKELVC*HRCCVASVTN 504
           L G W       +  L C   CC AS+ N
Sbjct: 98  LLGKWIFGIHLCKLWLTCDVLCCTASILN 126


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +1

Query: 418 LFGLWCKWREALRKELVC*HRCCVASVTN 504
           L G W       +  L C   CC AS+ N
Sbjct: 98  LLGKWIFGIHLCKLWLTCDVLCCTASILN 126


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +1

Query: 418 LFGLWCKWREALRKELVC*HRCCVASVTN 504
           L G W       +  L C   CC AS+ N
Sbjct: 98  LLGKWIFGIHLCKLWLTCDVLCCTASILN 126


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,876
Number of Sequences: 438
Number of extensions: 4355
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)