Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1334
(421 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-1680|AAN11946.1| 195|Drosophila melanogaster CG3395-PD... 127 5e-30
AE014296-1679|AAF50249.1| 195|Drosophila melanogaster CG3395-PA... 127 5e-30
X69677-1|CAB41492.1| 197|Drosophila melanogaster ribosomal prot... 80 1e-15
AY061396-1|AAL28944.1| 137|Drosophila melanogaster LD32106p pro... 72 4e-13
AE014296-1681|AAF50250.1| 137|Drosophila melanogaster CG3395-PB... 72 4e-13
AY113393-1|AAM29398.1| 891|Drosophila melanogaster RE07247p pro... 29 2.5
AE014296-2707|AAF49484.2| 891|Drosophila melanogaster CG4998-PA... 29 2.5
AE014296-2706|ABI31256.1| 1185|Drosophila melanogaster CG4998-PB... 29 2.5
>AE014296-1680|AAN11946.1| 195|Drosophila melanogaster CG3395-PD,
isoform D protein.
Length = 195
Score = 127 bits (307), Expect = 5e-30
Identities = 75/120 (62%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = -1
Query: 418 KDPKRLFXGNALLXSS---GSYWSTXXKTDETRLCAWSED*GLLGASSADAGVQSWPGKS 248
KD KRLF GNALL G + K D L ED L + KS
Sbjct: 67 KDEKRLFQGNALLRRLVRIGVLDESRMKLDYV-LGLKIED--FLERRLQTQVFKLGLAKS 123
Query: 247 IHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 68
IHHAR+LIRQRHIRVRKQVVNIPSF+VRLDS KHIDFSLKSPFGGGRPGRVKRKNL+K Q
Sbjct: 124 IHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLKKNQ 183
Score = 71.7 bits (168), Expect = 4e-13
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = -2
Query: 375 RLVRIGVLXXKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 256
RLVRIGVL +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 81 RLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120
>AE014296-1679|AAF50249.1| 195|Drosophila melanogaster CG3395-PA,
isoform A protein.
Length = 195
Score = 127 bits (307), Expect = 5e-30
Identities = 75/120 (62%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = -1
Query: 418 KDPKRLFXGNALLXSS---GSYWSTXXKTDETRLCAWSED*GLLGASSADAGVQSWPGKS 248
KD KRLF GNALL G + K D L ED L + KS
Sbjct: 67 KDEKRLFQGNALLRRLVRIGVLDESRMKLDYV-LGLKIED--FLERRLQTQVFKLGLAKS 123
Query: 247 IHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 68
IHHAR+LIRQRHIRVRKQVVNIPSF+VRLDS KHIDFSLKSPFGGGRPGRVKRKNL+K Q
Sbjct: 124 IHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLKKNQ 183
Score = 71.7 bits (168), Expect = 4e-13
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = -2
Query: 375 RLVRIGVLXXKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 256
RLVRIGVL +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 81 RLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120
>X69677-1|CAB41492.1| 197|Drosophila melanogaster ribosomal protein
protein.
Length = 197
Score = 80.2 bits (189), Expect = 1e-15
Identities = 53/112 (47%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Frame = -1
Query: 418 KDPKRLFXGNALLXSSGSYWSTXXKTDETRLCAWSED*GLLGASSADAGVQSWPGKSIHH 239
KD KRLF G +L+ E RL A SED GLLGASSADAGVQ+ KSIHH
Sbjct: 66 KDAKRLFQGKSLVRRLVRI-GVLKSPHEARLRAGSEDSGLLGASSADAGVQAGLAKSIHH 124
Query: 238 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHI-DFSLKSPFGGGRPGRVKRK 86
AR+LIRQR + + IPSF+V + +FSLK P RP R +++
Sbjct: 125 ARVLIRQRTFVLASRWSTIPSFVVTPGLPEATSNFSLKMPL-RTRPSRSRQE 175
>AY061396-1|AAL28944.1| 137|Drosophila melanogaster LD32106p
protein.
Length = 137
Score = 71.7 bits (168), Expect = 4e-13
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = -2
Query: 375 RLVRIGVLXXKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 256
RLVRIGVL +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 81 RLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/74 (44%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = -1
Query: 418 KDPKRLFXGNALLXSS---GSYWSTXXKTDETRLCAWSED*GLLGASSADAGVQSWPGKS 248
KD KRLF GNALL G + K D L ED L + KS
Sbjct: 67 KDEKRLFQGNALLRRLVRIGVLDESRMKLDYV-LGLKIED--FLERRLQTQVFKLGLAKS 123
Query: 247 IHHARILIRQRHIR 206
IHHAR+LIRQRHIR
Sbjct: 124 IHHARVLIRQRHIR 137
>AE014296-1681|AAF50250.1| 137|Drosophila melanogaster CG3395-PB,
isoform B protein.
Length = 137
Score = 71.7 bits (168), Expect = 4e-13
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = -2
Query: 375 RLVRIGVLXXKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 256
RLVRIGVL +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 81 RLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/74 (44%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = -1
Query: 418 KDPKRLFXGNALLXSS---GSYWSTXXKTDETRLCAWSED*GLLGASSADAGVQSWPGKS 248
KD KRLF GNALL G + K D L ED L + KS
Sbjct: 67 KDEKRLFQGNALLRRLVRIGVLDESRMKLDYV-LGLKIED--FLERRLQTQVFKLGLAKS 123
Query: 247 IHHARILIRQRHIR 206
IHHAR+LIRQRHIR
Sbjct: 124 IHHARVLIRQRHIR 137
>AY113393-1|AAM29398.1| 891|Drosophila melanogaster RE07247p
protein.
Length = 891
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 217 FAGSKFWHDGWTXQASFEHLRLQTTLQEV 303
F G++ W GW A EH + Q L+EV
Sbjct: 767 FTGARCWTTGWGKDAFGEHGKYQNILKEV 795
>AE014296-2707|AAF49484.2| 891|Drosophila melanogaster CG4998-PA,
isoform A protein.
Length = 891
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 217 FAGSKFWHDGWTXQASFEHLRLQTTLQEV 303
F G++ W GW A EH + Q L+EV
Sbjct: 767 FTGARCWTTGWGKDAFGEHGKYQNILKEV 795
>AE014296-2706|ABI31256.1| 1185|Drosophila melanogaster CG4998-PB,
isoform B protein.
Length = 1185
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 217 FAGSKFWHDGWTXQASFEHLRLQTTLQEV 303
F G++ W GW A EH + Q L+EV
Sbjct: 1061 FTGARCWTTGWGKDAFGEHGKYQNILKEV 1089
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,647,757
Number of Sequences: 53049
Number of extensions: 372754
Number of successful extensions: 898
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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