Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1332
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    27   0.42 
Z49814-1|CAA89968.1|  137|Anopheles gambiae serine proteinase pr...    24   3.9  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    24   5.1  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   5.1  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   6.8  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 27.5 bits (58), Expect = 0.42
 Identities = 18/66 (27%), Positives = 35/66 (53%)
 Frame = -1

Query: 504 IRRLNADVQAETAMKEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQE 325
           +RR   DVQA+ A  ER     SE  + + + A++ E+   +     L  +E+R ++  E
Sbjct: 387 VRRTLQDVQAKQAAIERGMRNASERVTRIQKDARQIEQDLQERNRDGLSQVEQR-KQAVE 445

Query: 324 TGRSRI 307
           T ++++
Sbjct: 446 TEKAQL 451


>Z49814-1|CAA89968.1|  137|Anopheles gambiae serine proteinase
           protein.
          Length = 137

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 151 DDTHKEI-EAESGEVCETLNLCDLVFN 74
           D   KE+ ++ S EVC  +N+CD  FN
Sbjct: 87  DWIEKEVNQSLSYEVCTGVNVCDRKFN 113


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 139 KEIEAESGEVCETLNLCDLVFN 74
           + + A+S  + E L LCD++FN
Sbjct: 59  RRVRAKSKAMTEFLPLCDVLFN 80


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
 Frame = -1

Query: 504 IRRLNADVQAETAMKEREFEWLSETGSSLIEVAKKEEKSY-----SKNTSKQLKDMEERW 340
           +RR   +   E  +KE++ + L        + + KEE+        K+ +KQ+KD     
Sbjct: 354 MRRKEEECSRELNLKEQKRKELYAKQGRGSQFSSKEERDKWIQGELKSLNKQIKDKISHQ 413

Query: 339 RKLQETGRSRIVK 301
            KLQ+  +  I K
Sbjct: 414 NKLQDDLKKDIAK 426


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 378  NTSKQLKDMEERWRKLQETGRSRIVKI 298
            N   +L +  ERW  +QE  R +I K+
Sbjct: 990  NLGMKLLESPERWNSIQEAAR-KITKV 1015


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,146
Number of Sequences: 2352
Number of extensions: 10937
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)