Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1334
(421 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46781 Cluster: 40S ribosomal protein S9; n=181; Eukary... 126 2e-28
UniRef50_UPI0000501C59 Cluster: UPI0000501C59 related cluster; n... 70 2e-11
UniRef50_O15612 Cluster: 40S ribosomal protein S9; n=2; Entamoeb... 64 8e-10
UniRef50_Q0D4G1 Cluster: Os07g0628300 protein; n=2; Oryza sativa... 59 3e-08
UniRef50_A5BPM7 Cluster: Putative uncharacterized protein; n=1; ... 54 9e-07
UniRef50_Q3LWD1 Cluster: Ribosomal protein S9; n=1; Bigelowiella... 54 2e-06
UniRef50_Q6CM19 Cluster: Similarity; n=2; Saccharomycetaceae|Rep... 52 6e-06
UniRef50_Q8SRW6 Cluster: 40S RIBOSOMAL PROTEIN S9; n=1; Encephal... 47 2e-04
UniRef50_P54020 Cluster: 30S ribosomal protein S4P; n=12; Archae... 46 2e-04
UniRef50_Q9SZ81 Cluster: Putative ribosomal protein; n=1; Arabid... 45 5e-04
UniRef50_Q10KL6 Cluster: 40S ribosomal protein S9, putative; n=5... 45 7e-04
UniRef50_Q9HQJ6 Cluster: 30S ribosomal protein S4P; n=3; Halobac... 45 7e-04
UniRef50_Q96YV8 Cluster: 30S ribosomal protein S4P; n=2; Sulfolo... 44 0.002
UniRef50_Q8ZTV1 Cluster: 30S ribosomal protein S4P; n=5; Thermop... 43 0.003
UniRef50_A6UW05 Cluster: Ribosomal protein S4; n=1; Methanococcu... 42 0.007
UniRef50_A7QT43 Cluster: Chromosome undetermined scaffold_165, w... 41 0.012
UniRef50_Q8PV18 Cluster: 30S ribosomal protein S4P; n=8; Euryarc... 40 0.027
UniRef50_Q74NF7 Cluster: 30S ribosomal protein S4P; n=5; Archaea... 38 0.063
UniRef50_Q2NFZ4 Cluster: 30S ribosomal protein S4P; n=3; Methano... 38 0.063
UniRef50_Q0W1V5 Cluster: 30S ribosomal protein S4P; n=1; uncultu... 38 0.11
UniRef50_A5AVE2 Cluster: Putative uncharacterized protein; n=1; ... 37 0.14
UniRef50_Q2FT97 Cluster: 30S ribosomal protein S4P; n=2; Methano... 36 0.25
UniRef50_A0SNY6 Cluster: Ribosomal protein small subunit S9; n=1... 36 0.44
UniRef50_Q97B95 Cluster: 30S ribosomal protein S4P; n=5; Archaea... 36 0.44
UniRef50_Q011L4 Cluster: Chromosome 09 contig 1, DNA sequence; n... 35 0.77
UniRef50_Q9N4U3 Cluster: Putative uncharacterized protein; n=2; ... 33 3.1
UniRef50_A7RWV6 Cluster: Predicted protein; n=1; Nematostella ve... 32 4.1
UniRef50_A7IAH7 Cluster: Ribosomal protein S4; n=1; Candidatus M... 32 5.4
UniRef50_Q4AEQ5 Cluster: Ribosomal protein S4:RNA-binding S4; n=... 31 7.2
UniRef50_Q6CEW2 Cluster: Yarrowia lipolytica chromosome B of str... 31 9.5
>UniRef50_P46781 Cluster: 40S ribosomal protein S9; n=181;
Eukaryota|Rep: 40S ribosomal protein S9 - Homo sapiens
(Human)
Length = 194
Score = 126 bits (304), Expect = 2e-28
Identities = 74/120 (61%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = -1
Query: 418 KDPKRLFXGNALLXSS---GSYWSTXXKTDETRLCAWSED*GLLGASSADAGVQSWPGKS 248
KDP+RLF GNALL G K D L ED L + KS
Sbjct: 66 KDPRRLFEGNALLRRLVRIGVLDEGKMKLDYI-LGLKIED--FLERRLQTQVFKLGLAKS 122
Query: 247 IHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 68
IHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ
Sbjct: 123 IHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182
Score = 70.9 bits (166), Expect = 1e-11
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = -2
Query: 417 RTPRDCSKVMPFYXRLVRIGVLXXKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 256
+ PR + RLVRIGVL +MKLDY+LGLKIEDFLERRLQTQVFK GL
Sbjct: 66 KDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGL 119
>UniRef50_UPI0000501C59 Cluster: UPI0000501C59 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000501C59 UniRef100 entry -
