Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1336
         (719 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4RHG4 Cluster: Putative uncharacterized protein; n=1; ...    35   1.8  
UniRef50_O65246 Cluster: F21E10.8 protein; n=2; Arabidopsis thal...    33   5.4  
UniRef50_Q6WHF4 Cluster: Gp13; n=1; Vibrio phage KVP40|Rep: Gp13...    33   5.4  
UniRef50_Q095H2 Cluster: Xyppx repeat family; n=1; Stigmatella a...    33   7.1  
UniRef50_A7BZR1 Cluster: Type II DNA modification enzyme; n=2; B...    33   9.4  
UniRef50_Q5KAF9 Cluster: Map kinase kinase kinase mkh1, putative...    33   9.4  

>UniRef50_A4RHG4 Cluster: Putative uncharacterized protein; n=1;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 1301

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 21/71 (29%), Positives = 36/71 (50%)
 Frame = +2

Query: 242 TYKAQDSMKVVGPLGRRGADTTLRRSWSDPSSRVPERRDIGNSDNYSAPNLYSLFPPARQ 421
           T + Q +  +   +G+   D T+ R   D  +R P+RR+  NS N ++P+  S+ P + Q
Sbjct: 88  TEEGQPNQSISFAIGQ--IDATIDRPLPDKVARTPQRRNTINSTNSTSPDTKSISPKSSQ 145

Query: 422 ASSPEPRSPLA 454
                P +P A
Sbjct: 146 -DGQAPETPTA 155


>UniRef50_O65246 Cluster: F21E10.8 protein; n=2; Arabidopsis
           thaliana|Rep: F21E10.8 protein - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 301

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 440 EVLVNWLVWPVGITNTN*VLNNYRYCRCHVFQ 345
           +V+  WL+W +   + N VLNNYR C   V Q
Sbjct: 88  KVIHFWLIWKIWKAHNNLVLNNYRECPSMVIQ 119


>UniRef50_Q6WHF4 Cluster: Gp13; n=1; Vibrio phage KVP40|Rep: Gp13 -
           Bacteriophage KVP40
          Length = 307

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 299 DTTLRRSWSDPSSRVPERRDIGNSDNYSAPNLYSL 403
           DTT +  W DP S + +   IGN + ++  N YS+
Sbjct: 208 DTTAQERWDDPYSILRQNNTIGNPNQFAEQNAYSV 242


>UniRef50_Q095H2 Cluster: Xyppx repeat family; n=1; Stigmatella
           aurantiaca DW4/3-1|Rep: Xyppx repeat family -
           Stigmatella aurantiaca DW4/3-1
          Length = 1352

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 19/63 (30%), Positives = 32/63 (50%)
 Frame = +2

Query: 317 SWSDPSSRVPERRDIGNSDNYSAPNLYSLFPPARQASSPEPRSPLALEISSEIVTSMNGH 496
           SW +P++  PE   +G+ D    P+L    P A +A  PEP++  A E +    + ++  
Sbjct: 275 SWQEPAA-APESIQLGSED-VDIPSLSGPAPWATEAQPPEPQAAAAEEFADADASEVSSA 332

Query: 497 RDL 505
            DL
Sbjct: 333 DDL 335


>UniRef50_A7BZR1 Cluster: Type II DNA modification enzyme; n=2;
           Bacteria|Rep: Type II DNA modification enzyme -
           Beggiatoa sp. PS
          Length = 463

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
 Frame = +2

Query: 311 RRSWSDPSSRVPERRDIGN--SDNYSAPNLYSLFPPARQASSPEPRSPLALEISSEIVTS 484
           R  + D +S   ER  I          P+  SL   A+ + SP+ R  L    +S +V  
Sbjct: 284 RLGFRDVASSTNERTMIATVLPPKIFCPHTMSLEMVAQSSLSPKERIFLVALFNSYLVDY 343

Query: 485 M-----NGHRDLE*SYSRPRPRL*TPTDASFSQIKSESAVNRCTVERYD 616
           +       H      Y+ P PRL T TDA+F+ I + +A   CT   +D
Sbjct: 344 LIRQRITAHLSFFFVYNLPIPRL-TKTDAAFTPIVTRAAQLICTTPEFD 391


>UniRef50_Q5KAF9 Cluster: Map kinase kinase kinase mkh1, putative;
           n=1; Filobasidiella neoformans|Rep: Map kinase kinase
           kinase mkh1, putative - Cryptococcus neoformans
           (Filobasidiella neoformans)
          Length = 1764

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 29/104 (27%), Positives = 42/104 (40%)
 Frame = +2

Query: 335 SRVPERRDIGNSDNYSAPNLYSLFPPARQASSPEPRSPLALEISSEIVTSMNGHRDLE*S 514
           S V +     +   YSAP  Y    P R AS  +  SP        I+++  GHR+   S
Sbjct: 213 SPVSQSPSTSHGQPYSAPPAYHPHDPTRVASPDDVMSPATGSEHGSIMSAGIGHRNRSAS 272

Query: 515 YSRPRPRL*TPTDASFSQIKSESAVNRCTVERYDFKVNSAVK*R 646
               + RL   TD     +   + +N  T E    KV S ++ R
Sbjct: 273 VQGQQVRLQVTTDNEAFHLVDITGIN--TAEGIREKVFSKLRIR 314


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,560,728
Number of Sequences: 1657284
Number of extensions: 13833018
Number of successful extensions: 41221
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 38667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40968
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)