Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1336
         (719 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           24   4.1  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   4.1  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   5.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   7.2  
AY745208-1|AAU93475.1|  103|Anopheles gambiae cytochrome P450 pr...    23   7.2  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
 Frame = +2

Query: 419  QASSPEPRSPLALEISSEIVTSMNGHRDLE*SYSRPRPRL*T---PTDASFSQI-KSESA 586
            ++ SPE R+ L   ++      + G R L+ S     PRL T     D     + K+ + 
Sbjct: 806  ESYSPEMRAQLLQFVTGSCRVPLQGFRALQGSTGAVGPRLFTIHLTADVPLQNLPKAHTC 865

Query: 587  VNRCTVERYD 616
             NR  +  YD
Sbjct: 866  FNRLDLPMYD 875


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +2

Query: 293 GADTTLRRSWSDPSSRVPERRDIGNSDNYSAPNLYSLFP---PARQASSPEPRSPLALEI 463
           GA     RS S   S  P    +G  + ++   + S      P   A+SP P+  LA  +
Sbjct: 35  GAGVRAERSISGTESTKPVPTVLGGPNLFAPSAVSSQLQRPQPTVLAASPAPQPSLAPVV 94

Query: 464 SSEIVTS 484
            S +VT+
Sbjct: 95  PSSVVTA 101


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 472 NCYVHEWSPRLGIKLFSTSPPAM 540
           +C++H W+  LG K+     PA+
Sbjct: 567 HCWIHPWTELLGPKMEGNIYPAI 589


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +2

Query: 380  SAPNLYSLFPPARQASSPEPRSPLALEISSEIVTSMN 490
            +AP      PPA  A+S     P    ++S  VTS+N
Sbjct: 934  AAPTQQQPLPPAPAAASSAGVQPTEHSVNSTNVTSIN 970


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 177 GQIWDADSIADLLDENSSGDF 239
           G I+D+   +D+L  NSSG F
Sbjct: 241 GNIFDSTEYSDMLHLNSSGMF 261


>AY745208-1|AAU93475.1|  103|Anopheles gambiae cytochrome P450
           protein.
          Length = 103

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 532 PAMNSDRRFFFADKK*KCREQMYSRALRF 618
           P +++DR  FF   K +C  ++ +RA  F
Sbjct: 74  PHLHTDRLMFFGIGKRRCLGEVLARACLF 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,754
Number of Sequences: 2352
Number of extensions: 14127
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)