Rattus norvegicus
Length = 199
Score = 69.7 bits (163), Expect = 2e-11
Identities = 35/62 (56%), Positives = 42/62 (67%)
Frame = -1
Query: 253 KSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRK 74
KSI HA +L+ HIR+ KQVV+I F V LDS KH DF GGG PG VKRKN++K
Sbjct: 126 KSIRHACVLLCHCHIRIGKQVVDIAFFFVGLDSRKHTDFFRHCLNGGGYPGSVKRKNVKK 185
Query: 73 GQ 68
G+
Sbjct: 186 GR 187
>UniRef50_O15612 Cluster: 40S ribosomal protein S9; n=2; Entamoeba
histolytica|Rep: 40S ribosomal protein S9 - Entamoeba
histolytica
Length = 185
Score = 64.5 bits (150), Expect = 8e-10
Identities = 43/118 (36%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = -1
Query: 418 KDPKRLFXGNALLXSSGSYWSTXXKTDETRLCAWSED*GLLGASSADAGVQSWPGKSIHH 239
KDPKRL G ALL + ++ ++ LL + KSIHH
Sbjct: 65 KDPKRLLEGAALLRRLHNLGILPRDQNKLEFVLALKEENLLERRLQTLVYRKGFAKSIHH 124
Query: 238 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGR-PGRVKRKNLRKGQ 68
AR+LIR + I+V KQVV++PSF+VR++S I + +P GR KRKN G+
Sbjct: 125 ARVLIRGKMIKVGKQVVDVPSFLVRVESEPLIQLADNTPLTNPEINGRRKRKNNHAGK 182
>UniRef50_Q0D4G1 Cluster: Os07g0628300 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os07g0628300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 94
Score = 59.3 bits (137), Expect = 3e-08
Identities = 29/41 (70%), Positives = 32/41 (78%)
Frame = -1
Query: 205 VRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKN 83
V +Q+VNIPSFIVRL+S KHI FSL SP GG RVKRKN
Sbjct: 27 VGRQLVNIPSFIVRLESEKHIAFSLTSPLGGSPAVRVKRKN 67
>UniRef50_A5BPM7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 103
Score = 54.4 bits (125), Expect = 9e-07
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = -1
Query: 181 PSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLR 77
PSF+VR+DS K D SL SP GGGRPGRVK+K+L+
Sbjct: 24 PSFLVRMDSRKRGDSSLTSPLGGGRPGRVKKKSLK 58
>UniRef50_Q3LWD1 Cluster: Ribosomal protein S9; n=1; Bigelowiella
natans|Rep: Ribosomal protein S9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 180
Score = 53.6 bits (123), Expect = 2e-06
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = -1
Query: 253 KSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKS 125
K+IH ARILI +HI+V+ Q+VN PSF+VR D+ I FSL S
Sbjct: 122 KTIHEARILIMHKHIQVKNQIVNKPSFLVRKDNEIFISFSLNS 164
>UniRef50_Q6CM19 Cluster: Similarity; n=2; Saccharomycetaceae|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 246
Score = 51.6 bits (118), Expect = 6e-06
Identities = 26/68 (38%), Positives = 44/68 (64%)
Frame = +2
Query: 65 TLSLAEVLPLDTSRTTSTEWRFQREVNVLARVQAHNK*WDVHNLLADTNMPLPDQNSGMM 244
T S + L ++ +++TEWR EVNVL R Q+ ++ WDV +LL ++N+ L DQ+S ++
Sbjct: 10 TTSSSSSLSGHSTWSSTTEWRGSSEVNVLLRFQSDHERWDVDDLLTNSNVSLGDQDSSVV 69
Query: 245 DGLXRPAL 268
+ L + L
Sbjct: 70 NRLGQTQL 77
Score = 32.3 bits (70), Expect = 4.1
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 256 QASFEHLRLQTTLQEVLNLQTKHIIEFHLFXXQYSNTNQTT 378
Q L LQ++ QE+ NLQ++ II+ L Q +N++Q++
Sbjct: 74 QTQLVDLGLQSSFQEIFNLQSQDIIQLLLVFRQDTNSHQSS 114
>UniRef50_Q8SRW6 Cluster: 40S RIBOSOMAL PROTEIN S9; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S9 -
Encephalitozoon cuniculi
Length = 184
Score = 46.8 bits (106), Expect = 2e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = -1
Query: 253 KSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFG 116
KS+HHAR+LI R I ++ Q+V++P F+VR D I+++ S +G
Sbjct: 125 KSVHHARLLIGGRCISIKDQIVDVPGFMVRADKEPLIEYNPYSRYG 170
Score = 31.9 bits (69), Expect = 5.4
