Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1336
         (719 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070899-1|AAL48521.1|  584|Drosophila melanogaster RE01338p pro...    30   3.6  
AE014297-3497|AAF56257.1|  584|Drosophila melanogaster CG17786-P...    30   3.6  
AE014297-2085|AAN13677.1| 1570|Drosophila melanogaster CG4699-PC...    29   4.8  
AE014297-2084|AAF55225.1| 1570|Drosophila melanogaster CG4699-PB...    29   4.8  
AE014297-2083|AAF55226.1| 1570|Drosophila melanogaster CG4699-PA...    29   4.8  

>AY070899-1|AAL48521.1|  584|Drosophila melanogaster RE01338p
           protein.
          Length = 584

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 150 CQCRLCDPVGQIWDADSIADLLDENSS 230
           C CR CDP+  +WD      L D +SS
Sbjct: 285 CFCRECDPLRSLWDYPLRRSLSDASSS 311


>AE014297-3497|AAF56257.1|  584|Drosophila melanogaster CG17786-PA
           protein.
          Length = 584

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 150 CQCRLCDPVGQIWDADSIADLLDENSS 230
           C CR CDP+  +WD      L D +SS
Sbjct: 285 CFCRECDPLRSLWDYPLRRSLSDASSS 311


>AE014297-2085|AAN13677.1| 1570|Drosophila melanogaster CG4699-PC,
           isoform C protein.
          Length = 1570

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 20/87 (22%), Positives = 34/87 (39%)
 Frame = +2

Query: 332 SSRVPERRDIGNSDNYSAPNLYSLFPPARQASSPEPRSPLALEISSEIVTSMNGHRDLE* 511
           S  +  +R  GN+   + P   S  P     +SP P +  A   +S +  + N       
Sbjct: 77  SLAINNKRKSGNAKASNEPMGLSTAPTPHSTTSPNPSTDTAAASTSAVEHNNNDSNSTSA 136

Query: 512 SYSRPRPRL*TPTDASFSQIKSESAVN 592
             S       TP D S +Q+ ++  +N
Sbjct: 137 GNSTSADNSSTPKDNSTAQLLADLTIN 163


>AE014297-2084|AAF55225.1| 1570|Drosophila melanogaster CG4699-PB,
           isoform B protein.
          Length = 1570

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 20/87 (22%), Positives = 34/87 (39%)
 Frame = +2

Query: 332 SSRVPERRDIGNSDNYSAPNLYSLFPPARQASSPEPRSPLALEISSEIVTSMNGHRDLE* 511
           S  +  +R  GN+   + P   S  P     +SP P +  A   +S +  + N       
Sbjct: 77  SLAINNKRKSGNAKASNEPMGLSTAPTPHSTTSPNPSTDTAAASTSAVEHNNNDSNSTSA 136

Query: 512 SYSRPRPRL*TPTDASFSQIKSESAVN 592
             S       TP D S +Q+ ++  +N
Sbjct: 137 GNSTSADNSSTPKDNSTAQLLADLTIN 163


>AE014297-2083|AAF55226.1| 1570|Drosophila melanogaster CG4699-PA,
           isoform A protein.
          Length = 1570

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 20/87 (22%), Positives = 34/87 (39%)
 Frame = +2

Query: 332 SSRVPERRDIGNSDNYSAPNLYSLFPPARQASSPEPRSPLALEISSEIVTSMNGHRDLE* 511
           S  +  +R  GN+   + P   S  P     +SP P +  A   +S +  + N       
Sbjct: 77  SLAINNKRKSGNAKASNEPMGLSTAPTPHSTTSPNPSTDTAAASTSAVEHNNNDSNSTSA 136

Query: 512 SYSRPRPRL*TPTDASFSQIKSESAVN 592
             S       TP D S +Q+ ++  +N
Sbjct: 137 GNSTSADNSSTPKDNSTAQLLADLTIN 163


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,962,459
Number of Sequences: 53049
Number of extensions: 669183
Number of successful extensions: 1885
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1885
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)