Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1345
         (811 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    27   0.13 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    27   0.13 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    26   0.31 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.9  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   6.6  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.8  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +2

Query: 227 QILDDF--YYCMSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTALFY 364
           Q  DD   Y+ + +   FG VS Y+FI  F+YFF    I       FY
Sbjct: 218 QAADDLNRYFEVQVLTIFG-VSFYFFISTFFYFFTTGNIIATYDKQFY 264


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +2

Query: 227 QILDDF--YYCMSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTALFY 364
           Q  DD   Y+ + +   FG VS Y+FI  F+YFF    I       FY
Sbjct: 214 QAADDLNRYFEVQVLTIFG-VSFYFFISTFFYFFTTGNIIATYDKQFY 260


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -1

Query: 244 KVIQYLVKNGTPLYQSRNSDIFQDFLIISLAQTDLLLHST 125
           ++I YL KNG P       D++ D+   SLA  D +  ++
Sbjct: 391 EIITYLEKNGKPRTTDTFLDLWSDYQNKSLAAFDFVARNS 430


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 108 TDIYDIVLCNNKSVCANEIIRKSWKMS 188
           TD+ + VL N  + CA + ++ S  M+
Sbjct: 30  TDLVEYVLLNEDNPCARKCVKDSVPMT 56


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 281 VSPYYFILDFYYFFNQFQIW 340
           V P +F+L  YYF+  F I+
Sbjct: 137 VVPLFFLLCIYYFYCAFIIF 156


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 13  LLFNISSSVFTRNIMIIQFL*RNKK 87
           LLF I  S F+   +++QF   NKK
Sbjct: 353 LLFAICGSAFSYLFIMLQFDLNNKK 377


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/18 (44%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = -3

Query: 647 GKYIALNLVPNQND-TIT 597
           GK + + ++PN+ND T+T
Sbjct: 66  GKELYIKIIPNKNDGTLT 83


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 539 TGNLTSNPMINSTPN*TKACRNSQ 468
           T  L  NP ++S     +ACR  +
Sbjct: 93  TAELLKNPSLSSPDECARACREGE 116


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 539 TGNLTSNPMINSTPN*TKACRNSQ 468
           T  L  NP ++S     +ACR  +
Sbjct: 93  TAELLKNPSLSSPDECARACREGE 116


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 537 SINGPDGTLGIICMVS 584
           S + P GTLG IC ++
Sbjct: 245 SCSCPSGTLGYICEIN 260


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,889
Number of Sequences: 336
Number of extensions: 5127
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)