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -2
Query: 333 LDYVLGLKIEDFLERRLQTQVFKAGL 256
L+ VL L I +LERRLQ +VF AGL
Sbjct: 98 LNKVLDLTINHYLERRLQFRVFAAGL 123
>UniRef50_P54020 Cluster: 30S ribosomal protein S4P; n=12;
Archaea|Rep: 30S ribosomal protein S4P - Methanococcus
jannaschii
Length = 187
Score = 46.4 bits (105), Expect = 2e-04
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = -2
Query: 417 RTPRDCSKVMPFYXRLVRIGVLXXKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 256
RT + + + + L + G+L + LD VL L +ED LERRLQT VF+ GL
Sbjct: 63 RTEQGAKEAVQLFNVLKKYGILKIENPTLDDVLSLTVEDILERRLQTLVFRKGL 116
Score = 33.5 bits (73), Expect = 1.8
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1
Query: 238 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFG-GGRPGRVK 92
AR LI HI V +VV PS++V ++ I ++ SPF P R K
Sbjct: 123 ARQLIVHGHIAVNGRVVTAPSYMVTVEEEDKISYAKNSPFNDDNHPERAK 172
>UniRef50_Q9SZ81 Cluster: Putative ribosomal protein; n=1;
Arabidopsis thaliana|Rep: Putative ribosomal protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 106
Score = 45.2 bits (102), Expect = 5e-04
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = -2
Query: 336 KLDYVLGLKIEDFLERRLQTQVFKAGL 256
KLDYVL L +E+FLERRLQT VFK+G+
Sbjct: 22 KLDYVLALTVENFLERRLQTIVFKSGM 48
>UniRef50_Q10KL6 Cluster: 40S ribosomal protein S9, putative; n=5;
Oryza sativa|Rep: 40S ribosomal protein S9, putative -
Oryza sativa subsp. japonica (Rice)
Length = 157
Score = 44.8 bits (101), Expect = 7e-04
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = -2
Query: 417 RTPRDCSKVMPFYXRLVRIGVLXXKQMKLDYVLGLKIEDFLERRLQTQVFKAG 259
+ PR + + R G+L Q KLDYVL L +E+FL+ RLQT VFK G
Sbjct: 56 KNPRRIFEGEALLRHMNRYGLLGEGQNKLDYVLALTVENFLQCRLQTIVFKNG 108
>UniRef50_Q9HQJ6 Cluster: 30S ribosomal protein S4P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S4P -
Halobacterium salinarium (Halobacterium halobium)
Length = 170
Score = 44.8 bits (101), Expect = 7e-04
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = -2
Query: 384 FYXRLVRIGVLXXKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 256
F RL RIG+L ++ +LD VL L++ D LERRLQT V++ GL
Sbjct: 70 FVARLQRIGILSEEE-RLDDVLSLEVTDVLERRLQTVVYREGL 111
>UniRef50_Q96YV8 Cluster: 30S ribosomal protein S4P; n=2;
Sulfolobaceae|Rep: 30S ribosomal protein S4P -
Sulfolobus tokodaii
Length = 177
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = -2
Query: 375 RLVRIGVLXXKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 256
+L R+G++ LD +LGL E++LERRLQT V+K GL
Sbjct: 76 KLYRMGIIEKDNATLDDILGLNEENYLERRLQTIVYKKGL 115
Score = 31.1 bits (67), Expect = 9.5
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 253 KSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRK 74
++I+ AR LI HI + + V P +IV IDF SPF P + +N+++
Sbjct: 117 RTIYQARQLIVHGHIAIGGRRVTSPGYIVMRGEEDLIDFYPTSPFKQHPPTQQGEENVQQ 176
>UniRef50_Q8ZTV1 Cluster: 30S ribosomal protein S4P; n=5;
Thermoproteaceae|Rep: 30S ribosomal protein S4P -
Pyrobaculum aerophilum
Length = 159
Score = 42.7 bits (96), Expect = 0.003
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = -2
Query: 390 MPFYXRLVRIGVLXXKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 256
MPF +L ++G + ++LD +L L + LERRLQT V++ GL
Sbjct: 73 MPFKEKLYKMGFIEDPNVQLDRILSLDVRAILERRLQTIVYRMGL 117
Score = 31.5 bits (68), Expect = 7.2
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -1
Query: 253 KSIHHARILIRQRHIRVRKQVVNIPSFIV 167
KSIHHAR LI H+ V + V P F+V
Sbjct: 119 KSIHHARQLIVHGHVAVAGRRVTSPGFLV 147
>UniRef50_A6UW05 Cluster: Ribosomal protein S4; n=1; Methanococcus
aeolicus Nankai-3|Rep: Ribosomal protein S4 -
Methanococcus aeolicus Nankai-3
Length = 177
Score = 41.5 bits (93), Expect = 0.007
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = -2
Query: 372 LVRIGVLXXKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 256
L R G+L + LD VL L +E LERRLQT VF+ GL
Sbjct: 77 LNRYGILLKEDATLDDVLSLNLESILERRLQTLVFRKGL 115
>UniRef50_A7QT43 Cluster: Chromosome undetermined scaffold_165,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_165, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 203
Score = 40.7 bits (91), Expect = 0.012
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = -1
Query: 220 QRHIRVRKQVVNIPSFI-----VRLDSGKHIDFSLKSPFGGGRPGRVKRKNLR 77
+R R R+ + IP + VR++ K IDFS GGGRPGRVKRK L+
Sbjct: 130 ERRYRGRRAFLVIPRVMGAPLSVRVEPQKLIDFSNTCLLGGGRPGRVKRKGLK 182
>UniRef50_Q8PV18 Cluster: 30S ribosomal protein S4P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S4P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 219
Score = 39.5 bits (88), Expect = 0.027
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = -2
Query: 375 RLVRIGVLXXKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 256
+L+R G++ +D +L LK E+ LERRLQTQV + GL
Sbjct: 85 KLIRYGIIKA-DANVDDILSLKTENILERRLQTQVLRLGL 123
>UniRef50_Q74NF7 Cluster: 30S ribosomal protein S4P; n=5;
Archaea|Rep: 30S ribosomal protein S4P - Nanoarchaeum
equitans
Length = 180
Score = 38.3 bits (85), Expect = 0.063
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = -2
Query: 384 FYXRLVRIGVLXXKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 256
F +L ++GVL + +LD VL L ++D LERRLQT + + GL
Sbjct: 72 FLTKLKKLGVLS-ENAELDDVLDLTVKDVLERRLQTMLVRKGL 113
Score = 31.1 bits (67), Expect = 9.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 253 KSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSP 122
K++ AR I HI V +VV+ PS++V+ + I+F SP
Sbjct: 115 KTMKQARQFIVHGHIMVNGEVVDAPSYLVKKEEEDKIEFVPFSP 158
>UniRef50_Q2NFZ4 Cluster: 30S ribosomal protein S4P; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 182
Score = 38.3 bits (85), Expect = 0.063
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = -2
Query: 372 LVRIGVLXXKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 256
LVR G + KL+ VL L +ED L RRLQ+ VFK GL
Sbjct: 77 LVRAGFISPNA-KLEEVLDLNVEDILRRRLQSLVFKRGL 114
>UniRef50_Q0W1V5 Cluster: 30S ribosomal protein S4P; n=1; uncultured
methanogenic archaeon RC-I|Rep: 30S ribosomal protein
S4P - Uncultured methanogenic archaeon RC-I
Length = 205
Score = 37.5 bits (83), Expect = 0.11
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = -2
Query: 375 RLVRIGVLXXKQMKLDYVLGLKIEDFLERRLQTQVFKAG 259
+L +G+L + KL+ VL LK++D +ERRLQT +++ G
Sbjct: 83 KLQTLGILK-EDAKLEDVLALKVDDIMERRLQTIIYRKG 120
>UniRef50_A5AVE2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 247
Score = 37.1 bits (82), Expect = 0.14
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -1
Query: 163 LDSGKHIDFSLKSPFGGGRPGRVKRKNLR 77
+DS KH DFSL SP G R +VKRK L+
Sbjct: 1 MDSRKHGDFSLTSPLGSSRLEKVKRKGLK 29
>UniRef50_Q2FT97 Cluster: 30S ribosomal protein S4P; n=2;
Methanomicrobiales|Rep: 30S ribosomal protein S4P -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 181
Score = 36.3 bits (80), Expect = 0.25
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -2
Query: 372 LVRIGVLXXKQMKLDYVLGLKIEDFLERRLQTQVFKAGL-XSPSIMPEF 229
L R G+L + +D VL LK+E L+RRLQTQV++ G SP +F
Sbjct: 82 LQRSGMLS-ENADIDDVLALKVEQQLDRRLQTQVYRRGFARSPKQARQF 129
>UniRef50_A0SNY6 Cluster: Ribosomal protein small subunit S9; n=1;
uncultured euryarchaeote ARMAN-2|Rep: Ribosomal protein
small subunit S9 - uncultured euryarchaeote ARMAN-2
Length = 187
Score = 35.5 bits (78), Expect = 0.44
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = -2
Query: 375 RLVRIGVLXXKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 256
R+V+ G+L L+ VL + FLERRLQT VFK GL
Sbjct: 74 RMVKFGILE-NGATLEKVLDITPNAFLERRLQTVVFKKGL 112
>UniRef50_Q97B95 Cluster: 30S ribosomal protein S4P; n=5;
Archaea|Rep: 30S ribosomal protein S4P - Thermoplasma
volcanium
Length = 200
Score = 35.5 bits (78), Expect = 0.44
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = -2
Query: 375 RLVRIGVLXXKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 256
RL R +L K LD VL L +E+ L+RRLQT VFK L
Sbjct: 79 RLSRYKILSDKAT-LDDVLSLTVENILDRRLQTIVFKKNL 117
>UniRef50_Q011L4 Cluster: Chromosome 09 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 09 contig 1, DNA
sequence - Ostreococcus tauri
Length = 293
Score = 34.7 bits (76), Expect = 0.77
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = +3
Query: 120 NGDFREKSMCLPESRRTINDGMFTTCLRTRICLCRIKILA 239
+G+ KSMC S RT G FT CL TRI RIK A
Sbjct: 58 SGELSAKSMCFWLSVRTKKLGTFTICLPTRIWRWRIKTRA 97
>UniRef50_Q9N4U3 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 382
Score = 32.7 bits (71), Expect = 3.1
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 184 CSQLACGHEYAFAGSKFWHDGW-TXQASFEHLRLQTTLQEVLNL 312
C + CG E+ F K WH+G T +FE L+ + T E+ +L
Sbjct: 152 CQRPGCGREFCFKCRKVWHEGTRTCSKTFEQLK-KITENEINDL 194
>UniRef50_A7RWV6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 739
Score = 32.3 bits (70), Expect = 4.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 263 LAWXVHPSCQNFDPAKAYSCPQASCEHPIIYCAP 162
L VHPSC + D + CP +CE P + C P
Sbjct: 134 LCGNVHPSCSDADGTSSSCCPPLTCE-PDMMCNP 166
>UniRef50_A7IAH7 Cluster: Ribosomal protein S4; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S4 -
Methanoregula boonei (strain 6A8)
Length = 185
Score = 31.9 bits (69), Expect = 5.4
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -2
Query: 333 LDYVLGLKIEDFLERRLQTQVFKAGL 256
+D VL LK+ LERRLQT V++ GL
Sbjct: 94 IDNVLALKVPAQLERRLQTLVYRKGL 119
>UniRef50_Q4AEQ5 Cluster: Ribosomal protein S4:RNA-binding S4; n=1;
Chlorobium phaeobacteroides BS1|Rep: Ribosomal protein
S4:RNA-binding S4 - Chlorobium phaeobacteroides BS1
Length = 134
Score = 31.5 bits (68), Expect = 7.2
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 238 ARILIRQRHIRVRKQVVNIPSF 173
AR L+ RHI V Q+VN+PSF
Sbjct: 111 ARQLVSHRHITVNGQIVNVPSF 132
>UniRef50_Q6CEW2 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 366
Score = 31.1 bits (67), Expect = 9.5
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = -1
Query: 385 LLXSSGSYWSTXXKT----DETRLCAWSED*GLLGASSADAGVQSWPGKS 248
LL + G ST KT +T +C WS D G L A + W GK+
Sbjct: 293 LLQTGGQVLSTSDKTTITASDTGICIWSTDTGDLLGKVATGATEMWVGKT 342
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,872,624
Number of Sequences: 1657284
Number of extensions: 7788195
Number of successful extensions: 20029
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20019
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19389441554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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